共查询到20条相似文献，搜索用时 62 毫秒
1.
The objectives of this study were to investigate genetic variation and relationships between Indonesia-, Australian- and European-based cultivars and to evaluate variation within Indonesia cultivars as all cultivars are open-pollinated. Eight cauliflower cultivars collected from three production regions in Indonesia and four F1 hybrids cultivars grown in Australia were evaluated using RAPD and ISSR markers. DNA polymorphisms generated from 10 polymorphic RAPD primers were used to construct a dendogram using the unweighted pair-group method with arithmetic averages (UPGMA) and to generate a fingerprinting key. ISSR marker analysis using 14 primers were attempted but DNA polymorphisms could not be clearly identified. The RAPD technique indicated that variation occurred both within and between Indonesian cultivars. Comparison between Indonesian-, Australian- and European-based cultivars showed that Indonesian cultivars have unique genotypes and would be good sources of genes for future crop improvement. 相似文献
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Xinjuan Lu Liwang Liu Yiqin Gong Liping Zhao Xianyong Song Xianwen Zhu 《Scientia Horticulturae》2009,122(4):645-648
A total of 18 genotypes of broccoli were subjected to random amplified polymorphic DNA (RAPD) and inter-simple sequence repeat (ISSR) marker analysis. Seventy-four RAPD and eight ISSR primers generated 344 and 67 polymorphic bands, respectively. All broccoli genotypes could be distinguished with two-primer combinations, indicating that RAPD and ISSR markers can be used to efficiently identify broccoli cultivars. These 18 broccoli genotypes could be separated into two major sub-groups. The first major sub-group (A) included 13 genotypes and the second major sub-group (B) was comprised of five genotypes belonging to early-maturating cultivars. Genetic diversity analysis was performed on the 18 broccoli genotypes, one radish genotype, and six related Brassica accessions. All accessions could be clustered into two groups (radish and Brassica) based on the unweighted pair group of arithmetic average (UPGMA) cluster analysis. The UPGMA analysis indicated that broccoli is most closely related to cauliflower, than to cabbage and Chinese cabbage. 相似文献
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Anita Kuras Kristina Antonius Ruslan Kalendar Dorota Kruczy ´nska 《The Journal of Horticultural Science and Biotechnology》2013,88(6):790-794
SummaryGenetic variation between five apple cultivars (‘Golden Delicious’, ‘Gala’, ‘Jonagold’, ‘?ampion’, and ‘Idared’) and ten of their sports (‘Golden Delicious Reinders’, ‘Goldrosio’, ‘Gala Must’, ‘Gala Schniga Schnitzer’, ‘Jonagored’, ‘Jonagold Excel’, ‘Szampion Arno’, ‘Szampion Reno Malinowy’, ‘Idaredest’, and ‘Red Idared’) was investigated using five types of DNA markers: Inter-Simple Sequence Repeats (ISSR), Simple Sequence Repeats (SSR), Amplified Fragment Length Polymorphism (AFLP), Sequence-Specific Amplified Polymorphism (S-SAP), and Inter-Primer Binding Site (iPBS) amplification. In total, 941 polymorphic amplified fragments were obtained using 12 ISSR, 12 SSR, ten AFLP, 19 iPBS, and 15 S-SAP primers or primer pairs. Four of the above-described techniques (except for SSRs with the primer pairs used in this study) were able to distinguish between the sports and their parental cultivar. The most effective technique to distinguish between the genotypes analysed was S-SAP, which detects variations in DNA regions flanking retrotransposon insertion sites.The combined use of ISSR,AFLP, iPBS, and S-SAP markers identified and distinguished all of the sports tested. 相似文献
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Li-Wang Liu Li-Ping Zhao Yi-Qin Gong Ming-Xia Wang Li-Ming Chen Jin-Lan Yang Yan Wang Fan-Min Yu Long-Zhi Wang 《Scientia Horticulturae》2008
Three molecular marker systems, RAPD (random amplified polymorphic DNA), ISSR (inter-simple sequence repeat) and SRAP (sequence-related amplified polymorphism), were employed for identification and genetic diversity analysis of 35 elite late-bolting radish cultivars. Detected by 35 RAPD primers, 22 ISSR primers and 17 SRAP primer combinations, the proportions of polymorphic bands were 85.44%, 85.2% and 85.41%, respectively, and the mean genetic similarity coefficients between pairs of genotypes were 0.781, 0.787 and 0.764, respectively. Each of the three molecular marker systems can identify all the cultivars. Five sets of three-RAPD primers, 3 sets of three-ISSR primers and 16 sets of three-SRAP primer combinations were able to distinguish all the cultivars. A linear relationship was observed between Resolving power (Rp) of a primer and its ability to distinguish genotypes. The 35 cultivars were clustered into three major groups based on the RAPD, ISSR and marker combination data with UPGMA, which are in high accordance with their own origins and main characteristics. The results demonstrated that these three marker systems could be useful for identification and genetic diversity analysis of radish cultivars. 相似文献
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以8个豆瓣菜的品种为试材，用筛选出的79个RAPD引物和34个ISSR引物对这8个品种的基因组DNA进行扩增，分别扩增出361条和179条谱带，每个引物扩增出的带在3～10条之间，平均每个引物扩增出约5条带。根据所得的条带进行聚类分析，两种标记产生的聚类图存在一些差异，但它们都可以较好地将8个品种按亲缘关系的远近划分为3个不同的类群。Mantel测试得出相关系数r=0．58155，表明RAPD和ISSR两种分子标记技术的相关度很低。 相似文献
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M. Sangeeta Kutty Lalitha Anand 《The Journal of Horticultural Science and Biotechnology》2013,88(4):774-778
SummaryRandomly amplified polymorphic DNA (RAPD) markers were used to estimate genetic diversity among 24 cultivars of short-day onions. Total genomic DNA was extracted and subjected to RAPD analysis using 90 arbitrary 10-mer primers. Of these, 15 primers were selected which yielded 137 bands, 91.24% of which were polymorphic. None of the primers produced a unique banding pattern for each cultivar. RAPD data were used to calculate a Squared-Euclidian Distance matrix which revealed a minimum genetic distance between cultivars ‘AFLR-722’ and ‘PBR-140’, and a maximum genetic distance between cultivars ‘PBR-139’ and ‘A.Kalyan’, and ‘MS-48’ and ‘A.Kalyan’. Based on the distance matrix, cluster analysis was done using a minimum variance algorithm.The dendrogram thus generated, based on Ward’s method, grouped the 24 onion cultivars into two major clusters. The first cluster consisted of cultivars from the northern region, and the second of cultivars from the southern region of India. The present study shows that there is high diversity among the onion cultivars selected and indicates the potential of RAPD markers for identification and maintenance of onion germplasm for crop improvement purposes. 相似文献
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ISSR和RAPD分子标记技术在不同君子兰品种遗传多样性上的应用 总被引：1，自引：1，他引：0
采用ISSR标记和RAPD标记技术研究了15个君子兰品种的遗传多样性。结果表明:从55条寡聚核苷酸引物中筛选出10条简单重复序列引物,共扩增出65条带,平均每条引物扩增出6.5条带,其中5.4条多态性带,多态性比率为81.95%;从55条寡聚核苷酸引物中筛选出11条多态性引物,共扩增出47条带,平均每条引物扩增出4.27条带,其中32条多态性带,多态性比率为67.88%。POPGEN软件计算出君子兰品种间遗传距离为0.1123~0.6330,平均值为0.3263。基于遗传相似系数的UPGMA聚类分析将15个品种明显聚为二组,国兰系列品种为一组,日本兰系列品种组成另一组。 相似文献
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M. R. Coyner M. A. Norton M. E. Uchanski 《The Journal of Horticultural Science and Biotechnology》2013,88(5):543-548
SummaryTo assess genetic relatedness in thornless blackberry (Rubus spp.), 11 different blackberry cultivars were screened using random amplified polymorphic DNA (RAPD) markers. The blackberries selected represented four different thornless backgrounds. Genetic similarity was estimated using 140 random primers, and the cluster analysis conducted using the RAPD data grouped the cultivars into three distinct clades. Ninety-eight primers produced 113 cultivar-specific RAPD fragments capable of identifying each cultivar. In addition, reproducible polymorphism using two primers was observed within the ‘Evergreen’ (R. laciniatus) clade that consisted of the pure thornless blackberry ‘Everthornless’, the chimeral ‘Thornless Evergreen’, and their thorny progenitor ‘Evergreen’. All three plants are believed to be identical, except for a single mutational event that caused the phenotypic change from thorny to thornless. The R. laciniatus RAPD marker data provide information that may eventually be useful to identify the gene(s) responsible for thornlessness in that species. 相似文献
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杧果种质遗传多样性的RAPD分析 总被引：15，自引：2，他引：15
对杧果不同生态型、不同胚性、不同果形与果色的38份品种和1个近缘种—扁桃进行了RAPD分析,19个引物在39份种质中共扩增出223条带,其中多态性带为196条,多态性带的百分率为87.89%,表明品种间存在着广泛的遗传基础。利用UPGMA进行聚类分析,在相似性系数0.755的水平上将38个品种分成3组,该结果与传统上以胚型为依据进行品种类群划分比较吻合。发现了多个与胚性密切相关和1个与果皮颜色密切相关的RAPD标记,并就部分品种的系谱关系、胚性和果皮颜色的遗传进行了探讨。 相似文献
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Veerendra K. Verma T.K. Behera A.D. Munshi Swarup K. Parida T. Mohapatra 《Scientia Horticulturae》2007
Ten inbred lines of ash gourd [Benincasa hispida (Thunb.) Cogn.] were crossed to produce 45 F1 hybrids (without reciprocal) which were evaluated along with the parents for 20 growth- and yield-related traits, in a replicated field trial. High level of heterosis was observed among the hybrids for most of the traits examined, including yield. These inbred lines were analysed by using 42 RAPD primers those produced 282 DNA marker bands. A total of 130 RAPD markers were obtained with a mean of 3.1 per primer, which in combination discriminated all the inbreds from each other. Pair-wise genetic distance measurements ranged from 0.07 to 0.31, suggesting a wide genetic diversity for these inbreds. These inberds were also analysed with five ISSR primers of which four were informative. Twenty-six ISSR marker bands were generated of which 11 were polymorphic with an average of 2.80 per primers. The percentage of polymorphic bands produced were higher in ISSR markers (>80%) than generated through RAPD markers (46%). Although the results indicated significant positive correlations of genetic distance with hybrid performance and heterosis, the RAPD based genetic distance measures and use of limited ISSR markers in this present study could not effectively predict hybrid performance in this crop. The genetic variation among ash gourd inbred lines examined, herein, defined a marker array (combined ISSR and RAPD) for the development of a standard reference for further genetic analyses, and the selection of potential parents for predicting hybrid performance and heterosis. 相似文献
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Genetic diversity within Zinnia elegans is key to the genetic improvement of this important ornamental species. Here, morphological traits and RAPD and ISSR molecular markers were used to assess levels of polymorphism across 20 inbred lines. Thirty-four morphological traits were scored and also 147 RAPD marker-fragments, as amplified by 12 arbitrary primers, and 128 ISSR marker-fragments as generated by 9 primers. The number of polymorphic loci, the percentage of polymorphic loci, Shannon's Information index (I) and the effective number of alleles (Ne) were calculated from the RAPD data as 100, 68.03%, 0.3559 and 1.4169, respectively. From the ISSR data, these respective statistics were calculated as 97, 76.38%, 0.4013 and 1.4728. Thus, ISSR markers were considered slightly superior to RAPD markers for assessing genetic diversity between the accessions; however, Mantel's test indicated significant correlation (R = 0.733) of the RAPD and ISSR results. By contrast, the morphological matrix showed low correlation with both RAPD and ISSR data matrices (R = 0.3814 and 0.3765, respectively). Cluster analysis showed that groupings of the accessions according to all three methods correlated well with their geographic region of origin, but flower color was not strongly associated with the genetic classification of these inbred lines of Z. elegans. 相似文献
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W. A. Roach W. O. Roberts 《The Journal of Horticultural Science and Biotechnology》2013,88(1):108-119
SummaryRandomly Amplified Polymorphic DNA (RAPD) markers were used to evaluate genetic similarity and inter-relationship among31 acid citrus species and cultivars, including sour oranges (six accessions); ‘Yuzu’ (four accessions) andits relatives (21 accessions). Out of the 60 decamer primers screened, 27 were selected which produced 108 markers; 76 of which were polymorphic. Species or cultivar-specific RAPD markers were also found. A dendrogram based on genetic distance implied that sour oranges were very distinct from ‘Yuzu’ and its relatives. ‘Yuzu’ accessions were very closely linked to each other, however; for the other specimens genetic polymorphism could easily be detected by RAPDs and the genetic variation between accessions was quite high and revealed their different origins. In this study some RAPDs allowed the distinction of very close cultivars, for instance ‘Kabosu’ from ‘Aka kabosu’. 相似文献
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Diversity and genetic relationship in 100 cashew germplasm accessions were analyzed by using RAPD and ISSR markers. Using 10 selected RAPD primers 60 bands were generated, of which 51 bands were polymorphic (85%), and with 10 selected ISSR primers 67 amplified bands were observed with 58 polymorphic bands (86.6%). Though both kinds of markers discriminated the accessions effectively, analysis of combined data of markers (RAPD + ISSR) resulted in better distinction of accessions. By combining markers, a total of 127 bands were detected, of which 109 bands (85.8%) were polymorphic and produced on an average of 5.45 polymorphic bands per primer. Primers with high polymorphic information content and marker index were identified for discriminating accessions. High percentage of polymorphism (>85%) observed with different markers indicated high level of genetic variation existing among the accessions. Genetic relationship estimated using similarity co-efficient (Jaccard’s) values between different pair of accessions varied from 0.43 to 0.94 in RAPD, 0.38 to 0.89 in ISSR and 0.43 to 0.87 with combined markers suggested a diversity (dissimilarity) ranging from 6 to 57%, 11 to 62% and 13 to 57% respectively and the diversity skewed around 50% indicated moderate diversity. The cluster analysis with UPGMA method separated the accessions broadly into 13 clusters and in that three into smaller clusters. Some correspondence between the molecular groupings and the morphological clusters were observed. Among the accessions, NRC-142 and NRC-12 were highly divergent and NRC-231 and NRC-232 were genetically similar. 相似文献
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Shadan Khorshidi Gholamhossein Davarynejad Leila Samiei Mohammad Moghaddam 《Erwerbs-Obstbau》2017,59(4):301-308
ISSR molecular marker was used to investigate genetic diversity of ‘Dare Gazi’ genotypes of Mashhad Esteghlal orchard and its relationship with other commercial and native cultivars of pear. Among ‘Dare Gazi’ genotypes of Mashhad Esteghlal orchard 23 genotypes were selected base on difference in tree vigor, leaf color, shape and color of fruit and also 33 other commercial and native pear cultivars from Esteghlal orchard and other Mashhad commercial orchards were studied. A total number of 230 DNA fragments were obtained using 11 primers of which 225 were polymorphic. On average, each primer produced 20.9 bands. Dice similarity coefficient ranged from 0.27 (between ‘Dom Kaj’ and Asian pear) to 1 (between ‘Dare Gazi’ 1 and 2 genotypes). Sample cluster dendrogram indicated that 56 genotypes were divided into 12 distinct clusters. The dendogram generated on the principle of Unweight Pair Wise Method using Arithmetic Average (UPGMA) was constructed by Dice coefficient and the genotypes were grouped into 12 clusters. ‘Dare Gazi’ genotypes did not show 100% similarity due to seed propagation or mutation, as ‘Dare Gazi’ 3 and 18 genotypes had the lowest similarity coefficient (0.64). Asian pears were placed in a separate group from European pears. And ‘Dare Gazi’ genotypes from different orchards were grouped separately, but all of them are called as ‘Dare Gazi’ pear for convenience. ISSR molecular marker can well identify the genetic variability among genotypes and cultivars and found suitable for grouping them. 相似文献
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利用RAPD标记研究部分葡萄品种的亲缘关系 总被引：4，自引：1，他引：3
对47个葡萄品种进行RAPD分析。从100条随机引物中筛选出30个多态性引物用于DNA扩增,共扩出216条DNA带,121条具有多态性,多态性比例为56.01%。通过聚类分析结果表明,供试品种分成5大类,巨峰、红瑞宝、龙宝等巨峰系品种聚为一类。其中龙宝和红瑞宝优先聚在一起。表明葡萄品种间的遗传多样性有明显差异,即使父母本相同的品种,利用RAPD技术也可以分开。聚类图显示,品种间遗传一致度与品种的遗传背景有关,如高妻与红井川,红瑞宝与龙宝优先聚在一起;有的品种虽属同一杂交组合却未能表现最大遗传一致度,如京玉与奥古斯特,在聚类图中处于相邻的位置,说明无性繁殖的葡萄在双亲基因型杂合条件下,有性杂交通过基因重组,杂种后代也可呈现出有较大遗传差异。 相似文献
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黑穗醋栗品种亲缘关系的ISSR分析 总被引：4，自引：1，他引：3
采用ISSR标记技术对39个黑穗醋栗品种的亲缘关系进行分析。结果表明：13条ISSR引物扩增的总带数（A）从3到11条不等,平均扩增出6.77条带,平均多态性带百分比（P）为64.37%。聚类分析显示,在相似性系数为0.8496处将39个黑穗醋栗品种分为5组。第Ⅰ组包含8个起源国家的品种,说明世界各国之间基因交流较为频繁。‘Ben Lomond’和‘Kantata’同其他品种的遗传距离较远,两者又有诸多优良农艺性状,可作为黑穗醋栗的优良育种材料。 相似文献
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Niraj Singh Ashish K. Pal Baleshwar Meena R. K. Roy Sushma Tamta 《The Journal of Horticultural Science and Biotechnology》2017,92(6):577-582
Gladiolus is an economically important ornamental crop, cultivated for its beautiful flowers throughout the world. The correct genotype identification of plant material is very significant for the floriculture industry. The aim of this study was to develop sequence-characterised amplified region (SCAR) markers from RAPD and ISSR fragments for identification and authentication of Gladiolus germplasm. The SCAR markers developed could be easily employed as valuable tools to identify newly developed Gladiolus cultivars. The SCAR markers, viz. ScG12, ScG34, and ScG36, are specific to the DNA from all 62 Gladiolus cultivars, as they did not amplify the DNA of other taxa of the family Iridaceae, including Iris, Amaryllis, and Narcissus. All three SCAR markers distinguished Gladiolus from other taxa of the family Iridaceae, whereas marker ScAm was specific to the ‘Amethyst’ cultivar. Our results confirmed that this particular SCAR marker distinguished the ‘Amethyst’ cultivar from the other 62 Gladiolus cultivars investigated in the present study. This development of SCAR markers based on RAPD and ISSR markers seems to be the maiden attempt for Gladiolus cultivars. 相似文献