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1.
Maintaining sufficient viability is critical to the sustainability of ex situ conserved seed collections. For this reason, accessions are regenerated when viability falls below a predefined threshold. Viability is monitored by determining the germination ability of accessions at predefined time intervals. Optimizing the frequency of these germination tests, in order to avoid waste of resources, is hampered by the scarce availability of data about seed longevity, particularly for material maintained under genebank conditions. Here we report on the analysis of nearly 40,000 germination test results collected for a wide range of crop species over a 25-years period by the centre for genetic resources, the Netherlands (CGN), where seeds of genebank accessions are dried to 3–7 % moisture content and stored for the long term under near-vacuum in aluminium foil bags at ?20 °C. The results indicate that seed viability is well maintained for the large majority of seed lots during the first 25 years after regeneration as only 3.3 % of the monitoring tests revealed below-threshold germination values. It is argued that the majority of these sub-standard seed lots are due to other causes than seed ageing, including dormancy problems and estimation error in germination testing. For material, maintained under the seed management procedures and storage conditions practiced by CGN, it is therefore recommended to delay the first germination monitoring tests to 25 years after regeneration.  相似文献   

2.
A standard electrophoretic method for wheat cultivar identification was used on single seeds to analyse the genetic integrity of 11 wheat (Triticum aestivum L.) accessions after up to 24 seed reproductions in the Gatersleben genebank. It was clearly demonstrated that the gliadin pattern of single seeds can be used to analyse the genotype composition of wheat accessions. Stability of electrophoretic banding patterns was detected in eight accessions. Very week genetic drift was observed in three accessions. Our investigations confirm experiences of the successful utilisation of protein markers for cultivar verification and genetic integrity testing and demonstrate the high standard of wheat accessions maintenance in the Gatersleben genebank.  相似文献   

3.
At the genebank of IPK (Leibniz Institute of Plant Genetics and Crop Plant Research) in Gatersleben, Germany, three long-term conservation methods (field genebank, in vitro slow-growth and cryopreservation) are used for mint germplasm. The plant material of the field genebank was the source to establish the slow-growth in vitro culture collection, from which the cryopreserved collection was set up, using a droplet-vitrification protocol. The genetic identity of 161 samples of three mint accessions (MEN 198, MEN 166 and MEN 186), stored for several years using those three methods, was studied using RAPD markers. Accession ‘MEN 198’ was the only one with a unique RAPD fragment pattern for all its samples, independently of the conservation procedure employed. The field collections of accessions ‘MEN 166’ and ‘MEN 186’ were made up of different genotypes. None of the genotypes detected in the plots of these accessions was represented in the in vitro and cryopreserved samples analyzed, which showed a unique genotype for each accession. From this work we conclude that, for an appropriate management of a germplasm collection of vegetatively propagated species, the determination of the genetic composition of the donor material and a periodical assessment of the preserved material should be carried out.  相似文献   

4.
Genebanks maintaining seeds for long-term genetic resources conservation monitor seed lots to detect early loss in viability. Monitoring is costly and depletes valuable seed. Three decades of genebank seed germination test results of diverse forage species from 50 legume genera in the International Livestock Research Institute’s medium-term store (circa 8 °C with 5% moisture content) were analysed to determine whether advice on seed monitoring intervals could be derived. Cumulative normal distributions were fitted by probit analysis for each seed lot and compared within each genus. Six patterns of within-genus variation were identified: no detectable trend in germination test results during storage (4 genera); detectable trends, but variable (positive to negative) amongst lots (5); consistent slope of loss in viability amongst lots (17); consistent slope of increase in ability to germinate amongst lots (21); common loss in viability amongst lots (2); common increase in ability to germinate amongst lots (1). Seed lot monitoring intervals for the medium-term store were derived for each of 19 genera with consistent loss in viability across seed lots: three genera provided comparatively rapid deterioration, five met the general expectations for a medium-term store (2–10 years’ maintenance of high viability), whilst 11 provided much better survival. Moreover, 26 further genera provided no evidence as yet of seed deterioration; of these, 22 improved in ability to germinate during storage indicating confounding of hardseededness with viability in germination tests.  相似文献   

5.
Germination ability, equilibrium relative humidity (eRH), and moisture content of ‘control’ seed samples representing 183 rice accessions stored in the active (2–4 °C) and base (?10 °C until 1993, then ?20 °C) collections of the T. T. Chang Genetic Resources Center were determined after storage for 20.5–30.5 years. Germination of seeds that had been stored in the base collection was generally high (>70 %), whereas germination was more variable for seeds stored in the active collection. Samples with lower viability after storage in the active collection were likely to have lower viability after storage in the base collection. There were significant differences in the moisture content-eRH relationship of the seeds depending on whether the seeds had been stored in the active or base collection. Based on re-test data for regular seed samples regenerated in 1979–1980 and stored in the active collection for up to 31 years, estimates of the time for ability to germinate to fall to 50 % (p 50) ranged from 54 to 997 years. For the same seed samples stored in the base collection for approximately 31 years, ability to germinate has been maintained and germination increased due to improved procedures. The ability to germinate of base collection samples was also generally higher than that of ‘safety duplicate’ samples of the same seed lots that had been sent to the National Center for Genetic Resources Preservation, USA in 1981 and stored at ?18 °C. This may have been due to uptake of moisture either during processing for dispatch or as a consequence of poor packaging material. The results are discussed in relation to long-term seed storage and genebank management.  相似文献   

6.
Glutenin largely determines wheat bread baking quality. As high-molecular-weight glutenin subunit (HMW-GS), related to Glu-1 loci, determines wheat flour elasticity, it correlates strongly with bread-making quality. This study was aimed at clarifying genetic variations in bread-making characteristics between East and West Asian wheat landrace germplasms, by investigating HMW-GS allelic composition of 1068 wheat accessions. Herein, the accession number having reported HMW-GS pattern in previous studies was 855. However, the accession number with newly detected HMW-GS patterns was 114. These new HMW-GS patterns were classified into 4 types based on similarity. Eight Korean accessions with these four types were identified. Concerning landrace germplasm nature, 99 accessions showed heterogeneous patterns caused by seed mixture. The Glu-1 loci allelic variation analysis, revealed that the percentages of Glu-A1c (73.6%), Glu-B1b (60.2%), and Glu-D1a (68.5%) were highest at Glu-A1, Glu-B1, and Glu-D1 loci, respectively. The incidence of preferable alleles for bread baking was high in Chinese accessions. In bread-making quality evaluation using Glu-1 score, 24 among 35 accessions with full score were from China. The polymorphic information content index of each origin based on HMW glutenin subunit combination showed that West Asian and neighboring-regional landraces, excluding Afghanistan ones, were more diverse than East Asian landraces excluding Chinese ones. Cluster analysis based on Glu-1 allelic combination showed that many Korean, Japanese, and Afghan accessions were in the same group. However, many Chinese and other West Asian accessions were in the other group despite geographical distance.  相似文献   

7.
Cultivated Chinese wheat germplasm has been a valuable genetic resourcein international plant breeding. Landraces endemic to China are a geneticresource that is distinct from other wheat germplasm. Patterns of geneticdiversity among cultivated Chinese accessions and relationship to othergermplasm pools are unknown, despite the proven value and potential novelty. Theobjective of this work was to determine the level of genetic diversity withinimproved Chinese germplasm in the context of several other wheat germplasmpools. We analyzed a set of improved accessions cultivated from the 1940s to the1990s in Shaanxi province, China, using six simple sequence repeat (SSR) primerpairs and 30 restriction fragment length polymorphism - probe enzymecombinations (RFLP-PEC) previously used to characterize 21 geographically basedgermplasm pools. Shaanxi germplasm consists of three groups based on foreignintroductions from Italy, Australia, Denmark, and Russia. There was a decreasein genetic diversity among Shaanxi accessions cultivated in the 1970s and 1980sto the 1990s, and accession classifications based on primary decade ofcultivation were found to be significantly undifferentiated. The analysis of themean genetic distance among 22 geographically based pools of germplasm suggestsseveral regions are significantly undifferentiated. A vast majority of the totalamount of variation was found within pools; therefore, pools appear to belargely differentiated based on small differences in band relative frequency andfew if any unique bands. Previous studies have identified some Chinese landracepools as morphologically and genetically unique. The Shaanxi pool does not havethe same unique morphological or genetic features, nor is it more similar to thelandrace pools than other improved germplasm pools.  相似文献   

8.
Qualitative and quantitative changes in populations of meadow fescue (Festuca pratensis Huds.) after seed storage under different conditions were estimated. Phenotypic characters of plants grown from seeds stored for 54 months under two different storage conditions were compared. The germination of most of the seed accessions stored under favourable conditions remained at the initial level while storage under unfavourable conditions resulted in a decrease of the initial germination percentage as well as in an increase in the number of plants showing chlorophyll aberrations. There is great variability among the accessions resulting from storage under unfavourable conditions. In case of a few accessions a decrease in germination below 35% resulted in chlorophyll aberrations, faster flowering, shorter inflorescence and reduced viability of pollen grains.  相似文献   

9.
The characterization of plant genetic resources is the first step towards improving their use. The Spanish Plant Genetic Resources Centre, which belongs to the National Institute for Agricultural and Food Technology Research (CRF-INIA), conserves accessions of wild underground vetches collected in Spain. In the present work, 26 underground vetch accessions were characterized in terms of their seed storage proteins (separated by SDS-PAGE) as a means of assessing the genetic variation of these plants and their agronomic value. Vicia sativa cv. Vereda was used as control. A total of 54 bands were detected, of which 49 were polymorphic. Fifty eight different electrophoretic patterns were observed in total. Protein bands were scored in terms of their presence (1) or absence (0) for all the seeds studied, and two matrices constructed, one with all the bands present in each accession, the other with the different patterns for each accession. Dendrograms based on the Jaccard similarity index and the UPGMA clustering method were produced from these matrices, and the degree of genetic variation between and within accessions was calculated. The groups obtained were compared with the chromosome number for each accession. The results reflect the great diversity of underground vetch seed storage proteins. The aerial and underground seeds of 16 accessions were then analysed separately. In some cases, the aerial and underground flowers of the same plant produced different proteins.  相似文献   

10.
Germplasm conserved as seeds in genebanks requires regular regeneration. In this process, selection and genetic drift may cause loss of genetic diversity from accessions. In the case of selfing crops, separation of distinct lines into different accessions may be an efficient strategy to avoid these negative effects. In order to evaluate the applicability of this method for collection management, knowledge about the level of intra-accession genetic diversity is required. By means of AFLP analysis intra-accession variation was investigated in two cultivars, two landraces and two wild populations of ex situ conserved barley germplasm. In the total sample of 216 individuals analysed (36 per accession), 22 genotypes were observed based on 104 polymorphic loci. The number of genotypes detected ranged from 1 to 3 per accession, except for a Nepalese landrace that revealed 12 genotypes. An UPGMA cluster analysis grouped the genotypes unambiguously into the accession they belonged to and genotypes within accessions were generally found to be closely related. In order to determine the repeatability of the results obtained, 11 individuals belonging to 4 genotypes from the Nepalese landrace were scored for a second set of AFLP markers. Matrices of genetic distances calculated for the two AFLP datasets were found to be highly correlated (r = 0.9346, P < 0.001). Separation of genotypes into different accessions was considered a relevant option only for the Nepalese landrace. Analysis of molecular variance indicated that this accession could be well divided into 8 distinct lines. Further implications of the results for genebank practices are discussed.  相似文献   

11.
Germplasm conservation of medicinal plants is of increasing interest and, when possible, seed banking is the most efficient system for ex situ conservation of these plant genetic resources. Hypericum perforatum L. (St. John's wort, Guttiferae) is a medicinal plant with evidence of efficacy as an anti-depressant. The aim of this work was to increase knowledge of its seed germination behaviour by studying 68 wild populations. Seed germination tests were carried out at 25/15 °C under a photoperiod of 16-h light/8-h darkness. Final germination percentages were highly variable depending on the accession, ranging from 6 to 98%. Similarly, germination rate (as expressed by T 50 values) varied significantly from 6.1 to 23.0 days. The effect of seed desiccation with silica gel on subsequent germination was also studied. The effect of two other incubation temperatures (15 and 25 °C) and light (photoperiod or darkness) on seed germination was studied in several accessions. Temperature had no significant effect on final germination percentages. However, light significantly increased the germination of most but not all accessions assayed. Seeds from four accessions with low germination percentages were subjected to different presowing treatments that could increase germination: dry heat, hot water and gibberellic acid. Germination was promoted significantly by gibberellic acid in two of the four accessions assayed, but the thermal treatments did not enhance significantly the germination percentages. This study reveals that conclusions based on one population of Hypericum perforatum cannot characterize the germination behaviour for the entire species.  相似文献   

12.
Seed quality is a critical aspect in agriculture as well as in the long-term conservation of plant genetic resources in genebanks. Since potential seed longevity depends on initial quality, genebank curators need to be aware of the best management practices that contribute to the production of high quality seed during routine germplasm regeneration/multiplication. Among the factors influencing initial seed quality, those related to crop management, including plant nutrient and water supply during crop growth, climatic conditions during seed development and maturation, as well as the harvest and drying practices are of considerable significance. Seeds of high quality can be obtained by planting in suitable areas/fields and at appropriate times, applying good crop management practices, adoption of proper harvesting and drying techniques, careful handling and processing to minimize mechanical injuries and unwanted seed mixing with other accessions, and ensuring minimum deterioration before reaching the designated storage. However, seed production and post-harvest handling highly depend on the biology and agronomy of the species. As germplasm collections contain a wide range of diversity for morphological and agronomic characters and that there might well be critical gaps in knowledge among genebank staff or about the species in question, genebanks may also need to embark on research to gain crop specific knowledge on optimal seed production procedures to improve seed quality.  相似文献   

13.
During a national Swedish collection mission of vegetable varieties conserved ‘on farm’ more than 70 pea accessions were obtained, many of which had been grown locally for more than 100 years. In spite of a likely origin in the multitude of obsolete commercial pea varieties available on the Swedish seed market in the nineteenth century, the rediscovered local cultivars have lost their original names and cultivar identity while being maintained ‘on farm’. To analyze genetic diversity in the repatriated material, 20 accessions were genotyped with twelve SSR markers and compared with 15 obsolete cultivars kept in genebanks and 13 cultivars preserved as non-viable seeds collected in 1877–1918. Most of the local cultivars were genetically distinct from each other, and in only a few cases could a possible origin in a tested obsolete cultivar be suggested. These results reflect the wide diversity of pea cultivars present in Sweden during the nineteenth century. Both between and within accession genetic diversity was larger among the historical samples of obsolete cultivars compared to local cultivars and cultivars preserved in genebanks, indicating genetic erosion over time both in genebanks and during conservation ‘on farm’. The constraints on identifying and verifying historical cultivars using genetic markers are discussed.  相似文献   

14.
This study describes the genetic differentiation of a collection of 134 watermelon landrace accessions from Mali, representing red fleshed dessert and white fleshed seed and cooking type watermelons from five regions, plus three commercial dessert type cultivars with red flesh. The material was represented by in total 397 plants and was analysed using 24 microsatellite primer sets, which differentiated 129 alleles across all loci. Analyses of molecular variance ascribed 51 % of the variation among the landrace accessions, and 14 % of the variation could be ascribed to the regions. Partitioning the accessions into use groups (dessert, cooking, seed processing) explained 25 % of the variation. When categorising the accessions further into 10 landrace types, differentiated on the basis of use groups, local accession name, flesh colour and seed phenotype, these landrace types explained 26 % of the variation. Analysis with the software Structure revealed that the accessions with confidence could be separated into two major genetic groups, related to flesh colour (red and white) of the watermelon fruits. The same analysis further indicated that the material may be differentiated into eight genetic sub-groups. One group included again the red fleshed dessert types with local and commercial origin, while the remaining seven genetic sub-groups comprised the white fleshed landrace types used for seed processing and cooking, as well as white fleshed types of one dessert type. Some of the seed and cooking types were to a large extent different and assigned to one genetic sub-group each. A Mantel test, based on geographical and genetic distance matrices showed a positive correlation, indicating that seed exchange has not overcome local adaptation.  相似文献   

15.
Landrace accessions have long been recognized as an important source of genetic diversity for crop species, and landraces are stored in genebanks across the world as genetic resources for future crop development. Landraces are also an important part of the human cultural heritage and as such they have been used for genetic studies to make inferences about historical agriculture. However, surprisingly little is known about the within-accession diversity of landrace crops of different species. In order to evaluate the diversity of Swedish landraces we used microsatellite markers to genotype accessions of four species (barley, pea, oats and rye), both extant genebank material and 114-year-old seed samples of similar geographic origin and type. We found consistently high levels of within-population genetic diversity in the historical material, but varying and often lower diversity levels in the genebank accessions. We also make tentative conclusions about how representative the genebank material is to what was originally cultivated in its reported area of origin and suggest that the true identity of the genebank accessions is unclear and that historical seed collections should be a more appropriate material for the study of historical agriculture.  相似文献   

16.
Interest in so‐called ancient wheats (einkorn, emmer, oriental wheat, and spelt) has increased steadily in the last few decades. Oriental wheat (Triticum turgidum L. subsp. turanicum (Jakubz.) (A. Lőve & D. Lőve) is a neglected and underutilized tetraploid species that has survived over the centuries in some areas of the Near East and central Asia. Very little attention has been devoted by researchers to the evaluation and characterization of the oriental wheat germplasm. Knowledge of the variation of seed storage proteins within a germplasm collection is very useful for breeders interested in increasing the genetic bases of modern wheat cultivars. In this study, capillary zone electrophoresis (CZE) was used to analyze the gliadin and albumin extracts relative to 74 accessions belonging to the oriental wheat collection maintained at the USDA gene bank. Fourteen gliadin patterns were observed. Among the six most frequent patterns, one was widely predominant, being observed in 29 accessions, whereas eight were single types. Two profiles showing similar frequencies within the collection together with six single types were recognized for the albumins. The combination of the observed gliadin and albumin profiles gave rise to 25 combinations. In general, accessions collected in the same country shared the same combinations. This suggests that some accessions could be duplicates of the same genetic stock. Accessions collected in Iran and Turkey, which are indicated as the countries in which oriental wheat originated, were characterized by a higher degree of polymorphism.  相似文献   

17.
Wild melon diversity in India (Punjab State)   总被引：1，自引：1，他引：0  
We present here the first comprehensive genetic characterization of wild melon accessions from northern India. The genetic diversity among 43 wild melon accessions collected from the six agro-ecological regions of the Punjab State of India was assessed by measuring variation at 16 Simple Sequence Repeat (SSR) loci, morphological traits of plant habit and fruit morphological traits, two yield-associated traits, root nematode resistance and biochemical composition (ascorbic acid, carotenoids, titrable acidity). Variation among accessions was observed in plant habit and fruit traits and wild melon germplasm with high acidity and elevated carotenoid content and possessing resistance to Meloidogyne incognita was identified in the collection. A high level of genetic variability in wild melon germplasm was suggested by SSR analysis. Comparative analysis using SSRs of the genetic variability between wild melons from the north and other melons from the south and east regions of India and also reference accessions of cultivated melon from Spain, Japan, Korea, Maldives, Iraq and Israel, showed regional differentiation among Indian melon accessions and that Indian germplasm was not closely related to melon accessions from other parts of the world. A highly drought tolerant accession belonging to var. agrestis Naud. was also identified.  相似文献   

18.
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19.
An effluent sample was collected from the acid bath of a metal engraving plant where the sample had been pretreated with lime to pH 10.6. The sample was adjusted to pH 7.37 (and in a second test to 7.25) and diluted to a series of solutions using hard, standard water. The seed germination thod was employed to test the phytotoxicity of the sample to ten plant species. The experimental results of this study compared to previous studies indicated that cabbage, carrot, Japanese millet, oat, and wheat lost some viability during storage. The germination rates of these species fell below 85% in this study, although the rates of cabbage, Japanese millet, and wheat were above 85% in the previous studies. Of the remaining species with adequate germination rates, cucumber and white proso millet were relatively insensitive to the effluent toxicity. The promising candidates for toxicity testing were rice, lettuce, and tomato, based on long shelf life, high germination rate and sensitivity to toxicity.  相似文献   

20.
Collections of plant genetic resources managed by genebanks function to conserve the range of genetic diversity present in crop genepools. They can facilitate access to valuable allelic variation for both plant breeders and researchers who are able to request germplasm for use in crop improvement and both basic and applied scientific research. The direct impact of genebank collections is often unclear as downstream uses of germplasm samples may not be reported back to the genebank of origin. This study aims to systematically review scientific use of germplasm using the UK Vegetable Genebank (UKVGB) as a model. Between the years of 1980–2016, a total of 271 publications were identified as using UKVGB material. The frequency of publications and the international nature of use increased significantly over the time period studied. Accessions directly sourced from the UKVGB made up the majority of material used by researchers, but material from research-derived resources such as differential sets and core collections or diversity sets have also been used. Resistance to pests and diseases and genetic diversity were the main topics of study although germplasm was used to address a wide range of other research questions. Genebanks such as UKVGB provide an essential resource of allelic diversity in crop genepools which supports a diverse range of research projects. The utilisation of these plant genetic resources has increased over time, contributing to a substantial number of publications. Developments in sequencing technologies have no doubt played a part as larger numbers of accessions can be utilized in a single experiment, but the increase also no doubt reflects a greater interest in the use of allelic diversity to overcome challenges in crop improvement and research.  相似文献   

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