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cDNA-SCoT差异显示分析是应用于植物基因差异表达研究的一项新技术.本研究以甘蔗品种桂糖11号根尖为材料,提取总RNA并反转录第1链cDNA,对影响甘蔗cDNA-SCoT差异显示PCR反应的cDNA模板、SCoT引物、dNTPs、Taq DNA聚合酶和Mg2+等因子进行优化,建立甘蔗cDNA-SCoT反应体系,同时应用优化后反应体系分离25％PEG6000胁迫诱导甘蔗根尖差异表达基因片段.结果表明:各项因子均对PCR扩增效果存在影响,20μL反应体系中各因子的最佳含量如下:cDNA 80 ng、引物浓度1.0 μmol/L、Taq DNA聚合酶2.0 U、dNTPs浓度200 μmo1/L、Mg2+浓度1.8 mmol/L.研究结果还显示,SCoT引物扩增多态性丰富,平均每条引物扩增条带30条,多态性条带比率为46.9％,6条引物分离得到PEG诱导甘蔗根尖特异表达片段45条,表明本研究所建立的甘蔗cDNA-SCoT反应体系具有操作简便、结果稳定、重复性好、成本低、多态性丰富等优点,可为甘蔗基因差异表达研究提供新的技术支持. 相似文献
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利用正交设计优化甘蔗SRAP-PCR反应体系 总被引：2，自引：0，他引：2
利用正交设计L16(45)对甘蔗SRAP-PCR反应体系的五大因素(Mg2+、dNTPs、引物、模板DNA、Taq酶)在4个水平上进行优化,得到如下结论:各因素水平变化对PCR反应的影响从大到小依次是:Mg2+、dNTPs、引物、Taq酶和模板DNA;通过对各因素进行筛选,建立甘蔗SRAP-PCR反应的最佳体系(20μL)为:dNTPs 0.25 mmol/L、引物0.1μmol/L、Mg2+2.5 mmol/L、Taq酶0.25U和模板DNA 60 ng。 相似文献
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以白木香为材料,研究沉香属植物基因组DNA提取方法,并优化SSR-PCR反应体系。通过改良CTAB法提取白木香叶片基因组DNA,经电泳和吸光度检测。优化影响白木香SSR-PCR主要参数,确立适合沉香属植物的SSR-PCR反应体系和扩增条件：在20 μL反应体系中,模板DNA、引物、Mg2+、dNTP和Taq DNA聚合酶等5种主要成分的最适浓度分别为2.5 ng/μL、1 μmol/L、2 mmol/L、0.2 mmol/L、1.2 U;并用9份沉香属植物DNA样品对SSR-PCR反应体系验证,能扩增清晰 相似文献
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以荷花叶片提取的基因组DNA为材料,通过对影响ISSR—PCR扩增效果的一些因素,如dNTPs浓度、Mg2＋浓度、TαDNA聚合酶用量、引物用量、模板DNA用量以及退火温度等进行筛选和优化,确立了可用于荷花ISSR—PCR分析的最适宜的PCR反应体系：20μL PCR反应体积含O．4mmol·L-1 dNTPs、3．5mmol·L-1Mg2＋、1．5U TαqDNA聚合酶、0．4μmol·μL-1引物、3ng模板DNA。PCR扩增程序为：94℃预变性2min,94oC变性30s,54．5℃退火30s,72℃延伸1min,45个循环,最后72℃延伸7min,置4℃保存。应用该ISSR体系对6份荷花种质进行了扩增,证实了该体系的适用性和稳定性。 相似文献
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本文报道了一种同时适用于水稻种子和叶片的简单快速DNA提取方法。该方法通过简单的碾磨、加热、离心等步骤便能制备适合PCR的DNA模板。用该方法单人每小时可以提取48个样品的DNA模板。本研究用该方法提IRT132个水稻种子DNA样品及1096个不同生长阶段的水稻叶片DNA样品,用13对PCR引物进行扩增,种子DNA样品PCR扩增成功率为91．0％,3个不同时期取材的叶片DNA样品PCR扩增成功率均在97．0％以上。该方法提取的DNA也可以进行高分辨率熔解曲线分析。 相似文献
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新型植物油莎豆DNA提取与SRAP体系优化 总被引：1，自引：0，他引：1
以14个不同地理来源的油莎豆品系为实验材料,研究了油莎豆DNA快速提取方法;以SRAP反应体系中DNA模板量、Mg2+浓度和引物浓度3个因子分别设置3个水平,共配制27个反应体系,对油莎豆SRAP反应体系进行优化。研究结果表明:改良CTAB法可获得较高质量的DNA,参试材料的A260/A280介于1.70～1.98;在27个SRAP反应体系(15μL)中,最优反应体系为DNA模板25ng、Mg2+1.5mmol/L、引物浓度1μmol/L、dNTPs 0.3mmol/L和Taq酶1U,可扩增出清晰稳定的多态性条带。 相似文献
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芒果SSR-PCR反应体系的优化 总被引：1，自引：0，他引：1
通过正交实验,以芒果品种金煌芒为材料,对影响芒果SSR-PCR反应体系中的Mg2+、dNTPs、Taq酶、模板DNA、引物这5个因素进行了优化。结果表明,各因素水平变化对PCR反应影响的显著性依次为:模板DNAdNTPs引物Mg2+Taq酶。最终确立SSR反应体系的最优条件为:20μL体系中,10×buffer2μL,模板DNA80ng,dNTPs0.4mmol/L,引物0.2μmol/L,Mg2+1.8mmol/L,Taq酶0.75U。 相似文献
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利用GenBank上公布的玉米T、C、S群不育细胞质线粒体DNA特异基因T-urf13、atp6-C、orf355的片段序列设计引物,以玉米自交系B77、U8112和150为核背景的3组同核异质系(N、T、C、S、M5P型和YⅡ-1型)叶片总DNA和种子总DNA以及线粒体DNA为模板,经PCR扩增对新型雄性不育胞质MP型和YⅡ-1型进行归群研究.结果表明:①M5P型和YⅡ-1型不育胞质的PCR扩增产物与T群、S群有很大差别,与C群不育胞质的PCR扩增结果相同,M5P型和YⅡ-1型不育胞质可归为C群;②设计的胞质鉴定特异引物以从叶片中提取的总DNA和从种子中提取的总DNA为模板扩增,与以线粒体DNA为模板扩增的结果一致,表明只要提取基因组总DNA就可以用于玉米胞质类型的归群;③基于PCR策略用玉米胞质特异引物对胞质进行归群,不受供试材料核背景的影响. 相似文献
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一种高效便捷的水稻DNA提取法及其应用 总被引：2，自引：0，他引：2
以水稻叶片、根和种子为材料,采用高通量快速法提取基因组DNA,用稻瘟病Pita基因分子标记进行检测,获得与预期片段大小一致的特异性条带,对165份育种材料的检测结果与稻瘟病接种鉴定一致。操作方法如下：将少量水稻叶片、根或种子放入 200 μL PCR盘中,加入70 μL 缓冲液A (含NaOH和Tween20),在PCR仪中加热到95℃,保持 10 min,再加入70 μL 缓冲液B (Tris HCl和EDTA),该提取液可以直接用于PCR扩增。该方法具有几个优点：1）成本低,仅用4种化学试剂,共140 μL 提取液;2）操作简便,仅需3步,每人每天可以提取上千份样品;3）仪器设备简单,只用常规的PCR仪;4）可直接提取干种子的DNA;5）DNA质量好,能检测出水稻中的抗稻瘟病单基因Pita,并且与稻瘟病接种鉴定结果一致;6）用量少,只需要 5~20 mg 叶片、20 mg 根或半粒籽粒。尤其是检测大量样本的基因型时, 此种方法更显得高效便捷。 相似文献
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The reliability of the standard double antibody sandwich enzymelinked immunosorbent assay (DAS-ELISA) was compared with a shorter, two-step DAS procedure in which sample and conjugate were mixed and incubated together in one step. The two assays were compared using beet western yellows virus and potato leafroll, M, S, X, and Y viruses. The two-step procedure was more sensitive,i.e., it detected small quantities of virus with greater statistical reliability than the standard procedure. At high virus concentrations, the standard produced stronger ELISA reactions than the two-step assay, but both assays were reliable. Since all of the viruses tested withstood high incubation temperatures, the incubation period for the two-step procedure could be reduced to 1 hr at 30 or 37 C. Therefore, assays could be completed within 2 hr using the two-step procedure compared with 2 days for the standard procedure. Reliable results were achieved with samples prepared by grinding tissues in buffer or, more simply, by adding pure, pressure extracted juice directly to conjugate in assay wells. Coating plates with gamma globulins or with F(ab′)2 fragments of gamma globulins gave equally reliable results with all viruses except potato leafroll, where coating with gamma globulins was superior. 相似文献
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A widely employed, comprehensive method exists for the determination of tuber total glycoalkaloids (TTGA). This method, which consists of a bisolvent extraction, preparation, and purification of aglycones and subsequent titration, was not acceptable for quantification of leaf total glycoalkaloids (LTGA). A modification of an existing extraction procedure was developed and tested. When the original bisolvent and the newly developed acetic acid extractions were contrasted percent recovery of a-solanine from leaf tissue was 19–27% and 91–97%, respectively. This new procedure was easily adapted for TTGA analysis and demonstrated improved recovery of α-solanine from tuber tissue when compared with the bisolvent extraction. 相似文献
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水稻GA20ox-2基因mRNA的TaqMan荧光定量RT-PCR检测 总被引：1，自引：0，他引：1
成功建立了一项基于TaqMan 实时荧光定量的RT-PCR技术,定量分析水稻半矮化关键基因之一GA20ox-2转录水平。该技术体系中重组质粒标准品的制备方法具有很好的实用性;质粒标准品对基因GA20ox-2表达的实时定量准确、可靠、便捷。标准曲线表明,所建立的GA20ox-2基因mRNA表达实时荧光定量PCR检测方法,特异性好,灵敏度高,可达102拷贝;线性范围广,可达102～107拷贝;扩增效率高（E=100.3%）;稳定性、重复性好,可靠性高,批内和批间变异系数仅分别为0.12%～0.31%和0.21%～0.34%;循环阈值与PCR 体系中起始模板量的对数值之间有着良好的线性关系（r＝0.999）,可对GA20ox 2基因表达进行准确实时定量。 相似文献
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西瓜第一染色体显微分离及其特异文库的构建 总被引：2，自引：0，他引：2
采用玻璃针分离法,通过显微操作系统成功地分离到西瓜(2n=22)的第一单染色体,将分离到的西瓜染色体放入0.2 mL Eppendorf管中,经去蛋白,Sau3A酶切,并在染色体DNA片段两端加上Sau3A人工接头后,进行两轮PCR扩增,得到0.4～2.0 kb之间的DNA片段.用西瓜的基因组标记成探针,与单染色体扩增产物进行southem杂交,表明这些西瓜单染色体扩增片段与西瓜基因组DNA之间有同源性,从而证明单染色体DNA确实已被成功地扩增.将第2轮PCR产物构建质粒文库,得到约20 000个重组子.这是染色体微分离、微克隆技术首次在瓜类作物中的应用,该方法为直接从西瓜单条染色体DNA文库中筛选分子标记奠定了基础,说明利用染色体显微分离、克隆技术对西瓜等瓜类作物基因组进行研究是可行的. 相似文献
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J. A. C. de Souza-Dias P. Russo J. A. Betti L. Miller S. A. Slack 《American Journal of Potato Research》1999,76(4):209-213
This report describes a simple, rapid and inexpensive procedure for sampling large numbers of dormant tubers for analysis of potato leafroll luteovirus (PLRV) infection. The procedure uses a common electric drill to simultaneously remove and macerate tuber-eye samples for detection of PLRV by the enzyme-linked immunosorbant assay (ELISA) and the polymerase chain reaction (PCR). By using these sampling and analysis approaches, 19 of 20 different PLRV isolates were detected in dormant tubers from plants with primary infections. Results from the dormant tuber analysis, were verified by planting the tubers and testing leaf tissue by ELISA and PCR. Similar sampling and testing done on healthy dormant tubers and sprouts from the tubers consistently gave negative results as expected. 相似文献
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In the present study, three DNA extraction procedures were examined to determine which might yield DNA from Grape leaves suitable for molecular analysis for RAPD, SSR. AFLP and etc analysis. The three methods examined were: the miniprep procedure and the modified CTAB for difficult species and protocol CTAB. Only the modified CTAB method consistently yielded DNA suitable for Polymerase Chain Reaction (PCR) amplification, regardless of plant growing conditions or leaf age. The quality and quantity of extracted genomic DNA gained from these methods are deliberated by means UV biophotometer, electrophoresis in 1.2% agarose gel and PCR. In this regard, application chosen for young and mature leaves, the most value of qualified DNA, is extracted from fully expanded leave when PVP was added to the extraction buffer. This same procedure also yielded PCR-amplifiable DNA from various other perennial, woody species and from other fruit species such as apple (Malus domestica), cherry (Prunus avium), peach (Prunuspersica), plum (Prunus domestica). DNA yield from this procedure is high (up to 1 mg g(-1) of leaf tissue). DNA is completely digestible with restriction endonucleases and amplifiable in the Polymerase Chain Reaction (PCR). 相似文献
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Epoxidized polybutadiene (EPB) was prepared by polybutadiene (PB) withm-chloroperbenzoic acid (MCPBA) in homogeneous solution. EPB was blended with poly(3-hydroxybutyrate) (PHB) up to 30 wt% by solution-precipitation procedure. The thermal decomposition of PHB/EPB blends was studied by thermogravimetric analysis (TGA), differential scanning calorimetry (DSC) and differential thermal analysis (DTA). The thermograms of PHB/EPB blends contained a two-step degradation process, while that of pure PHB sample exhibited only one-step degradation process. This degradation behavior of PHB/EPB blends, which have a higher thermal stability as measured by maximum decomposition temperature and residual weight, is probably due to crosslinking reactions of the epoxide groups in the EPB component with the carboxyl chain ends of PHB fragments during the degradation process, and the occurrence of such reactions can be assigned to the exothermic peaks in their DTA thermograms. 相似文献
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苗期PCR检测玉米丝黑穗病的取样时期及部位研究 总被引：1，自引：1，他引：0
以2份抗病及2份感病玉米自交系为试验材料,模拟玉米丝黑穗病适宜的侵染及田间发病条件,采用室内菌土接种方法培养玉米幼苗,通过PCR检测病原菌侵染率,研究苗期PCR检测抗、感玉米自交系的最佳取样时期和检测部位.结果表明,SSR标记SR3可用于玉米丝黑穗病室内接种鉴定;同一自交系不同的取样时期叶鞘侵染率均显著高于叶片侵染率;感病自交系与抗病自交系三叶期第3叶叶鞘的PCR侵染率差值极显著高于其他取样时期和取样部位,且该期4份自交系的侵染率与田间接种条件下的发病率呈显著正相关,为鉴别抗感自交系最佳的取样时期和部位. 相似文献