共查询到20条相似文献，搜索用时 15 毫秒
1.
Saeed Keyvanshokooh Ahmad Ghasemi Mohsen Shahriari-Moghadam Rajab Mohammad Nazari & Mehdi Rahimpour 《Aquaculture Research》2007,38(9):953-956
The Caspian roach (Rutilus rutilus caspicus) is regarded as one of the most important commercial species in the Caspian Sea. Despite the commercial and conservation importance of the species, information on genetic relationships and diversities at the molecular level in Rutilus rutilus caspicus is scarce. Six microsatellite loci were analysed to study the genetic variation in two major populations of Caspian roach in the Iranian waters of the Caspian Sea: the Anzali Wetland and Gorgan Bay. The Fst value between populations was 0.07, suggesting that the genetic differentiation was significant (P<0.01). Both the studied populations deviated from Hardy–Weinberg equilibrium proportions at a number of loci, mostly due to the deficiency of heterozygosities. The genetic distance between populations was 0.29, which indicates that the genetic difference among the studied populations is pronounced. The differences between both populations were not statistically significant (P>0.05), neither for average number of alleles per locus nor for observed heterozygosities. The data generated in this study provide useful information on the genetic variation and differentiation in populations of Caspian roach. 相似文献
2.
Hesham Abdallah Hassanien Mohumad Elnady Ali Obeida & Hania Itriby 《Aquaculture Research》2004,35(6):587-593
Genetic diversity of the Nile tilapia Oreochromis niloticus collected from the river Nile (Cairo, Assuit and Qena) and two Delta lakes (Burullus and Manzalla) in Egypt was examined by the analysis of randomly amplified polymorphic DNA (RAPD). Of 25 primers examined,21 primers produced 230 RAPD bands. The percentage of polymorphic bands in Manzalla (29.4%) and Burullus (24%) populations was low compared with Assuit (30.54%), Cairo (33.5%) and Qena (44.84%) populations. The highest percentage of polymorphic bands was observed in the Qena population,suggesting a greater potential for use in breeding programs. The molecular phylogenetic tree constructed by unweighted pair‐group method of analysis shows Manzalla and Burullus populations strongly linked and separate from the Assuit and Cairo populations, with Qena population as outgroup. The data serve as a baseline analysis of the current genetic diversity found among O. niloticus populations in Egypt. 相似文献
3.
Pramoda Kumar Sahoo Jyotirmaya Mohanty Sushil Kumar Garnayak Bikash Ranjan Mohanty Banya Kar Joykrushna Jena Hema Prasanth 《Aquaculture Research》2013,44(2):220-230
Argulus is one of the most important fish parasites that cause heavy economic loss to aquaculture industry. The present investigation was undertaken to study the genetic diversity of the Argulus sp. collected from 13 locations representing major aquaculture zones in India by RAPD analysis and to develop species‐specific markers. Thirteen random decamer primers were used to amplify DNA fragments from three individual parasites of each location. Of the 172 bands scored by the primers, 168 were polymorphic. The per cent polymorphic loci and gene diversity values varied within a range of 8.14–43.02 and 0.0342–0.1727 respectively. Nei's genetic similarity between populations across all the primers ranged from 0.363 to 0.969. The dendrogram based on Nei's genetic distance showed two clusters; Bangalore and Mandi populations forming one cluster, and the rest in another cluster. The clusters also revealed strong correlation with the species identified as A. japonicus and A. siamensis respectively by morphological method. The study thus indicated A. siamensis as the major prevalent species in carp culture farms in India. Species‐specific primers were designed from unique sequences cloned from RAPD fragments that could able to identify A. siamensis and A. japonicus separately. 相似文献
4.
Maryam Akhoundian Negin Salamat Ahmad Savari Abdolali Movahedinia Mohammad Ali Salari 《Aquaculture Research》2020,51(4):1623-1642
Caspian roach (Rutilus rutilus caspicus), a spring spawning teleost, were subjected to various photoperiod and temperature regimes to study the feasibility of shifting the timing of spawning for artificial propagation purposes. A total of 650 female reproductively mature R. rutilus caspicus were subjected to different photoperiod and temperature regimes including four light regimes (natural light (NL), 16 hr of light (L):8 hr of darkness (D), 9L:15D, 11L:13D), each affected by three temperature regimes (14, 20 and 24°C) for 70 days. Five fish per tank were randomly sampled on Feb. 10, Feb. 20, March 28, April 15 and April 30 (natural spawning time). Ovarian tissue sections were studied using light microscope and transmission electron microscope (TEM). The levels of 17‐β estradiol (E2) and 17α‐hydroxyprogesterone (OHP) were also measured in the serum samples. In late winter (March 28th), the gonadal maturation and spawning were accelerated in fish treated with the long day length (16L/8D) and warm temperature (20°C). While, the maturation of oocytes and spawning delayed in fish exposed to low temperature (14°C) and short day length (9L/15D and 11L/13D). Photoperiod seems to play a more important role in the ovarian development of the R. rutilus caspicus compared to temperature; since even among the fish treated with the lowest temperature (14°C), those exposed to a longer day length (16L/8D), matured and spawned earlier than the others. Considering that the earliest spawning occurred in R. rutilus caspicus treated with 16L/8D at 20°C and the latest spawning occurred in fish exposed to low temperature and short photoperiod, it can be concluded that temperature and photoperiod play an important role in accelerating oocyte maturation and spawning. 相似文献
5.
Evaluation of genetic relationship among six Labeo species using randomly amplified polymorphic DNA (RAPD) 总被引：1，自引：0，他引：1
Paramananda Das Harendra Prasad Prem Kumar Meher Ashoktaru Barat & Ranjit Kumar Jana 《Aquaculture Research》2005,36(6):564-569
Labeo species constitute an important group of fish with intense diversity and potential for commercial aquaculture in many Southeast Asian nations including the Indian subcontinent. The present investigation involves the comparative analysis of randomly amplified polymorphic DNA (RAPD) profiles of six Labeo species viz., L. bata (bata), L. calbasu (calbasu), L. dyocheilus (dyocheilus), L. fimbriatus (fimbriatus), L. gonius (gonius) and L. rohita (rohu) at the nuclear DNA variation level. Fifteen decamer random primers were chosen from 40, which amplified a total of 449 DNA fragments ranging in size from 400 to 3000 bp. Both monomorphic and polymorphic DNA bands were identified based on their presence or absence that could be used for specieswise differentiation. Similarity coefficients were calculated to quantify the genetic variation within and between species. On an average, the highest intra‐species genetic similarity value was found in calbasu (0.93) followed by rohu and fimbriatus (0.91), bata (0.87), gonius (0.86) and dyocheilus (0.77). The interspecies genetic similarity estimates among the species of Labeo were used to deduce their phylogenetic relationships. The cluster analysis showed two main clusters, one with calbasu, rohu, fimbriatus and gonius and another with bata and dyocheilus. The study provides evidence that RAPD could be used for genetic differentiation of closely related species. 相似文献
6.
Genetic variation of the razor clam Ensis siliqua (Jeffreys, 1875) along the European coast based on random amplified polymorphic DNA markers 总被引：1，自引：0，他引：1
Juan Fernández-Tajes Miguel Gaspar Dorotea Martínez-Patiño Niall McDonough Dai Roberts Ana González-Tizón rés Martínez-Lage & Josefina Méndez 《Aquaculture Research》2007,38(11):1205-1212
Ensis siliqua is regarded as an increasingly valuable fishery resource with potential for commercial aquaculture in many European countries. The genetic variation of this razor clam was analysed by randomly amplified polymorphic DNA (RAPD) in six populations from Spain, Portugal and Ireland. Out of the 40 primers tested, five were chosen to assess genetic variation. A total of 61 RAPD loci were developed ranging in size from 400 to 2000 bp. The percentages of polymorphic loci, the allele effective number and the genetic diversity were comparable among populations, and demonstrated a high level of genetic variability. The values of Nei's genetic distance were small among the Spanish and Portuguese populations (0.051–0.065), and high between these and the Irish populations. Cluster and principal coordinate analyses supported these findings. A mantel test performed between geographic and genetic distance matrices showed a significant correlation (r=0.84, P<0.05), suggesting an isolation by distance process. 相似文献
7.
Yahong Huang Quanping Lu Jianlin Pan Jiaxin Yang 《Journal of the World Aquaculture Society》2011,42(4):504-511
Genetic diversities of five domestic and five wild populations of the freshwater prawn, Macrobrachium nipponense, in Jiangsu Province, China, were assessed by amplified fragment length polymorphism analysis. A total of 267 unambiguous polymorphic bands were detected from 300 individuals. The percentage of polymorphic bands varied from 33.64 to 55.14% in the 10 populations. The Nei genetic diversities of the wild populations and their domestic counterparts after several generations were 0.185 ± 0.024 and 0.164 ± 0.013, respectively, showing a decrease in genetic diversity in domestic populations. The largest genetic differentiation exists among the populations from different geographical locations, whereas there was less differentiation between the wild and domestic population in the same site. The cultured population in the north of Jiangsu Province where the large individuals of the prawns were harvested twice a year in spring and autumn for 4 yr almost had no change of genetic diversity (P > 0.05); whereas the cultured population in the south of Jiangsu where the large individuals were harvested all the year had a significantly reduced genetic diversity (P < 0.05). Therefore, we deduced that the aquaculture model in the north of Jiangsu should be better than that in the south. The results may be helpful to genetic enhancement and conservation programs of this species. 相似文献
8.
Muniyandi Nagarajan Mohamed Abdulkather Haniffa Achamveetil Gopalakrishnan Valaparambil Saidumohammad Basheer & Abdul Muneer 《Aquaculture Research》2006,37(12):1151-1155
Genetic variations between Channa punctatus populations collected from three rivers of south India were examined using randomly amplified polymorphic DNA (RAPD). Sixty samples from each population were collected. Genomic DNA was isolated from the blood samples. Out of the 20 primers tested, six primers were used for genetic variation studies. A total of 42 RAPD bands were amplified in C. punctatus by the six primers. The total number of bands observed ranged from 34 in the Quilon population to 37 in the Thirunelveli population. Among the three populations, the highest genetic identity (0.9231) was found between Thirunelveli and Quilon populations. The results of the present study demonstrated that Thirunelveli and Quilon populations are more related to each other than to the Coimbatore population. 相似文献
9.
江苏及安徽地区十个中华绒螯蟹成蟹群体的RAPD分析 总被引：1，自引：0，他引：1
采用随机扩增多态DNA(RAPD)技术对取自江苏及安徽地区的10个群体的中华绒螯蟹共64个个体进行了遗传多样性分析.从24个随机引物中筛选出15个扩增重复性好、条带清晰、特异性强的引物,共检测出88个位点(100～2000 bp),各群体的多态位点比例为3.45%～26.19%,遗传多态度为0.0141～0.1036,说明该蟹类基因组DNA多态度较为贫乏,遗传变异水平较低;各群体间的遗传距离为0.0237～0.2466,遗传相似度为0.7815～0.9766,该蟹类群体之间发生了一定程度的分化;分化系数为0.4283～0.6632,Nm为0.2539～0.6674,表明该蟹类群体之间发生了不同程度的遗传变异和遗传交换. 相似文献
10.
马氏珠母贝大亚湾和三亚野生种群内自繁及种群间杂交一代的RAPD分析 总被引：9，自引：1，他引：9
运用RAPD技术分析了广东大亚湾野生种群内繁殖一代DDl群体和海南三亚野生种群内繁殖一代SSl、两野生种群间杂交一代DS1群体各18个个体的遗传多样性。筛选的28个含10碱基的随机引物中，其中11个随机引物可产生稳定和可重复的多态扩增结果，共检测出86个位点，其中DDl群体有74个基因位点，其中56个表现多态，多态比例为75．68％；SSl群体79个基因位点，其中57个表现多态，多态比例是72．15％；DSl群体有72个基因位点，其中64个表现多态，多态比例为88．89％。用修正的Shannon表型多态性指数量化3个群体的遗传多态性，DDl、SSl和DS13个群体的遗传多态性分别为0．2280，0．2ll5和0．2456。不同地理种群间杂交能够增加子代的遗传多态性。 相似文献
11.
利用RAPD技术对取自胶州湾(青岛)、台湾海峡(厦门)和北部湾(海南)3个天然群体的24尾黑鲷(Sparus macrocephalus)进行群体内与群体间的遗传变异分析.在事先优化的反应条件下,所使用的60个随机引物中,有28个引物扩增出清晰稳定的片段,共计200条,大小在200～2 500 bp,其中多态性片段135条(多态性片段的比例为67.50%).青岛、厦门和海南黑鲷群体内的遗传距离分别是0.106 8、0.093 9和0.120 6,相似系数为0.893 2、0.906 1和0.879 4;群体间的遗传距离分别是0.155 0、0.131 8和0.122 8,其中青岛和海南黑鲷群体间的遗传距离最大,青岛与厦门其次,厦门与海南最小.群体内与群体间都具有较高的遗传变异.用MEGA2.1软件的UPGMA程序和NJ程序进行聚类分析,厦门与海南群体首先聚在一起,其次是青岛群体,两者的结果相一致. 相似文献
12.
采用RAPD标记技术对取自韩国沿海和俄罗斯沿海的星突江鲽养殖子一代进行了遗传多样性分析。从40个10bp随机引物中筛选出11个效果稳定的引物,对每个群体40个个体进行扩增,各获得57个位点。韩国群体多态位点数为33个,其多态位点比例P为57.89%;俄罗斯群体多态位点数为32个,其多态位点比例P为56.14%。韩国群体和俄罗斯群体的Shannon遗传多样度分别为0.3384和0.2963,Nei的多样性指数h分别为0.2305和0.1947。星突江鲽两群体遗传多态度总量Hsp为0.4252。其中,群体内遗传多态度Hpop为0.3174,源于群体内的遗传多样性的比例为0.7465,而源于群体间的遗传多样性的比例为0.2535。 相似文献
13.
中国太湖和荷兰的中华绒螯蟹随机扩增多态性DNA分析 总被引：2，自引：1，他引：2
用随机扩增多态DNA(RAPD)技术对中华绒螯蟹两个群体(荷兰盐城湖和中国太湖)进行了检测,从40个随机引物中筛选出14个对两群体进行扩增分析。结果为:14个引物共检测到100条清晰且重复性好的条带,分子量在200~2000bp之间,太湖和盐城湖两群体的多态位点比例、Shannon多样性指数、Ne i基因多样性指数分别为:46%和44%、0.2195和0.1976、0.1446和0.1270,两群体的遗传距离为0.013。据此结果推断,中华绒螯蟹群体遗传多样性不高,种内群体间的遗传变异较低,其遗传资源亟待保护,同时验证了荷兰的中华绒螯蟹是从中国引进繁衍的推论。 相似文献
14.
- 1. Spanish populations of the white‐clawed crayfish have declined sharply over the last three decades. Although Austropotamobius pallipes was once widely distributed and very abundant in most of the limestone basins of the country, outbreaks of crayfish plague since 1978 have reduced its populations, and now only some 500–600 small populations are left.
- 2. Consequently, the species now enjoys protection under national legislation. Management decisions regarding the conservation of a threatened species require an understanding of the genetic structure of its populations.
- 3. Using random amplified polymorphic DNA (RAPD) fingerprinting the genetic variability of 11 populations of A. pallipes was assessed over the species' range in Spain, and their phylogenetic relationships determined.
- 4. Substantial genetic differentiation was detected among the populations tested; no clear relationship was found between patterns of genetic variability and hydrological basin. The RAPD markers showed the degree of genetic variability of these populations to be similar to, and in some cases slightly higher than, that reported in previous studies on other Spanish and European populations of A. pallipes.
- 5. The results offer hope for the recovery of this species in Spain, and provide information that might be useful in the management of crayfish reintroduction programmes.
15.
中国对虾5个地理群体的RAPD分析 总被引：17，自引：0，他引：17
采用随机扩增多态DNA(RAPD)技术对取自辽东湾、渤海湾、海州湾、乳山湾及海洋岛5个群体的中国对虾共95个个体的遗传多样性进行分析。14个随机引物共检测出103个位点(200～2500bp),各群体的多态位点比例在31．07％～34．95％之间。遗传距离显示中国对虾群体间有一定遗传分化,其中辽东湾和乳山湾群体问的遗传距离最大(0．0742),而辽东湾和渤海湾群体间的遗传距离最小(为0．0243),群体间的遗传分化系数为0．2083。整体来看,中国对虾的遗传变异水平较低,遗传多态度为0．1621。用UPGMA对5个群体进行聚类分析,构建谱系关系图。 相似文献
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17.
运用RAPD技术对方斑东风螺(Babylonia areolata Lamarck)泰国养殖群体和海南养殖群体的遗传多样性进行研究。选取21个10 bp随机引物对方斑东风螺2个群体各20个个体进行RAPD分析,21个引物共检测出222条带。泰国养殖群体的多态位点比例为70.27%,Shannon多样性信息指数为0.1858,Nei’s基因多样性指数为0.249 1,群体内个体间平均遗传相似率为0.7920,平均遗传距离为0.2080;海南养殖群体的多态位点比例为73.87%,Shannon信息指数为0.2044,Nei’s基因多样性指数为0.2615,群体内个体间平均遗传相似率为0.7620,平均遗传距离为0.2380。群体内遗传变异占种内遗传变异的76.81%,群体间遗传变异占23.19%。以上分析表明,方斑东风螺泰国养殖群体和海南养殖群体的遗传多样性水平仍较高,但海南群体的遗传多样性水平比泰国群体要高。 相似文献
18.
《Aquaculture (Amsterdam, Netherlands)》2005,243(1-4):49-60
Genetic variation was comparatively analyzed between the artificially induced diploid gynogen population from F10 allotetraploid hybrids of red crucian carp (♀) (Carassius auratus red var., 2n=100)×common carp (♂) (Cyprinus carpio L., 2n=100) and the normal F10 allotetraploid hybrid population used as the control, using random amplified polymorphic DNA (RAPD) assay and microsatellite analysis. The specific 600-bp fragment for diploid gynogen population was detected by S45 and the specific 900-bp fragment for allotetraploid F10 hybrid population was detected by S134. The results from RAPD assay and microsatellite analysis were in agreement with each other, that is to say, the diploid gynogens presented lower level of polymorphism than allotetraploid F10 hybrids. Furthermore, as expected, microsatellite analysis revealed more detailed information on genetic diversity than RAPD assay. The mean percentage of polymorphic loci (12.71%) and Shannon's index of phenotypic diversity (0.25) from RAPD data for diploid gynogen population were significantly lower than those (30.69% and 0.63, respectively) for F10 allotetraploid hybrid population. The mean number of alleles per microsatellite locus (1.73) in diploid gynogen population was considerably lower than that (2.55) in F10 allotetraploid hybrid population. The average observed (0.36) and expected heterozygosity (0.26) in diploid gynogen population were lower than those (0.58 and 0.40, respectively) in F10 allotetraploid hybrid population, indicating that the diploid gynogens presented lower genetic diversity than the allotetraploids. In addition, the mean effective number of alleles at 11 microsatellite loci (1.60) in diploid gynogen population was lower than that (1.88) in F10 allotetraploid hybrid population. The significant differences between two populations in the average observed and expected heterozygosity, mean number of alleles and effective number of alleles, suggested that the effect of gynogenesis resulted in rather higher genetic homogeneity in diploid gynogens. The comparative RAPD analysis of diploid gynogens and their parents was performed with 34 primers. The identical RAPD pattern was detected between diploid gynogens and their female parent, however, some clear specific RAPD bands were detected between diploid gynogens and their male parents, but not detected in their female parent. The result indicated that heterologous genetic material had incorporated into diploid gynogenetic fish (G1). 相似文献
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20.
以洞庭湖和原种场长吻（Leiocassis longirostris）为研究对象,采用20个随机引物对10个野生个体进行了随机扩增多态性DNA（random amplified polymorphic DNA,RAPD）群体遗传多样性分析。共检测到103条带,每个引物产生的条带数在2～9之间,片段大小在0.2～3.0kb之间,多态座位比例为41.75%,2群体内个体间遗传相似系数和遗传距离分别是,洞庭湖个体间遗传相似性系数（S）0.8795～0.9833,遗传距离（D）0.0167～0.1205;原种场个体间S为0.8794～0.9892,D为0.0319～0.1108;比较2群体S为0.7983～0.9994,D为0.0167～0.3017;Nei遗传多样性指数（He）0.3269。结果表明,长吻群体内遗传多样性较为丰富。 相似文献