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1.
A strong temperature dependence of oxygen K-edge x-ray absorption fine structure features was observed for supercooled and normal liquid water droplets prepared from the breakup of a liquid microjet. Analysis of the data over the temperature range 251 to 288 kelvin (-22 degrees to +15 degrees C) yields a value of 1.5 +/- 0.5 kilocalories per mole for the average thermal energy required to effect an observable rearrangement between the fully coordinated ("ice-like") and distorted ("broken-donor") local hydrogen-bonding configurations responsible for the pre-edge and post-edge features, respectively. This energy equals the latent heat of melting of ice with hexagonal symmetry (ice Ih) and is consistent with the distribution of hydrogen bond strengths obtained for the "overstructured" ST2 model of water.  相似文献   

2.
Liquid state structure has traditionally been characterized with the radial distribution functions between atoms. Although these functions are routinely available from x-ray diffraction and neutron scattering experiments or from computer simulations, they cannot be interpreted unambiguously to provide the spatial order in a molecular liquid. A direct approach to determining the spatial structure in the liquid state is demonstrated here. Three-dimensional maps representing the local atomic densities are presented for several water models. These spatial maps provide a picture of the short-range order in liquid water which reveals specific details of its local structure that are important in the understanding of its properties.  相似文献   

3.
Vibrational studies that selectively probe molecular structure at CCl4/H2O and hydrocarbon/H2O interfaces show that the hydrogen bonding between adjacent water molecules at these interfaces is weak, in contrast to generally accepted models of water next to fluid hydrophobic surfaces that suggest strong hydrogen bonding. However, interactions between these water molecules and the organic phase result in substantial orientation of these weakly hydrogen-bonded water molecules in the interfacial region. The results have important implications for understanding water adjacent to hydrophobic surfaces and the penetration of water into hydrophobic phases.  相似文献   

4.
Mao WL  Mao HK  Meng Y  Eng PJ  Hu MY  Chow P  Cai YQ  Shu J  Hemley RJ 《Science (New York, N.Y.)》2006,314(5799):636-638
When subjected to high pressure and extensive x-radiation, water (H2O) molecules cleaved, forming O-O and H-H bonds. The oxygen (O) and hydrogen (H) framework in ice VII was converted into a molecular alloy of O2 and H2. X-ray diffraction, x-ray Raman scattering, and optical Raman spectroscopy demonstrated that this crystalline solid differs from previously known phases. It remained stable with respect to variations in pressure, temperature, and further x-ray and laser exposure, thus opening new possibilities for studying molecular interactions in the hydrogen-oxygen binary system.  相似文献   

5.
Water revisited   总被引:1,自引:0,他引:1  
Liquid water consists of a macroscopically connected, random network of hydrogen bonds, with frequent strained and broken bonds, that is continually undergoing topological reformation. Anomalous properties of water arise from the competition between relatively bulky ways of connecting molecules into local patterns characterized by strong bonds and nearly tetrahedral angles and more compact arrangements characterized by more strain and bond breakage. However, these alternatives constitute virtually a continuum of architectural possibilities rather than a discrete pair of options. The singular behavior of supercooled water near -45 degrees C and the "hydrophobic" attraction between nonpolar entities are due to the same underlying phenomenon, namely, the clumping tendency of relatively strain-free convex cages or polyhedra.  相似文献   

6.
Water normally exists in hydrogen-bonded environments, but a single molecule of H(2)O without any hydrogen bonds can be completely isolated within the confined subnano space inside fullerene C(60). We isolated bulk quantities of such a molecule by first synthesizing an open-cage C(60) derivative whose opening can be enlarged in situ at 120°C that quantitatively encapsulated one water molecule under the high-pressure conditions. The relatively simple method was developed to close the cage and encapsulate water. The structure of H(2)O@C(60) was determined by single-crystal x-ray analysis, along with its physical and spectroscopic properties.  相似文献   

7.
The crystal structure of dihydrouridine hemihydrate has been determined by x-ray diffraction. Crystals of dihydrouridine contain two independent molecules in the asymmetric unit and a molecule of water. The x-ray structure determination has shown that the conformations of both molecules differ in important respects in the saturated base and the ribose. The molecular conformation of dihydrouridine has, for the first time, provided structural evidence that the rare nucleoside can proinote "loop" formation in the sugar-phosphate chain.  相似文献   

8.
Optical patterns in polarized light and x-ray reflections in the low-angle region were used to detect a shift from one liquid crystalline structure to another during polymerization. The polymerization took place in a Iotropic liquid crystal of water and sodium undecenoate, with a structure consisting of cylinders in a two-dimensional hexagonal close packing. After polymerization, a lamellar liquid crystalline structure was obtained.  相似文献   

9.
Structural changes during annealing of high-density amorphous ice were studied with both neutron and x-ray diffraction. The first diffraction peak was followed from the high- to the low-density amorphous form. Changes were observed to occur through a series of intermediate forms that appear to be metastable at each anneal temperature. Five distinct amorphous forms were studied with neutron scattering, and many more forms may be possible. Radial distribution functions indicate that the structure evolves systematically between 4 and 8 angstroms. The phase transformations in low-temperature liquid water may be much more complex than currently understood.  相似文献   

10.
The structure factor of amorphous solid D(2)O deposited from the vapor at 10 degrees K has been obtained by measuring the neutron diffraction spectrum in the wave vector transfer from 0.8 to 12.3 reciprocal angstroms. The results indicate that the phase investigated is amorphous and has a liquiid-like structure factor. The Fourier-transformed structure e factor yields a real space pair distribution function consistent with local tetrahedral coordination and hydrogen bonding, as in other condensed phases of water. The intramolecular OD separation is 1.00 angstrom; the lack of data for very large wave vector transfer and the expected near equality of the intramolecular DD separation and intermolecular O . . . D separation make it impossible to determine the intramolecular DOD angle with precision. The neutron scattering data presented are complementary to the x-ray diffraction studies of Venkatesh, Rice, antd Narten.  相似文献   

11.
(1) A common error in text-books on physical chemistry is pointed out. It is hoped that the correct value for the triple point temperature, +.0098 degrees C, will be given in new books and in succeeding editions of the books surveyed above. (2) Inconsistencies in the vapor pressure values for ice and for liquid water near 0 degrees C are pointed out. (3) The equilibrium vapor pressures for ice and liquid water under two different sets of equilibrium conditions are compared with the triple point pressure.  相似文献   

12.
Studying solvation of a large molecule on an atomic level is challenging because of the transient character and inhomogeneity of hydrogen bonding in liquid water. We studied water clusters of a protonated macrocyclic decapeptide, gramicidin S, which were prepared in the gas phase and then cooled to cryogenic temperatures. The experiment spectroscopically tracked fine structural changes of the clusters upon increasing the number of attached water molecules from 1 to 50 and distinguished vibrational fingerprints of different conformers. The data indicate that only the first two water molecules induce a substantial change of the gramicidin S structure by breaking two intramolecular noncovalent bonds. The peptide structure remains largely intact upon further solvation, reflecting the interplay between the strong intramolecular and weaker intermolecular hydrogen bonds.  相似文献   

13.
Protein hydration in aqueous solution   总被引:25,自引:0,他引:25  
High-resolution proton nuclear magnetic resonance studies of protein hydration in aqueous solution show that there are two qualitatively different types of hydration sites. A well-defined, small number of water molecules in the interior of the protein are in identical locations in the crystal structure and in solution, and their residence times are in the range from about 10(-2) to 10(-8) second. Hydration of the protein surface in solution is by water molecules with residence times in the subnanosecond range, even when they are located in hydration sites that contain well-ordered water in the x-ray structures of protein single crystals.  相似文献   

14.
S H Kim  A Rich 《Science (New York, N.Y.)》1967,158(804):1046-1048
9-Ethylhypoxanthine and 5-fluorouracil form a 1 : 1 crystalline complex. The structure of this complex has been solved by x-ray diffraction analysis. The molecules crystallize in a monoclinic lattice and form a sheet structure in which pairs of fluorouracil molecules are held together by two hydrogen bonds. The 9-ethylhypoxanthine residues fill up the rest of the molecular sheet by forming single hydrogen bonds with each uracil pair.  相似文献   

15.
Donohue J 《Science (New York, N.Y.)》1969,166(3908):1000-1002
A structure for "polywater" is proposed. It consists of hydrogen-bonded clusters of water molecules lying at the vertices of rhombic dodecahedra. This structure contains features which are less unattractive than those which are part of several earlier models.  相似文献   

16.
The structure of organic monolayers on liquid surfaces depends sensitively on the details of the molecular interactions. The structure of a stearic acid film on a mercury surface was measured as a function of coverage with angstrom resolution. Unlike monolayers on water, the molecules were found here to undergo a transition from surface-parallel to surface-normal orientation with increasing coverage. At high coverage, two condensed hexatic phases of standing-up molecules were found. At low coverage, a two-dimensional (2D) gas phase and condensed single- and double-layered phases of flat-lying molecular dimers were revealed, exhibiting a 1D longitudinal positional order. This system should provide a broader tunability range for nanostructure construction than solid-supported self-assembled monolayers.  相似文献   

17.
Liquid crystals-materials that flow like a fluid but are optically anisotropic like a crystal-exhibit large responses to modest external disturbances. In his Perspective, Lubensky discusses the advances reported in two papers in this issue, both of which involve liquid crystals made from V-shaped or bent-core molecules. Walba et al. report a synthetic strategy for producing a ferroelectric phase from achiral bent-core molecules. Pratibha et al. show that new liquid crystalline phases form when bent-core molecules are mixed with a particular class of rodlike molecules. These papers introduce new molecular designs that yield new liquid crystalline phases with controlled structure and properties.  相似文献   

18.
Structure of a dinucleotide: thymidylyl-(5'-3')-thymidylate-5' (pTpT)   总被引:3,自引:0,他引:3  
The crystal and molecular structure of the naturally occurring deoxyribose dinucleotide sodium thymidylyl-(5'-->3')-thymidylate-5' has been determined by x-ray diffraction. There are four molecules of dinucleotide and 52 water molecules in an orthorhombic unit cell of dimensions (in angstroms) a = 16.06, b = 15.13, c = 15.65, space group P2(1)2(1)2. There is a very high degree of conformational consistency between the two halves of the molecule when the dinucleotide is viewed as the combination of two 5'-mononucleotides. The planes of the two thymines are not parallel, but are tilted 38 degrees with respect to each other. An extensive system of hydrogen bonding exists involving the bases, waters, phosphates, and sodiums; no base-base hydrogen bonding occurs. The dinucleotide structural parameters should be of assistance in interpreting DNA fiber diagrams in terms of possible structures.  相似文献   

19.
Perrin CL 《Science (New York, N.Y.)》1994,266(5191):1665-1668
The nuclear magnetic resonance method of isotopic perturbation can distinguish between single- and double-well potentials in intramolecularly hydrogen-bonded monoanions of dicarboxylic acids. These are classic cases of a "strong," symmetric hydrogen bond in the crystal. The observed carbon-13 isotope shifts induced by the substitution of oxygen-18 demonstrate that these monoanions exist as a single symmetric structure in a nonpolar solvent but as two equilibrating tautomers in aqueous solution. The change is attributed to the disorder of the aqueous environment. These are simple counterexamples to the hope that the crystal structure reveals the actual molecular structure in aqueous solution.  相似文献   

20.
Fermi resonance was observed between the OH stretch and the overtone of the OH bending modes of HDO molecules contaminated in phase VII of D(2)O ice over the pressure range from 17 to 30 gigapascals. An anharmonic coupling constant, which is related to the potential energy surface on which hydrogen-bonded protons oscillate, was found to range around 50 wave numbers through the resonant pressure range. Its experimentally obtained magnitude and pressure-insensitive behavior will be useful for theoretical studies of the potential energy surface and hence of the nature of hydrogen bonding in ice.  相似文献   

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