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1.
Barley is one of Ethiopia's major crops. Cultivation is mostly by traditional varieties that are chosen by farmers for their suitability for end-use or their adaptation to specific farming systems. A collection of 155 barley lines was grouped in 13 varieties, according to the name given by the farmers. The collection was evaluated for simple agronomic traits and resistance to barley scald disease. A large level of diversity was found, mainly between varieties, but also within varieties between farms from which the samples originated. In spite of a certain degree of overlapping, these traditional farmer's varieties showed coherence for the characters measured. Earlier maturing varieties were found to be more susceptible to scald, but a number of accessions combined earliness with scald resistance. It is suggested that the traditional variety name be included, next to the physical characters of the collection site, as a parameter to explain the degree of diversity in Ethiopian barley germplasm evaluation. The cultivated area of a number of traditional barley varieties is declining rapidly and special collection missions are needed to preserve this germplasm.  相似文献   

2.
Rice Diversity Collection,Conservation and Management in Northeastern India   总被引：3，自引：0，他引：3  
Rice is the principal crop of northeastern region of India, where a considerable range of diversity exists. The germplasm collection has also unfold the occurrence of large number of rice landraces in the region. Between 1985 and 2002, a total 2639 accessions of rice germplasms including their wild relatives have been collected. Most of these germplasm material have been conserved in the National Gene Bank, New Delhi following their necessary characterization and evaluation. With the establishment of the Regional Gene Bank Module with medium-term storage facilities (6–7°C with 40–45% relative humidity) at Barapani, Meghalaya, the rice germplasm conservation (ex situ) have been initiated in the region.  相似文献   

3.
The Lao People's Democratic Republic (Lao PDR) lieswithin the center of domestication of Asian rice(Oryza sativa L.). Many traditionalvarieties are grown in the rainfed lowland and rainfed uplandecosystems, but there is a danger of genetic erosion, particularly inthe lowlands, as farmers adopt improved varieties. The Lao Ministryof Agriculture and Forestry (MAF) and the InternationalRice Research Institute (IRRI) jointly explored most of therice growing areas between October 1995 and April 2000 and collected13192 samples of cultivated rice, and 237 samples of six wild ricespecies. Cultivated samples were classified according to ecosystem,endosperm type and maturity. The numbers of samples collected fromthe northern, central and southern regions were 5915(44.8%), 4625 (35.1%) and 2652(20.1%) respectively. More samples(55.9%) were collected from the uplands than fromlowland sites. Most samples (85.5%) had glutinousendosperm. Almost half the samples were medium maturing(47.1%), with approximately an equal number of earlyand late maturing forms. Apart from some localized areas whereaccessibility was restricted, the collection is representative of therice genetic resources of the whole country. A genebank formedium-term storage was established near Vientiane. Forlong-term conservation, duplicate samples were sent to theInternational Rice Genebank at IRRI in the Philippines.  相似文献   

4.
Forty-seven samples of date palm (Phoenix dactylifera L.) collected from eight locations in Egypt were studied using four sets of amplified fragment length polymorphism (AFLP) markers with near infrared fluorescence labeled primers. These samples belonged to 21 named accessions and 9 of unknown pedigrees. A total of 350 bands were scored and 233 (66.6%) were polymorphic. Twenty-seven Egyptian accessions and ‘Medjool’and ‘Deglet Noor’accessions from California could beclassified into the major cluster. This major cluster may represent a major group of date palm germplasm in North Africa. There were four other clusters, each containing one or two accessions. The variety ‘Halawy’and one accession of unknown provenance were most likely from hybridization between two clusters. Six groups of accessions of which had the same names, revealed similar but not identical AFLP profiles suggesting these accessions might derive from seedlings rather thanthrough clonal offshoot propagation.  相似文献   

5.
Ambiguity exists about the level of genetic diversity represented by farmer crop varieties, how it develops over time and how it relates to the diversity comprised by formal varieties. As part of an interdisciplinary technological/sociological study on farmer management of gene flow, upland rice (Oryza sativa L.) and late millet (Pennisetum glaucum (L.) R.Br.) from The Gambia were investigated for morphological and molecular variation. The goal of these analyses was to obtain insight into the level of crop genetic diversity of farmer’s materials planted in several case study villages in The Gambia. For both crops, samples were collected from villages and various research institutes. Based on variety names, different rice and millet varieties were expected to be used in different villages. In fact, there was a large overlap in genetic diversity for both crops, masked by the use of synonyms. The considerable similarity in rice genetic diversity between villages most likely results from the exchange of varieties between farmers. For millet this seems the result of development of varieties from the same gene pool. Some farmer varieties of rice, however, are apparent hybrid forms between the species O. sativa and O. glaberrima Steud., and farmer varieties in general displayed higher levels of genetic diversity than formal varieties. This indicates that, for rice, genetic diversity develops in farmers’ fields and may have potential use in formal breeding programs.  相似文献   

6.
Phenotypic variation of agronomic characters in aromatic rice (Oryza sativa L.) was analyzed in order to elucidate the genetic diversity of the populations of rice landraces. Thirteen populations in Namdinh province, in the Red River Delta of Vietnam, were studied in both of farmers fields and an experimental field. Only small differences were found in agronomic characters among the populations, including populations containing different varieties. Variations among the populations in the frequency distributions of several characters suggested different degrees of diversity among the populations even among populations with the same variety name. The phenotypic profiles of farmers fields were different from those in an experimental field suggesting the environmental differences between them. One variety cultivated in the Myloc district had different phenotypic characters from the other varieties in the Haihau district more clearly in the experimental field. Since the small phenotypic variation in each of farm might be due to the genetic drift and selection by the farmers, on farm conservation of the landraces of rice is considered to be under a force to decrease phenotypic diversity. The present study suggests that the targeting several farms with different phenotypic profiles contribute to the conservation of regional genetic diversity of the landraces of rice.  相似文献   

7.
铝毒是酸性土壤中限制植物生长的主要因子之一,探讨植物耐铝特性与机理对提高酸性土壤植物生产力具有重要意义。通过一系列生理和分子生物学试验,主要探究了Nipponbare和Kasalath两个水稻品种的铝耐性差异。结果发现,与Kasalath相比,Nipponbare在铝胁迫下不仅拥有较长的根伸长,且根尖铝含量较少,表明Nipponbare是水稻铝耐性品种,而Kasalath为铝敏感品种。进一步研究发现,水稻根尖控制铝吸收的NRAT1基因在Kasalath中表达量更高,表明,NRAT1基因的高表达量可能是导致铝敏感品种Kasalath根尖铝含量较高的主要原因。此外,铝胁迫下,Nipponbare根系柠檬酸的分泌量显著高于Kasalath。而且,水稻中控制柠檬酸分泌的OsFRDL4基因在铝耐性品种Nipponbare中的表达量显著高于Kasalath,由此证明,柠檬酸在这两个品种水稻耐铝途径中可能起着重要的作用,并且,该品种水稻可以通过调控OsFRDL4基因的表达量来控制柠檬酸的分泌量。本研究中还分析了其他4个与铝胁迫相关的基因,但并未发现明显的相关性,值得进一步的探究。  相似文献   

8.
Target region amplification polymorphism (TRAP) markers were used to assess genetic variability among 38 germplasm accessions and 10 commercial hybrids of spinach (Spinacia oleracea L.), an economically important leafy vegetable crop in many countries. Germplasm accessions with different geographic origins and 10 commercial hybrids were examined. For assessing genetic diversity within accessions, DNA was extracted from 12 individual seedlings from six germplasm accessions and two hybrids. A relatively high level of polymorphism was found within accessions based on 59 polymorphic TRAP markers generated from one fixed primer derived from the Arabidopsis-like telomere repeat sequence and two arbitrary primers. For evaluating interaccession variability, DNA was extracted from a bulk of six to 13 seedlings of each accession. Of the 492 fragments amplified by 12 primer combinations, 96 (19.5%) were polymorphic and discriminated the 48 accessions from each other. The average pair-wise genetic similarity coefficient (Dice) was 57.5% with a range from 23.2 to 85.3%. A dendrogram indicated that the genetic relationships among the accessions were not highly associated with the geographic locations in which the germplasms were collected. The seven commercial hybrids were grouped in three separate clusters, suggesting that the phenotype-based breeding activities tended to reduce the genetic variability. This preliminary study demonstrated that TRAP markers are effective for fingerprinting and evaluating genetic variability among spinach germplasms. Mention of trade names or commercial products in this article is solely for the purpose of providing specific information and does not imply recommendation or endorsement by the US Department of Agriculture. The U.S. Government's right to retain a non-exclusive, royalty-free license in and to any copyright is acknowledged.  相似文献   

9.
The objective of the current research was to investigate the status of rice genetic resources in post-war Sierra Leone using both morphological and amplified fragment length polymorphism (AFLP) data. Specifically, we aimed at investigating farmers’ rice genetic resources for homogeneity and differentiation, and at examining the genetic identity of similarly named varieties, including varieties within Sierra Leone, and between Sierra Leone and Guinea. This research was also motivated by the assumption that genetic erosion might have occurred as a result of the civil war. To determine the level of diversity and genetic relationships among farmers’ varieties of rice recently collected in Sierra Leone, two methods were used using subsets of the collected samples: (1) Using morphological data, 74 samples of 29 different varieties were analysed to investigate the relationship between (a) varieties grown in two districts in Sierra Leone, and (b) the two main cultivated species, Oryza sativa and Oryza glaberrima. A dendrogram largely clustered the varieties according to region and to the species to which the varieties belonged. (2) Using AFLP data, three separate investigations were conducted: (a) 33 samples of 10 varieties were investigated to evaluate diversity within and between varieties. The results indicated that the rice varieties possess different levels of intra-variety variation, whereas inter-variety diversity was high enough to distinguish one variety from the other. In particular, an AMOVA analysis revealed that 38 % of the total variation occurred within varieties, and 62 % between varieties. (b) 37 samples of 18 different varieties were investigated to determine the consistency of naming of varieties by farmers. The results showed that there was consistency in the naming by farmers of traditional varieties, but inconsistency in the naming of newly acquired varieties and cultivars. (c) 12 samples were investigated to check the identity of varieties carrying identical names collected in two separate regions, Sierra Leone and the neighbouring country of Guinea. The results indicated no close genetic relationships between the varieties found in Sierra Leone and Guinea despite similarities in the names given to these varieties by farmers, indicating the influence of different cultivation practices in the two countries.  相似文献   

10.
Oryza granulata, an upland wild rice species, represents an unique germplasm for possessing abilities of tolerance to shade and drought, immune to bacterial blight and resistance to brown planthopper. Although low degree of genetic variability has been revealed within its populations, little genetic information at the species level is available in determining rational conservation strategies. Here we used dominant DNA marker random amplified polymorphism DNA (RAPD) to assess the genetic variability among 23 accessions of O. granulata that collected from main distribution areas worldwide. Twenty decamer primers generated a total of 243 bands, with 83.5% of them (203 bands) being polymorphic. Calculation of Shannon index of diversity revealed an average value of 0.42 ± 0.25, indicating that O. granulata maintains a relatively high degree of genetic diversity on the species level. Analysis of genetic dissimilarity (GD) showed that genetic differentiation occurred among studied accessions, which supports the feasibility of current ex situ conservation strategies. We also suggested that information based on population studies, which could be achieved by international co-operation, is needed to conserve this widespread germplasm more effectively.  相似文献   

11.
Greater insight into the dynamics of genetic resources of crop plants is needed in order to pinpoint detrimental evolutionary patterns and draw up conservation priorities. Temporal evolution of rice genetic diversity was monitored in Maritime Guinea where subsistence-oriented agriculture prevails. Diachronic comparison was performed between samples collected in six villages during the 1979/1982-period and in 2003, based on the names and number of varieties inventoried and the polymorphism of microsatellite markers. The number of varieties appeared not to be comparable between the two dates, due to differences in the collection methods. The varietal composition had evolved very substantially between the two collection dates. Many long-duration varieties present in 1979/1982 had been abandoned and several improved varieties had been introduced. The mean number of alleles per locus and per accession was significantly higher in accessions collected in 2003. Pairwise comparisons of the mean number of alleles per locus in 1979/1982–2003 homonymous accession pairs indicated higher intra-accession diversity for the 2003 collections. Genetic differentiation, measured with the F ST values, was very high and significant for more than 80% of these pairs of accessions. The overall genetic differentiation between accessions from the two collections dates was also significant. Significant changes were also observed for allelic composition. However, alleles specific of each collection date had much lower frequency, compared to alleles common to the two collection dates. These results suggest that rice genetic diversity in Maritime Guinea has been maintained or even enhanced. Old collections of crop genetic resources are often not exhaustive enough to undertake perfect diachronic comparison. New methods to utilize this historical data for diversity monitoring are needed.  相似文献   

12.
The Jeypore tract of Orissa is one of the secondary centers of origin of cultivated rice. Recent exploration to that tract has resulted in a collection of 120 accessions of upland rice germplasm. They have been conserved in both National active collection and base collection centres for further utilisation as and when it will be required. Also a historical perspective on the genetical diversity of rice germplasm of the region has been highlighted. The characterization data revealed enormous morphological as well as agronomical variability among the landraces.  相似文献   

13.
The Western Himalayan region of India possesses rich genetic diversity of rice (Oryza sativa L.). Rice landraces having withstood the rigors of biotic and abiotic stresses, suit to the local conditions of farms and reflect socio-cultural preferences can still be found in crop fields located distantly in rural and tribal areas. This region is known for growing World fame basmati in the foot hills and many varieties of red rices grown at higher elevations, known for cold tolerance and medicinal properties. Genetic resources of rice were collected for about 8 years (1999–2006) and 1069 germplasm accessions including 154 named landraces were collected. Prominent landraces such as Begumi, Ramjwain, Thapachini, Naurang, Hansraj, Tilakchandan, Lalsati, Jhini, Mushakbudji, Jattoo, Barpasso, Qadirbeigh, Safedbrez, Shahie known for their special quality attributes were collected. The change in land use, cropping patterns and aggressive introduction of modern varieties in the region has resulted in the loss of a large number of landraces especially from irrigated lands. The present paper looks at the status of rice genetic resources, genetic variability, genetic erosion and future strategies to conserve rice germplasm on farm and to maximize its use in rice breeding.  相似文献   

14.
Genetic Diversity in AA and CC Genome Oryza Species in Southern South Asia   总被引：3，自引：0，他引：3  
The CC genome of Oryza is found in nine species of Oryza that are distributed on all continents having a tropical climate. Three diploid Oryza species with CC genome are found in Africa and Asia to Papua New Guinea. In southern South Asia these three CC genome diploid species can be found, O. eichingeri and O. rhizomatis in Sri Lanka and O. officinalis in India. AA genome wild relatives of rice are also found in the same geographic region. Germplasm of both diploid CC and AA genome Oryza germplasm has recently been collected from Sri Lanka. AFLP analysis was used to compare the genetic diversity of the two Oryza genomes from a similar geographic region in southern South Asia. In addition, the diploid CC Oryza germplasm was also analyzed by RAPD and SSR methodologies and the combined results were analyzed. The results show that in southern South Asia the diploid CC genome species have a high level of genetic diversity compared to the diploid AA genome species. Molecular marker analysis revealed that populations of O. rhizomatis from northern and southeastern Sri Lanka are genetically differentiated. One accession of O. rhizomatis was aligned with O. eichingeri. This accession was collected from the site of O. rhizomatis that is the closest to a population of O. eichingeri. O. eichingeri showed lower genetic diversity than the other two diploid Oryza CC genome species. O. officinalis accessions from Assam, India, and China were genetically less diverged from O. eichingeri and O. rhizomatis than two accessions of O. officinalis from Kerala state, India. The first two authors contributed equally to this research  相似文献   

15.
Although common bean (Phaseolus vulgaris L.) is cultivated throughout India, the Himalayas hold largest diversity of bean germplasm. No studies on characterization of phaseolin types on this germplasm have been conducted earlier. In order to determine whether the common bean cultivars collected from various areas in the Northern Himalayas represent introductions from the Central American and Andean domestication centers or are local domesticates, we have analyzed the electrophoretic variation (SDS-PAGE) of phaseolin types in several bean accessions. A few species of Vigna were also included in this study to determine whether phaseolin (vignin in Vigna) patterns can be used to resolve the Phaseolus–Vigna complex. The present investigation on phaseolin (globulin) patterns of Phaseolus vulgaris and Vigna spp. clearly shows much variability in globulin patterns. Three new types of phaseolin patterns were recorded. An attempt to resolve phylogenetic problems in this complex was made using the phaseolin data.  相似文献   

16.
The objectives of this study were: (1) to analyse the physico-chemical characteristics of 48 Dioscorea alata varieties representing a core sample of the Vanuatu national germplasm collection; (2) to relate those characteristics with the varieties eating quality; and (3) to assess the possibility of selecting varieties according to their chemotype. Overall, 331 accessions were collected from 15 different islands of Vanuatu, planted in an ex situ germplasm collection and described during 3 years. The 48 varieties included in the core sample were selected according to their island of origin, eating quality, tuber shape, tuber flesh colour and morphotype. Analyses of their tubers were made for percentage dry matter, starch, amylose, lipids, minerals, proteins, sugars and gelatinisation temperature range. Significant variation exists for each of these characteristics except for gelatinisation temperature. Varieties with good eating quality are characterised with high dry matter, starch and amylose contents. Chemotypes appear to be genetically controlled and further screening of germplasm and/or breeding will have to take into consideration these characteristics, important for farmers’ adoption.  相似文献   

17.
Germplasm from one or more populations of each taxon of the Macaronesian endemic genus Argyranthemum Sch. Bip. (Asteraceae: Anthemideae) was collected in the Canary Islands, Madeira, the Selvagens Islands and the Desertas Islands. A total of 253 germplasm samples was collected and they are conserved ex situ at the seed bank of Centro de Investigación y Tecnología Agraria de Canarias (Tenerife, Canary Islands, Spain). Duplicates are held at the germplasm bank of Escuela Técnica Superior de Ingenieros Agrónomos (Madrid, Spain). A preliminary account of the ecogeography of the genus based on field observation is provided. In situ conservation strategies are discussed, particularly with regard to the occurrence of hybridization within Argyranthemum.Abbreviations IUCN international Union for Conservation of Nature - CITA Centro de Investigación y Tecnología Agraria de Canarias - ETSIA Escuela Técnica Superior de Ingenieros Agrónomos, Madrid  相似文献   

18.
Cultivated Chinese wheat germplasm has been a valuable genetic resourcein international plant breeding. Landraces endemic to China are a geneticresource that is distinct from other wheat germplasm. Patterns of geneticdiversity among cultivated Chinese accessions and relationship to othergermplasm pools are unknown, despite the proven value and potential novelty. Theobjective of this work was to determine the level of genetic diversity withinimproved Chinese germplasm in the context of several other wheat germplasmpools. We analyzed a set of improved accessions cultivated from the 1940s to the1990s in Shaanxi province, China, using six simple sequence repeat (SSR) primerpairs and 30 restriction fragment length polymorphism - probe enzymecombinations (RFLP-PEC) previously used to characterize 21 geographically basedgermplasm pools. Shaanxi germplasm consists of three groups based on foreignintroductions from Italy, Australia, Denmark, and Russia. There was a decreasein genetic diversity among Shaanxi accessions cultivated in the 1970s and 1980sto the 1990s, and accession classifications based on primary decade ofcultivation were found to be significantly undifferentiated. The analysis of themean genetic distance among 22 geographically based pools of germplasm suggestsseveral regions are significantly undifferentiated. A vast majority of the totalamount of variation was found within pools; therefore, pools appear to belargely differentiated based on small differences in band relative frequency andfew if any unique bands. Previous studies have identified some Chinese landracepools as morphologically and genetically unique. The Shaanxi pool does not havethe same unique morphological or genetic features, nor is it more similar to thelandrace pools than other improved germplasm pools.  相似文献   

19.
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20.
The purpose of this study was to characterize the Irano-Caucasian apricot germplasm that was collected in Anatolia, Turkey. Fifteen (pomological, phenological, and yield) parameters were studied in this germplasm, consisting of 128 apricot cultivars and types. A wide variation was found in harvest season, fruit yield, total solids soluble (TSS), total acidity, fruit, pit, and kernel mass. Most of the cultivars and types had a relatively small fruit size; only seven had a fruit mass ≥50 g. In general, fruits had yellow skin ground color and flesh color as well as mostly sweet kernels and high TSS. While there was a high correlation between fruit, pit and kernel mass and also between TSS and total acidity, a low or no significant correlation was determined between other pomological or phenological characteristics. The Levent apricot type possessed a substantially late ripening with a total period of 190–200 days for fruit development, a characteristic that makes this apricot type highly suitable for breeding studies.  相似文献   

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