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1.
European native plant diversity is currently suffering erosion and extinction and thus, it is crucial to improve conservation strategies to maintain this essential resource. If unchecked, this genetic erosion and species extinction will cause unnecessary and irreversible harm to the economy and social well being of Europe. Much plant biodiversity is undoubtedly found in the existing 9654 European protected areas that cover 1,066,358 km2, but clearly targeted and active conservation of priority plant species is required within these protected areas. To help ensure more efficient long-term sustainable conservation, a novel approach to the in situ conservation of European plants, notably crop wild relatives, is suggested. The purpose of this approach is to know what plant genetic resources (PGR) we have, where they are located and to assess whether the current network of protected areas includes a representative sample of European PGR diversity. The generation of in situ conservation and management plans for PGR populations in existing protected areas can significantly improve the present conservation status. Additionally, the identification of gaps of certain PGR in current protected areas can provide the basis for the designation of new complementary PGR in situ reserves.  相似文献   

2.
The development of strategies for in situ, ex situ conservation and reforestation of the monkey puzzle tree (Araucaria araucana), a vulnerable tree endemic to southern South America, has led to an interest in the level and distribution of the genetic diversity of the species. Neutral DNA markers (RAPDs) and quantitative genetic techniques were used to characterise genetic heterogeneity within and among populations from throughout the natural range of the species. Both the level and pattern of genetic variation estimated using the different techniques were essentially uncorrelated. An important discrepancy was found with the neutral markers failing to detect an important quantitative genetic divergence across the Andean Range relating to drought tolerance. This study clearly demonstrates the potential problems associated with making recommendations for conserving the genetic resource of threatened species based solely on neutral marker studies. Alternative approaches are discussed, including a stronger focus on ecologically important traits and the potential use of surrogate measures of genetic variability.  相似文献   

3.
An overview of ex situ collections of cultivated flax (Linum usitatissimum L.) and 53 other species of the genus Linum L. is presented. The names of 33 genebanks in 23 countries preserving Linum germplasm and the species preserved at these places are provided. World genebanks engage in ex situ preservation of about 48,000 accessions of cultivated flax (Linum usitatissimum). However, possibly only 10,000 accessions of these are unique. Of the ca. 200 species of the genus Linum, other than L. usitatissimum, 53 are reported to be represented in the world’s ex situ collections with a total of about 900 accessions. Of these, 279 accessions alone refer to the wild progenitor of cultivated flax, Linum bienne Mill. However, L. bienne from the region of origin of cultivated flax is rarely represented in genebank collections. References to publications describing the techniques for ex situ conservation and the infraspecific variation of cultivated flax are made. It is suggested that taxonomic species delimitation within the genus Linum is in need of clarification and that the variation in Linum species for ornamental use or use in breeding is investigated.  相似文献   

4.
Towards a methodology for on-farm conservation of plant genetic resources   总被引：2，自引：2，他引：2  
The signing of the Convention on Biological Diversity at the ``Earth Summit' in 1992, its ratification and its subsequent entering into force have highlighted the need for an approach to biodiversity conservation that employs both ex situ and in situ techniques in a complementary manner. Though much research has focused on ex situ techniques, less progress has been made in developing methodologies for the conservation of genetic diversity in situ. The definition of in situ conservation used in the Convention on Biological Diversity encompasses two distinct processes: conservation of wild species in genetic reserves and of crops on-farm. Of these two, the latter, where the genetic diversity of crop land races is conserved within traditional farming systems, has been the less studied and remains less well understood. While there are still relatively few practical examples of on-farm genetic resources conservation, most genetic diversity of immediate and potential use to plant breeders is found among land races, and there is evidence that it is being rapidly eroded. This paper attempts to set on-farm conservation within the context of plant genetic resource conservation as a whole, to introduces a possible generalised model for the conservation of genetic diversity on-farm and to promote debate around the science of on-farm conservation.  相似文献   

5.
Madagascar has 59 species of Coffea, of which 42 are listed as Critically Endangered, Endangered, or Vulnerable by criteria of the Red List Category system of the World Conservation Union. In an attempt to assess the conservation value of ex situ collections of Malagasy coffee species, a study was undertaken using the field genebank collections maintained at the Kianjavato Coffee Research Station. Three species were selected for this purpose, C. kianjavatensis, C. montis-sacri, and C. vatovavyensis, and for comparative purposes extant, in situ populations of the same species were studied. Parentage analyses of ex situ propagated offspring of C. kianjavatensis and C. montis-sacri were performed to assess if crossing with other Coffea species maintained in the field genebank is compromising the genetic integrity of the collection. For these three species, higher genetic diversity was observed in the ex situ populations compared to the in situ populations, highlighting the importance of preserving the plants currently in ex situ collections. Parentage analyses of seed-propagated offspring of C. kianjavatensis and C. montis-sacri revealed that cross contamination with pollen from other Coffea species in the ex situ field genebank is occurring. These results have significant implications for the conservation management of wild Coffea species and for the management of ex situ genebanks.  相似文献   

6.
Genetic diversity of populations stored ex situ or in situ can be altered due to the management practices they are subjected to. In this paper, we compare populations of two common bean (Phaseolus vulgaris L.) landraces grown on farms with material collected from the same farms and now kept in two ex situ collections (CIAT and REGEN) with the purpose to monitor any changes that have occurred due to ex situ conservation. The diversity was measured using seven bean microsatellite markers. Further phenotypic and developmental traits were registered in a field experiment. Compared with the in situ populations, the ex situ ones had a lower level of gene diversity and we suggest that this is due to the regeneration process. Most of the phenotypic traits did not differ significantly between ex situ and in situ populations, although for yield and 100-seed weight, the CIAT material showed significant lower values. We assume that these populations have gone through an adaptational change. Overall, the conservation ex situ has been successful in maintaining the majority of the adaptations found in the landraces studied, however, the probable loss of genetic diversity that we have observed, suggest that protocols for the regeneration process must be carefully worked out if the majority of alleles are to be preserved for the future. This study also highlights the complementarity of ex situ and in situ conservation methods in order to preserve landrace adaptations and to capture new, useful diversity generated in in situ populations.  相似文献   

7.
Maintaining seed viability and germplasm integrity is a challenging task in conservation of plant genetic resources, as seeds under storage will lose viability and genetic changes will occur. Attempt was made to analyze the patterns of genetic changes in wheat germplasm under ex situ genebank storage and accelerated ageing treatments. A set of 16 naturally aged wheat accessions under ex situ genebank storage since 1994 were sampled. Four recently regenerated wheat accessions were selected, four random seed samples were chosen from each accession, and three of them were exposed to three different accelerated ageing treatments. These 32 seed samples in two germplasm sets displayed a range of germination rates from 4 to 98 %. Thirty-seven microsatellite markers representing 21 wheat chromosomes were applied to screen 12 seeds of each sample and 449 SSR alleles were scored. Large SSR variation was found in each germplasm set. There was 73.1 % of the total SSR variation present among the naturally aged samples and 78.2 % present among the accelerated ageing samples. Several analyses for genetic association consistently revealed no clear genetic separations among samples of high or low germination rates in both germplasm sets. Samples under different accelerated ageing treatments did not show much genetic differentiations from the original sample of each accession. Mantel tests revealed non-significant associations between SSR variability and sample germination rates for both germplasm sets. These findings are useful for understanding seed deterioration under different ageing conditions and suggest that genome-wide SSR variability may not provide sensitive markers for the monitoring of wheat seed viability.  相似文献   

8.
RAPD polymorphisms were applied to check the efficiency of ex situ genetic conservation of endangered Vatica guangxiensis X. L. Mo. endemic to southwestern China. Low level of genetic variation was revealed in three remaining natural populations. Twenty random primers, each with 10 base pairs, generated 231 bands with 53.68% being polymorphic, and with an average of 32.46% being polymorphic in each natural population. Strong population differentiation was revealed by AMOVA (analysis of molecular variance) and Gst value was 0.3764. The population ML ex situ conserved in the Xishuangbanna Tropical Botanical Garden contained an intermediate genetic variation compared with natural populations, with 30.74% bands being polymorphic. Of the total 231 bands generated in V. guangxiensis, 204 bands were also detected in population ML, indicating that 88.31% of the total genetic variations of this species were conserved in ex situ population. If only the alleles with moderate to high frequency (P>0.05) were considered, 204 out of 209 bands (97.61%) occurred in ex situ population ML. RAPD analysis also detected one exclusive band in natural population NS, and five in natural population NP, three of these exclusive bands were generated in every samples of natural population (NP), and other three had moderate to high frequencies. While none of these exclusive bands were detected in ex situ conserved population ML. Our conclusions are that the ex situ conserved population ML contains representative genetic variation to maintain long-term survival and evolutionary process of V. guangxiensis, and that more extensive ex situ sampling in natural population NS and NP is needed to conserve more exclusive alleles in ex situ population. The tropical area in the Botanical Garden would play a more important role in the ex situ conservation of rare and endangered plants.  相似文献   

9.
Summary Eighteen different morphological and agronomical traits observed in a field collection of 148 accessions of Coffea arabica were analyzed using multivariate analysis. For the first time, a clear structure is observed within this species with the identification of two main groups. Accessions of group 1 have a more erect branching habit, narrower leaves and are on average more resistant to coffee leaf rust and coffee berry disease than accessions of group 2. Group 1 mostly contains Ethiopian accessions collected west of the Great Rift Valley, whereas group 2 mostly contain commonly cultivated varieties throughout the world and Ethiopian accessions collected east of the Great Rift Valley in Ethiopia. This phenotypic structure together with historical evidence suggest that group 1 has not been involved in the domestication of C. arabica. The present results confirm that sub-spontaneous genotypes west of the Rift Valley are highly valuable for enriching the genetic basis of cultivated C. arabica germplasm. The potential value of this material in breeding of C. arabica is discussed.  相似文献   

10.
Interest in bean genetic resources of Central America has resumed because of disease pressures (e.g., web blight, BGMV) and limitations of current bean varieties. As most of the diversity in landraces has been explored, focus is now on the exploration of wild forms of the primary gene pool and wild species of the secondary gene pool. A germplasm collection was carried out in the field and resulted in the collection of 29 wild populations for six Phaseolus species; it complemented field work done in 1987. Nine more populations were found for P. costaricensis, 10 for wild P. lunatus, one for P. oligospermus, one for P. tuerckheimii, four for wild P. vulgaris and four for P. xanthotrichus. Ninety-three herbarium voucher specimens were collected for 19 populations of the six species (deposited at CR). These results confirm the presence of wild P. vulgaris on both slopes of the central valley of Costa Rica, namely in the life zones bh-MB and bmh-P, and of P. costaricensis in the life zone bmh-MB. These life zones of limited range in Costa Rica have been heavily modified, thus fully justifying the germplasm collection for ex situ conservation. For both species the range of distribution in Costa Rica has been almost completely sampled. The life characteristics of each species that are relevant for their conservation in situ are briefly reviewed. Distribution ranges of each wild bean species are compared with the present extension of national parks, protected areas and fauna/flora sanctuaries, and suggestions for expanding such protected areas are made.  相似文献   

11.
Potato wild relatives are important sources of novel variation for the genetic improvement of the cultivated potato. Consequently, many natural populations have been sampled and were deposited as accessions in gene banks around the world. Here we investigate to what extent the genetic variation of Bolivian wild potato species is maintained under gene bank conditions and how this diversity relates to that of current in situ populations. For this purpose, materials from seven potato species were screened for microsatellite variation. Genetic changes between different generations of ex situ germplasm were not observed for Solanum leptophyes and S. megistacrolobum, but were detected for S. neocardenasii and S. okadae, while each of the species S. acaule, S. avilesii and S. berthaultii showed stability in some cases and genetic change in others. The observed changes were ascribed to genetic drift and contamination resulting from human error during regeneration. Re-collected populations of six of the studied species showed highly significant genetic differences with the ex situ accessions that, apart from changes during ex situ maintenance, are most likely to be attributed to sampling effects during collecting and in situ genetic changes over time. The implications of the results for ex situ and in situ conservation strategies of wild potato species are discussed.  相似文献   

12.
Ex situ conservation of genetic resources has contributed to the improvement of several food crops through utilisation of preserved germplasm, but it is not the only approach to safeguard genetic resources. Presently, in situ methods are being examined as effective complementary strategies to preserve diversity along with the dynamic environment. Examples of de facto on farm conservation, a form of in situ, have been described. However, their future is unpredictable without the relief of formal scientific projects or appropriate regulations. Recent European Community regulations have introduced the possibility to attribute marks of origin and quality to local typical products. These marks can be an important support to on farm maintenance of élite landraces of principal crops. In the frame of a collaboration between the Italian gene bank and a farm (of the agricultural research service of Basilicata region), an integrated approach, involving ex situ and on farm conservation, was adopted to safeguard common bean landraces from Basilicata. The main result of this project was the attribution of IGP (indication of geographic provenance), an European Community mark, to some tested landraces.  相似文献   

13.
African wild dogs are endangered, and in South Africa as elsewhere, they inhabit a fraction of their former range. In this study, we assessed the potential for economic benefits derived from ecotourism to offset the costs of three wild dog conservation options using a contingent valuation study of the willingness of visitors to four protected areas to pay to see wild dogs at the den - within a viable population in a large protected area (Kruger National Park), through reintroduction into nature reserves, and through the conservation of wild dogs occurring on ranchland in situ. Results indicated that tourism revenue from wild dogs in large protected areas is more than sufficient to offset the costs and could potentially be used to subsidise wild dog reintroductions or the conservation of wild dogs in situ on ranchland. On ranchland and for reintroductions, tourism revenue was generally predicted to offset most of the costs of conserving wild dogs where predation costs are low, and to exceed the costs where willingness to pay is high, and/or where the costs of predation by wild dogs are zero. Conservation efforts should facilitate the derivation of eco-tourism-related benefits from wild dogs on ranchland and in private reserves to create incentives for wild dog conservation. Ecotourism should be part of a multifaceted approach to wild dog conservation which also includes education and awareness campaigns, and efforts to encourage landowners to cooperate to form conservancies.  相似文献   

14.
The aim of this article is to provide an overview of the current situation of coffee genetic resources that are dwindling at an alarming rate in Ethiopia, the centre of diversity of Coffea arabica. Firstly, we describe the coffee growing systems (forest coffee, semi-forest coffee, garden coffee and plantation coffee) and recent research on the genetic diversity of the coffee planting material associated with those systems. Whilst the maximum genetic diversity revealed by DNA-based markers is found in the forest coffees of the south-western highlands, the natural habitat of C. arabica, the taxonomy of coffee landraces is particularly rich in garden coffee systems located in ancient growing zones such as Harerge in eastern Ethiopia. After reviewing the factors involved in the genetic erosion of the Ethiopian genepool, we give an update on the status of coffee genetic resources conserved ex situ in the field genebank of the Jimma Agricultural Research Centre, with 4,780 accessions spread over 10 research stations located in the main production areas, and in the main genebank of the Institute of Biodiversity Conservation located in Choche (Limu) with 5,196 accessions conserved. Lastly, we mention the in situ conservation operations currently being implemented in Ethiopia. Improving our knowledge of the genetic structure of Ethiopian forest and garden coffee tree populations as well as genetic resources conserved ex situ will help to plan the future conservation strategy for that country. To this end, modern tools as DNA-based markers should be used to increase our understanding of coffee genetic diversity and it is proposed, with the support of the international scientific community and donor organizations, to undertake a concerted effort to rescue highly threatened Arabica coffee genetic resources in Ethiopia.
Jean-Pierre LabouisseEmail:
  相似文献   

15.
Because it is virtually impossible to collect seed or tissue for ex situ conservation banks from every known population of rare plant species, it is important to rank populations systematically in terms of their priority for collection. The New England Wild Flower Society, which maintains a regional seed bank, developed a set of three complementary decision matrices in spreadsheet form by which to prioritize all occurrences of all state-listed rare plant species in New England in terms of their urgency and feasibility for collection. Data on 4333 occurrences, spanning 456 taxa, were collated from six state Natural Heritage Programs. The first decision matrix ranked taxa in terms of their amenability to storage or propagation at ex situ institutions, and determined whether any known New England occurrences were reproductive. The second matrix further ranked taxa in terms of their global and regional rarity and the viability and genetic and geographic representation of collections already present in the bank. The third matrix scored individual occurrences within each taxon in terms of the presence of imminent threat, reproductive status, vigor, protection status, potential genetic distance from other occurrences, availability of landowner permission, and their current status in the bank. Occurrences were then sorted in ascending order by total matrix score; those with low scores were at the top of the list for collection priority. 3743 occurrences were deemed eligible for collection. Scores ranged from 14.5 to 182, and were influenced most strongly by the number of occurrences per taxon. Clear breakpoints were apparent in the distribution of scores, with clusters of uncommon taxa at the low end of the scale and a long tail created by taxa with more numerous occurrences in New England. These breakpoints could potentially be used to prioritize groups of occurrences that should receive the first attention for collection, while postponing collection of higher-scoring groups. Fewer than 1% of occurrences were misclassified, according to post hoc inspection. This simple set of decision matrices can be adapted by a wide range of institutions involved in ex situ conservation.  相似文献   

16.
Amphibians are an important and imperiled component of biodiversity. In this study we analyze the efficacy of Italian reserve network for protecting multiple amphibian species in a climate change scenario, considering both nationally designated areas and Natura 2000 sites. Our approach is based on ensemble niche modeling estimate of potential range shift under two carbon emission scenarios (A1FI and B1) and two dispersal assumptions. The predicted distributions were used to perform gap and irreplaceability analyses. Our findings show that the current Italian reserve network incompletely represents current amphibian diversity and its geographic pattern. The combination of the nationally designated protected areas and the Natura 2000 sites improves current representation of amphibians, but conservation targets based on geographic range extent are achieved for only 40% of species. Under the future scenarios, Natura 2000 sites become a crucial component of the protected areas system. Nonetheless, we predict that climate change decreases for many species the amount of suitable range falling into reserves, regardless of our assumptions about dispersal. We identify some currently unprotected areas that have high irreplaceability scores for species conservation and that maintain their importance under all the future scenarios we considered. We recommend designation of new reserves in these areas to help guarantee long-term amphibian conservation.  相似文献   

17.
The aim of this paper is to contribute directly to the systematic, long-term conservation of crop wild relatives (CWR) in the Fertile Crescent by setting conservation priorities to secure and improve CWR conservation in situ and ex situ as a means of underpinning global food security. We established the first priority list of CWR within the Fertile Crescent following several criteria comprising production value (m × p), projected production value (m × p), production area (ha), projected production area (ha), native status, energy supply (kcal/capita/day), protein supply (g/capita/day), fat supply (g/capita/day), occurrence status, gene pool, taxon group, and threat status. An inventory of 220 priority CWR was established for the Fertile Crescent region. We followed twelve prioritisation approaches and assessed 21,080 species. About 4% of the total species (835 species) were identified as CWR that have socio-economic value for the region. These 835 CWR species were prioritised to create the CWR priority list which consisted of 220 species (1% of the total species assessed). The majority of the CWR priority list (185 species) were related to cereal, vegetable, and industrial crops and 35 of them are related to fruits and trees. The CWR priority list includes crop wild relatives of the genera Aegilops (20 species), Lactuca (11 species), Avena (11 species), Carthamus (11 species), Allium (9 species), Thinopyrum (10 species), and Triticum (3 species). We present the first inventory of 220 priority CWR for the Fertile Crescent. The inventory helps to improve in situ and ex situ conservation and the genetic diversity of CWR. Both the inventory and the methodology applied in prioritisation can be used in setting national, regional, and global conservation strategies. The recommendations will help the Fertile Crescent meet its targets in conserving CWR diversity as well as making sure that CWR genetic resources are preserved to prevent and tackle global food insecurity.  相似文献   

18.
The number of ex situ conservation facilities has grown dramatically in recent years, and they have become increasingly integrated under national and regional conservation initiatives. However, little information is available about the extent to which plant species are appropriately represented in ex situ collections. This paper assesses whether seed/spore collections stored in European seed banks cover or not, and to what extent, the species currently threatened with extinction in the wild. Although a substantial amount of the European flora (ca. 70%) is currently stored in seed banks, we highlight the relatively poor representation of threatened species: only 27% of the taxa listed on the European threatened plant list and 44% of the taxa listed in Annex II of the EU Habitat Directive are stored in European seed banks. Some taxonomical groups most at risk, e.g. Pteridophytes and Orchidaceae, are also under-represented in European seed banks. By examining the number of accessions per species and the number of seeds per accession, this study also gave some insight on how well species are conserved, considering that these two variables are surrogates for genetic diversity. We have highlighted that at least two thirds of the threatened species stored in European seed banks likely suffer from too low genetic diversity in the collections. These analyses were essential to identify those collections and additionally the standards needed to maximize the usefulness of future collections.  相似文献   

19.
RAPD markers were used to investigate the distribution of genetic variability in a germplasm collection of the dioecious tropical tree Aroeira (Myracrodruon urundeuva) composed of open pollinated maternal half-sib families collected from trees at least 300 meters apart and grouped in nine collection areas throughout its geographical range in Brazil. Open pollinated families from nearby trees from two natural populations were also included in the study. A Principal Coordinate Analysis (PCO) based on genetic similarities estimated with 83 RAPD markers showed no defined clustering among individuals from the same collection areas. However, a matrix correlation test showed low, but significant correlation between genetic and geographic distances (r = 0.17; p < 0.02). An AMOVA showed that 92% of the genetic variation is found within collection areas. Significant variation was found both between regions and between areas within regions although only 3.54 and 4.44% of the variation was found at these levels respectively. An AMOVA on the individuals from the two natural populations resulted in a pattern of distribution congruent to the one found for the collection areas, with 97% of variability within populations. An analysis of 10 open-pollinated half-sib families revealed that between 75% and 89% of the variability is contained within families, suggesting that seeds from one tree represent a significant proportion of the variability found in the population. These results indicate that, either for the establishment of in situ genetic reserves or for ex situ conservation, efforts should be directed to the conservation of several individual trees or collection of open pollinated seed families in a few distant sites. In addition, if resources are available to enlarge the genetic base of the existing collection, expeditions should prioritize collection sites located in areas at significant distances to those already sampled.  相似文献   

20.
We tested the prediction that climate-driven changes might alter bird species composition in reserves of the Cerrado region of Brazil. First, we modelled the current distributions and the potential future projections of 38 endemic or rare bird species. We used eight modelling techniques within the BIOMOD computational framework in an ensemble-forecasting approach to reach a consensus scenario. Then we compared current and future (2046-2060) distributions under different scenarios (reserve size and bird dispersal) with the current Brazilian reserve system to assess the adequacy of protection (representation) of each species and detect gaps in their protection. Finally, to identify areas with high probability of occurrence of several species, we calculated cumulative climatic suitability of all 38 species for both current and future scenarios. None of the 38 species is covered under any current or future scenarios, revealing that the current reserve system is highly inefficient in conserving the analyzed bird species. The implementation of new reserves to cover species in current and future climate scenarios is recommended in areas in the south-eastern part of the Cerrado region and in the mountains of east Brazil. Due to the already high land use of the southeast region of the Cerrado, the application of non-traditional conservation measures should be evaluated.  相似文献   

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