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1.
The sweetpotato whitefly, Bemisia tabaci Genn., is a major pest of tomato (Solanum lycopersicum) and other crops throughout the tropics and subtropics. The objectives of this study were to characterize 255 accessions of S. galapagense, S. cheesmaniae and S. pimpinellifolium for trichome types, and to evaluate selected accessions with high densities of glandular trichomes for resistance to whitefly. Twenty-two accessions classified as either sparse or abundant for type IV trichomes were selected and evaluated for numbers of adults, eggs, nymphs, and puparium of whitefly in choice bioassays, for adult mortality and egg numbers in no-choice bioassays, and for densities of type I, IV, V, and VI trichomes. The highest whitefly resistance was detected in S. galapagense accessions VI063177 and VI037239 based on choice and no-choice bioassays. In addition, we found high levels of whitefly resistance in S. cheesmaniae accession VI037240 based on the choice bioassay and in S. pimpinellifolium accession VI030462 based on the no-choice bioassay. Whitefly resistance in VI037240 and VI030462 is noteworthy because these species are closely related to cultivated tomato and introgression of whitefly resistance should be relatively straightforward. High densities of type IV trichomes and low densities of type V trichomes were associated with reduced numbers of whitefly adults, nymphs, puparium, and eggs in the choice bioassay and with high adult whitefly mortality in the no-choice bioassay. Preliminary trichome analysis followed by choice and no-choice assays facilitated rapid identification of whitefly-resistant accessions from a large pool of candidates of different species.  相似文献   

2.
Tomato wild relatives are important sources of resistance to many pests of cultivated tomato [Solanum lycopersicum L. (syn. Lycopersicon esculentum Mill.)]. Eleven wild tomato accessions previously identified at AVRDC—The World Vegetable Center as resistant to Bemisia tabaci were evaluated for resistance to the two-spotted spider mite [Tetranychus urticae (Koch.)] based on egg numbers using the leaf disc and Tanglefoot no-choice bioassays, and damage scores in choice bioassays. Highest resistance based on choice and no-choice bioassays was identified in AVRDC S. galapagense accessions VI057400, VI045262, VI037869 and VI037239, and S. cheesmaniae accession VI037240, all of which are new sources of T. urticae resistance. In addition, S. pimpinellifolium accession VI030462 exhibited resistance only in the no-choice bioassay based on egg numbers. Resistance to T. urticae based on the number of eggs from the no-choice bioassays was positively correlated with density of type IV glandular trichomes and negatively correlated with densities of type V trichomes. All resistant accessions accumulated high levels of total acylsugars, which were positively associated with type IV trichomes. There was a significant negative relationship between acylsugar content and T. urticae egg numbers from the no-choice bioassays. There was high correlation between the results from the leaf disc test and the Tanglefoot no-choice bioassay. These findings support the possible presence of broad-based insect and mite resistance in accessions closely related to cultivated tomato.  相似文献   

3.
Maize (Zea mays L.) and Asian rice (Oryza sativa L.), two most important cereals for human nutrition, have undergone strong artificial selection during a long period of time. Currently, a number of genes with stronger signals of selection have been identified through combining genomic and population genetic approach, but research on artificial selection of maize and Asian rice is scarcely done from the perspective of phenotypic difference of a number of agronomic traits. In this study, such an investigation was carried out on the basis of 179 published studies about phenotypic quantitative trait locus (QTL) mapping of Zea and Oryza species via QTL sign test. At the overall level, the proportions of antagonistic QTLs of Zea and Oryza species were 0.2446 and 0.2382 respectively, deviating significantly from neutrality. It indicated that these two genera have undergone similar selection strength during their evolutionary process. A previous study showed that 4 traits undergoing the directional selection during domestication were identified in Asian rice via QTL sign test, and 16 individual traits in Asian rice and 38 ones in maize that newly detected in this study deviated significantly from neutrality as well, demonstrating the dominant influence of artificial selection on them. Moreover, analysis of different categories of cross type including O. sativa × Oryza rufipogon (perennial and annual forms) crosses, maize × teosinte (Zea mays subsp. parviglumis) crosses, O. sativa × O. sativa crosses, and maize × maize crosses showed that their proportions of antagonistic QTLs were 0.1869, 0.1467, 0.2649, and 0.2618 respectively. These results revealed that selection strength of domestication is significantly stronger than that of modern genetic improvement. However, interestingly, the proportion of antagonistic QTLs (0.1591) in maize × maize with long-term selection was very similar to that (0.1467) in the maize × teosinte (Zea mays subsp. parviglumis) crosses. It suggested that some favorable traits could be cultivated within a few decades if we carry out strong selection. In addition, the proportions of antagonistic QTLs of the widely cultivated hybrids of rice (Minghui 63 × Zhenshan 97) and maize (Zheng 58 × Chang 7-2) in China were 0.309 and 0.3472 respectively. It suggested that selection during modern genetic improvement has significantly acted on them.  相似文献   

4.
The genus Zanthoxylum, belonging to Rutaceae, has a long history of cultivation both for economic and chemical values in China. To effectively conserve and sustainably utilize this genus resource, a study on genetic diversity and relationships of Zanthoxylum germplasms was carried out by employing SRAP markers. We used 16 primer combinations to assess genetic variations and relationships among 175 accessions from eight cultivated provenances, including Shandong, Henan, Shanxi, Shaanxi, Gansu, Sichuan, Guizhou and Yunnan. A total of 145 clear repetitive and intense bands were yielded, and the percentage of polymorphic bands was 100 % for per primer combination, indicating a relatively high diversity among Zanthoxylum germplasms. From a geographic perspective, the highest genetic diversity level was observed within Guizhou provenance (N a  = 1.97, Ne = 1.52, H = 0.31, I = 0.46) while Henan provenance had the lowest genetic diversity (N a  = 1.68, Ne = 1.45, H = 0.25, I = 0.37). Based on AMOVA results, the abundant genetic variation was mainly caused by variation of intra-provenances (84.96 %), rather than among provenances (15.038 %). The results indicated low genetic differentiation (G st  = 0.133) and high gene flow (N m  = 3.2605) among provenances. The neighbor-joining tree revealed that the 175 accessions could be divided into four groups, and groupings indicated a divergence between the cultivated accessions of Zanthoxylum bungeanum Maxim. and Z. armatum DC. Moreover, three accessions of Z. piperitum DC. var. inerme without prickles introduced from Japan gathered one cluster. Cluster IV is composed of accessions of different geographical origin, including 11 wild species and 10 cultivated accessions of Z. bungeanum. The cluster analysis also reflected a relatively close relationship between the geographical origins and the classification of accessions in cluster I. Structure analysis indicated that collected Zanthoxylum accessions could be divided into two major groups. The information obtained from our research would benefit to make use of Zanthoxylum germplasms and assist the management of a Zanthoxylum germplasms collection.  相似文献   

5.
Aegilops geniculata Roth, a wild relative of wheat (2n = 4x = 28, genome UUMM), is distributed over the Mediterranean basin and nearby areas. The species consists of two subspecies, subsp. geniculata and subsp. gibberosa (Zhuk.) Hammer. The former is distributed over the whole species area and has been genetically analyzed, and the latter is endemic to Spain and North Africa and has not been genetically evaluated. In this study, to clarify the genetic variation and delineation of the two subspecies from a biosystematic viewpoint, morphological variation among 23 accessions of subsp. geniculata and three of subsp. gibberosa and chromosome pairing at meiosis and fertility in their intra- and inter-subspecific F1 hybrids were examined. A principal component analysis based on the 11 spike characteristics clearly divided the 26 accessions into two groups representing the two subspecies. The inter-subspecific F1 hybrids showed significantly lower frequencies of chromosome pairing, significantly higher frequencies of multivalents, and significantly lower fertilities relative to those of the intra-subspecific F1 hybrids. It was concluded that wide-ranging cytogenetic variation is included in subsp. geniculata, that subsp. gibberosa, the intra-subspecific variation of which is small, is morphologically and cytogenetically differentiated from subsp. geniculata beyond the range of the intra-subspecific variation of subsp. geniculata, and that the two subspecies are effectively isolated reproductively by hybrid sterility. The results strongly suggested that western North Africa is one of the important diversity centers of Ae. geniculata, where two subspecies were differentiated in the past and grow together in the present.  相似文献   

6.
Bacterial soft rot caused by Pectobacterium and Dickeya species can cause major losses to the potato (Solanum tuberosum L.) industry, mostly due to tuber rot in storage. There are few germplasm resources for soft rot resistance breeding. Here, we introduce a resistant diploid wild potato relative, M6, identified with a new disease scoring method. M6 shows a barrier-like resistance mechanism which appears to be a rapid form of wound healing. We found that scoring for this lesion type is correlated with soft rot resistance. This new resource for resistance and the new scoring method can enhance efforts to breed for resistance to bacterial soft rot and improve evaluation efforts.  相似文献   

7.
Avocado (Persea americana Mill.) is a subtropical domesticated fruit tree indigenous to Mesoamerica. It is a member of the Lauraceae family and is separated into three horticultural races (Guatemalan, Mexican, and West Indian) mainly corresponding to their ecological adaptation, botanical, and physiological traits. Main objectives of this study were to characterize the population structure, genetic diversity, and horticultural race of a total of 354 Persea spp. trees whose origin is as follow: 221 trees [P. americana, (218), P. nubigena (2) and P. krugii (1)] from the USDA-ARS-Subtropical Horticultural Research Station, Miami; 105 trees from the Fairchild Farm [P. americana (104) and P. schiedeana (1)], and 28 trees collected in Mexico [P. schiedeana (23) and P. americana (5)]. The complexity of their interracial admixture; as well as mislabeling frequency was also evaluated. Molecular marker analysis utilizing a set of 55 simple sequence repeat (SSR) markers amplified a total of 869 alleles with a mean number of alleles per locus of 15.8 and average polymorphism information content value of 0.71, indicating a high variability in the allele frequency for the collection. Significant deviations from Hardy–Weinberg equilibrium were identified after Bonferroni correction for a large number of loci (48; 87%) due to the presence of null alleles. The main source of variation for this population was found to be within individuals (66.84%), with 19.30% variation among populations, and 13.86% variation among individuals within populations. Moreover, population specific inbreeding indices (F IS ) were calculated for West Indian, Guatemalan, and Mexican [(0.1918; p value 0.0000), (0.1879; p-value 0.0000), (0.0925; p-value 0.0022)], respectively. Bayesian analysis divided the individual genotypes into groups associated with the Guatemalan, Mexican, West Indian races; interracial admixture; complex hybrids and P. schiedeana species. Also, results of the multivariate clustering method (PCA) and genetic distance analyses calculated among all possible individual combinations within the SSR diversity data agreed with Bayesian or Structure analyses results. The 55 SSRs provided complete resolution of all individuals and the estimated mislabeling error was approximately 0.28%.  相似文献   

8.
Lima bean (Phaseolus lunatus L.) is an important food source in Brazil, especially in the northeast region, where its production and consumption are high. The goals of the present study were to estimate natural outcrossing rates and genetic diversity levels of Lima bean from Brazil, using ten microsatellite loci to obtain information for their conservation and breeding. Fourteen accessions were selected from an experiment in field with open-pollinated and with the presence of pollinating insects. Twelve seeds of each of the 14 selected accessions were grown in screenhouse for tissue harvest and DNA extraction. The multilocus model was used to determine the reproductive system. The outcrossing rate was 38.1 % (tm = 0.381; ts = 0.078), and the results indicated a mixed mating system with a predominance of selfing (1 ? tm = 61.9 %). The biparental inbreeding rate was high (t m  ? t s  = 0.303) and the multilocus correlated paternity was quite high (r p(m) = 0.889), indicating that the progeny was mostly composed of full sibs. The average effective number of pollen donors per maternal plant (N ep ) was low (1.12), and the fixation index for maternal genotypes (F m ) was 0.945, indicating that most genitors resulted from inbreeding. The studied families presented considerable genetic variability: A = 6.10;  %P = 30; H e  = 0.60 and H o  = 0.077. Total diversity was high (H T = 0.596), and a portion was distributed within families (H S = 0.058). In addition, diversity was higher between families (D ST = 0.538), and genetic differentiation was high (G ST = 0.902). The results presented here can be used in the implementation of Lima bean conservation and breeding programs in Brazil.  相似文献   

9.

Purpose

There is a paucity of data regarding the multiple timescale variations of heterotrophic respiration (R H) and autotrophic respiration (R A) as well as the primary controlling factors. The objective of this study is to find the temporal variations of total soil respiration (R S) and its components, revealing the driving factors at different timescales.

Materials and methods

A trenching method was used to distinguish R S, R H, and R A in a spruce-fir valley forest in northeastern China. We used the closed dynamic chamber method to measure the soil respiration rate. Analyses of R S, R H, and R A in relation to biotic and abiotic factors were conducted to realize the temporal variations at different timescales.

Results and discussion

Only R S and R H showed a distinct diurnal variation and soil temperature (T S) can explain 68 and 59 % of the daily variation, respectively. R S, R H, and R A showed a pronounced, single peak curve seasonally, and T S can explain 11–95 % of the seasonal variation. Soil moisture (W S) maintained at a relatively high level and was not related to R S, R H, or R A on a seasonal scale, and there was no significant relationship between the seasonal R S, R A, and root biomass. However, for 5 years, only the mean R A of the growing season was significantly related to the mean W S, which can explain 39 % of the inter-annual variation of R A. The annual variations of litterfall and the relative growth rate of stems were not related to R S, R H, or R A. The contribution of R H to R S was larger, and the temperature sensitivity was 2.01–3.71 for R S, 1.90–3.08 for R H, and 2.20–5.65 for R A.

Conclusions

R S, R H, and R A show different temporal variations at multiple timescales. When W S is not restricted, T S is the primary driving factor of daily and seasonal variation of R S and R H. In this site, R H accounts for a large proportion of R S and plays a crucial role in determining the magnitude and temporal variation of R S.
  相似文献   

10.
Genetic basis of long shelf life and variability into Penjar tomato   总被引：1，自引：0，他引：1  
Penjar tomato is a varietal type cultivated in northeast Spain that characteristically has a long shelf life, small fruit, and wide morphological variability among cultivars. To determine the genetic basis for the long shelf life in the Penjar varietal type and to describe the genetic background and agromorphologic characteristics of the group, we studied 27 Penjar accessions representative of the entire range of variation in traits related to agronomic behavior, fruit morphology, and sensory quality. We found that the long shelf life of Penjar (mean: 126.8 days) is due to the ripening mutant alcobaça (alc), and the molecular basis of this mutation is the replacement of thymine by adenine in position 317 of the coding sequence of the NAC.NOR gene; thus, alcobaça (alc) is an allele of non-ripening (nor). The amplified fragment length polymorphism (AFLP) study found 18.07% polymorphic loci within the Penjar varietal type, which is higher than usual in landraces. The variation in agronomic and morphologic traits between accessions was also very high; thus, the heterogeneity of the Penjar group probably results from the introduction of the allele alc in distinct landraces. Our results also show that in germplasm containing the alc mutation shelf life is negatively correlated with fruit size (weight, width, length, and number of locules); thus, the predominance of small fruit within the varietal type is probably the result of this trait being dragged along in the selection for long shelf life.  相似文献   

11.
Exogenous application of methyl jasmonate (MeJA) can induce anatomical and chemical changes that are components of defence responses in plants. Particularly, MeJA is well‐known to increase leaf trichome density to protect against insect herbivory, but surprisingly little is known about the effects of MeJA on other leaf properties and plant growth. Using sunflower (Helianthus annuus), tomato (Solanum lycopersicum), and soybean (Glycine max) treated with 0.0, 0.1, 0.5, 1.0, and 2.5 mM MeJA, we examined changes in leaf trichome density, stomatal density, cuticle thickness, cuticle composition, plant height, and biomass production. For all three plant species, MeJA (especially at the higher concentrations) caused significant decreases in plant height (up to 39%) and biomass (up to 79%). MeJA caused substantial increases in leaf trichome density (being 1.3–3.5‐times higher) in all three species, with the magnitude of these effects increasing with MeJA concentration. However, we also observed that MeJA resulted in significant changes in cuticle composition and thickness, and stomatal density, although the magnitude of these changes was smaller relative to changes in trichome density. Specifically, high concentrations of MeJA increased the relative content of phenolic compounds and cutin in leaf cuticle while decreasing the relative content of polysaccharide. The changes in stomatal density varied with plant species and MeJA concentration. Also, MeJA increased cuticle thickness in tomato but decreased that in sunflower and soybean. Thus, studies investigating MeJA should also consider the importance of changes in other leaf properties and plant growth.  相似文献   

12.
Potato wild relatives are important sources of novel variation for the genetic improvement of the cultivated potato. Consequently, many natural populations have been sampled and were deposited as accessions in gene banks around the world. Here we investigate to what extent the genetic variation of Bolivian wild potato species is maintained under gene bank conditions and how this diversity relates to that of current in situ populations. For this purpose, materials from seven potato species were screened for microsatellite variation. Genetic changes between different generations of ex situ germplasm were not observed for Solanum leptophyes and S. megistacrolobum, but were detected for S. neocardenasii and S. okadae, while each of the species S. acaule, S. avilesii and S. berthaultii showed stability in some cases and genetic change in others. The observed changes were ascribed to genetic drift and contamination resulting from human error during regeneration. Re-collected populations of six of the studied species showed highly significant genetic differences with the ex situ accessions that, apart from changes during ex situ maintenance, are most likely to be attributed to sampling effects during collecting and in situ genetic changes over time. The implications of the results for ex situ and in situ conservation strategies of wild potato species are discussed.  相似文献   

13.
The seasonal changes in the contents and compositions of n-alkanes and n-methyl ketones have been studied in typical soddy-podzolic soils (Albic Retisols (Ochric)) under lime forests in the Losiny Ostrov National Park, Moscow. In the humus horizons, the reserves (about 370 mg/m2) of odd n-alkanes with the chain length of C25–C35—the biomarkers of terrestrial vegetation—are 4–5 times below their amount entering with the leaf falloff in autumn. A noticeable contribution of microbial biomass hydrocarbons to the lipid fraction in the AY and AYel horizons manifests itself in the increased fraction of odd and medium-chain (<C25) homologues (OEP = 4–6, LSR = 5–7) in the spectrum of n-alkanes. The lowest content of methyl ketones and odd n-alkanes was observed immediately after the winter period (OEP = 22, A/K = 21–170). In the EL and BT horizons, the n-alkane fraction of organic matter and the relative content of high molecularweight n-alkanes more resistant to microbial destruction (C33, C35) increases by 3–4 times in comparison with that in the abovelying horizons, and the type of distribution of n-alkanes by the carbon chain length changes: the dominance of odd homologues is absent; in the EL horizon, OEP = 1.  相似文献   

14.
Genetic diversity and relationships within and among nine species of Coffea, one species of Psilanthus and the Piatã hybrid from the Coffee Germplasm Collection of Instituto Agronômico de Campinas (IAC), Brazil were assessed using RAPD markers. Genetic diversity and relationships were evaluated by proportion of polymorphic loci (P), Shannon’s genetic index (H′ and G′ST) and clustering analysis. The overall RAPD variation among all accessions was mostly partitioned between rather than within species. However, C. canephora and C. liberica showed a high genetic diversity within the species (\({\underline{\hbox{H}'}} \) sp = 0.414 and \({\underline{\hbox{H}'}} \) sp = 0.380, respectively) and this was highly structured (high \({\underline{\hbox{G}'}} \) ST). Genetic diversity from C. congensis and C. arabica was also structured, but with lower levels of genetic diversity (\({\underline{\hbox{H}'}} \) sp = 0.218 and \({\underline{\hbox{H}'}} \) sp = 0.126, respectively). The results were consistent with agronomic and molecular studies and demonstrated that the IAC Coffea Collection is representative of the phylogenetic structure observed in the genera. This study devises sampling strategies for coffee germplasm collections and provides genetic diversity parameters for future comparisons among them.  相似文献   

15.
The present study investigated genetic diversity, structure and hybridization in a collection of the endangered wild pear species Pyrus pyraster (L.) Burgd. A total of 278 putative ‘true type’ P. pyraster trees originating from seven populations in the federal state of Saxony in Germany were analyzed along with 35 pear cultivars commonly cultivated in Saxony. The genetic analysis was performed using nine nuclear microsatellite markers (ncSSR) and two paternally inherited chloroplast marker (cpDNA) amplifying in the intergenic spacer region trnQ–rps16 and the intron region rps16. On basis of the ncSSR dataset after STRUCTURE analysis 80 % of the wild pear individuals were assigned as ‘true type’ P. pyraster genotypes. The cpDNA analysis showed shared haplotypes in P. pyraster and P. communis but with an unequal frequency in both species. The analysis of molecular variance resulted in a moderate (ncSSR) and great (cpDNA) variation among ‘true type’ P. pyraster and the pear cultivars. The genetic diversity in the ‘true type’ P. pyraster populations was still high and the genetic structure between the populations low (ncSSR and cpDNA) indicating a genetic exchange between the populations by pollen and seeds. The clear discrimination between the P. pyraster and P. communis confirms our expectation of the existence of ‘true type’ P. pyraster individuals in the study area. The existing genetic integrity and the high genetic diversity argue for the implementation of preservation measures in P. pyraster.  相似文献   

16.
Wild crop relatives are of considerable interest in plant breeding and significant efforts have been made to transfer their genetic variation into modern crops. Of the three diploid progenitors of bread wheat (Triticum aestivum L.), only Aegilops tauschii Coss. has been explored and exploited and only for some above ground characteristics. The three wild progenitors (Aegilops speltoides Tausch., Triticum urartu Tumanian ex Gandilyan, and Aegilops tauschii) have never been assayed for root traits. Here we report such a root study, and include Triticum monococcum L. subsp. boeoticum (Boiss.) Hayek and T. turgidum L. subsp. dicoccoides (Koern. ex Asch. et Graebn.) Thell. Fifteen accessions were selected from the above wild species and tested in the presence of one bread wheat cultivar Pavon F76. Significant variation was observed between and within the taxa. Of all accessions tested, cv. Pavon F76 had the smallest root system at maturity while A. speltoides had the largest root system. Moreover, Aegilops spp. had larger mean values for root biomass when compared with Triticum spp. These results suggest there is significant unexplored potential for the use of wheat wild relatives in wheat breeding to improve the root system, or to develop synthetic mapping populations to study root traits.  相似文献   

17.

Purpose

The effect on P uptake by plants after inoculation with P-mobilizing microorganisms may be modulated by soil properties, including natural microbiota. However, to put this theory into practical use, research is needed to shed new light on the soil factors which affect the capability of improving P nutrition in plants. The aim of this study was to assess how two P-mobilizing microorganisms, Trichoderma asperellum T34 and Bacillus subtilis QST713, influence P uptake by wheat plants in different soils; this will allow us to identify the soil properties which affect the efficiency of P nutrition in plants.

Materials and methods

In a completely randomized experiment, wheat was grown in pots in a growing chamber in soils with Olsen P values ranging from 4.8 to 8.7 mg kg?1. The plants were inoculated with three treatments: T34, B. subtilis, and a non-inoculated control.

Results and discussion

Overall, B. subtilis was more effective in increasing plant P uptake and in mobilizing soil P (measured as Olsen P values) than T34. In some soils, B. subtilis was the only treatment which increased Olsen P in the rhizosphere after cultivation. However, the effect of both microorganisms differed depending on the soil. For B. subtilis, phytase hydrolysable P, Olsen P, carbonates, the Feca/Fecbd ratio, and citrate-soluble P accounted for 92% of the variation in P uptake in inoculated plants (compared with the non-inoculated control). Most of these soil properties also accounted for 87% of the variation in the levels of shoot dry matter (DM) in B. subtilis-inoculated plants compared with shoot DM in the control plants. In addition, Olsen P, the Feca/Fecbd ratio, and phytase hydrolysable P in the NaOH extracts accounted for 82 and 74% of the variation in the effect of T34 on P uptake and shoot DM, respectively. Overall, the lower the initial Olsen P in the soil, the higher the P uptake caused by microorganisms.

Conclusions

The initial availability of P and organic P in soil, in addition to other properties affecting P dynamics in the soil, may explain the triggering and efficiency of the P-mobilizing mechanisms in microorganisms. These are crucial in explaining the potential benefits to crops and, as a result, their practical use as a bio-fertilizer.
  相似文献   

18.
Agricultural management significantly affects methane (CH4) and nitrous oxide (N2O) emissions from paddy fields. However, little is known about the underlying microbiological mechanism. Field experiment was conducted to investigate the effect of the water regime and straw incorporation on CH4 and N2O emissions and soil properties. Quantitative PCR was applied to measure the abundance of soil methanogens, methane-oxidising bacteria, nitrifiers, and denitrifiers according to DNA and mRNA expression levels of microbial genes, including mcrA, pmoA, amoA, and nirK/nirS/nosZ. Field trials showed that the CH4 and N2O flux rates were negatively correlated with each other, and N2O emissions were far lower than CH4 emissions. Drainage and straw incorporation affected functional gene abundance through altered soil environment. The present (DNA-level) gene abundances of amoA, nosZ, and mcrA were higher with straw incorporation than those without straw incorporation, and they were positively correlated with high concentrations of soil exchangeable NH4+ and dissolved organic carbon. The active (mRNA-level) gene abundance of mcrA was lower in the drainage treatment than in continuous flooding, which was negatively correlated with soil redox potential (Eh). The CH4 flux rate was significantly and positively correlated with active mcrA abundance but negatively correlated with Eh. The N2O flux rate was significantly and positively correlated with present and active nirS abundance and positively correlated with soil Eh. Thus, we demonstrated that active gene abundance, such as of mcrA for CH4 and nirS for N2O, reflects the contradictory relationship between CH4 and N2O emissions regulated by soil Eh in acidic paddy soils.  相似文献   

19.
Cuttings of black willow (Salix nigra), a naturally occurring wetland species, are used for restoration and streambank stabilization. As an adaptation to their wetland habitat, this species develops aerenchyma tissue to avoid root anoxia. To determine the effects of combined copper and ultraviolet-B radiation exposure on aerenchyma tissue (measured as root porosity), black willow cuttings were grown hydroponically and exposed to three ultraviolet-B (UV-B) intensities and three Cu concentrations in a completely randomized 3?×?3 factorial design. While both UV-B (F 2,42?=?11.45; p?=?0.0001) and Cu (F 2,42?=?6.14; p?=?0.0046) exposure increased root porosity, total biomass decreased in response to both UV-B (F 2,43?=?3.36; p?=?0.0441) and to Cu (F 2,43?=?4.03; p?=?0.0249). Root biomass decreased only in response to Cu (F 2,41?=?3.41; p?=?0.0427) resulting in a decrease in the root/shoot ratio (F 2,42?=?3.5; p?=?0.0393). Copper exposure also resulted in a decrease in the number of leaves/shoot (F 2,42?=?7.03; P?=?0.0023). No UV-B and Cu interaction was found. While the present research indicates the negative effects of Cu contamination and elevated UV-B intensities on S. nigra, it also points out potential mechanisms that S. nigra uses to alleviate these stresses.  相似文献   

20.
The risk of enteropathogens to food and water is highly dependent on their survival in soil environments. Here, the effects of soil type, particle size, the presence of natural organic matter (NOM) or Fe/Al (hydro)oxides on pathogenic Escherichia coli O157:H7 survival in sterilized soil particles were assessed through survival, attachment, metabolic activity, and qRT-PCR analyses. The abundance of inoculated E. coli O157:H7 in Brown soil (Alfisol) particles increased 0.6–1.4 log10 CFU/g within 3 days (except for NOM-stripped clay), while that in Red soil (Ultisol) particles decreased rapidly in 8 days post-inoculation. Additionally, survival of bacteria was significantly enhanced when Fe/Al (hydro)oxides had been removed from Red soil particles. For the two soils, E. coli O157:H7 survived the longest in NOM-present clays and the bacterial adenosine 5′-triphosphate (ATP) levels were 0.7–2.0 times greater in clays than in sands and silts on day 8. Moreover, clays were more effective than silts and sands in binding cells and changing the expressions of acetate pathway-associated genes (pta and ackA). For silts and sands, E. coli O157:H7 decayed more rapidly in the presence of NOM and similar trends of bacterial ATP levels were observed between NOM-stripped and NOM-present soil particles, indicating that the primary role of NOM was not as a nutrient supply. These findings indicate that soil particles function mainly through attachment to change the metabolic pathway of E. coli O157:H7 and ultimately impact the survival of bacterial pathogens in soils.  相似文献   

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