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1.
Horizontal gene transfer is useful for enhancing bioremediation through gene bioaugmentation. However, factors affecting transfer of degradative plasmids have not been systematically addressed. To this end, plasmid transfer experiments were performed using a TOL-like plasmid carrying the gene encoding for catechol 2,3-dioxygenase (C23O) between two soil bacteria under different conditions. Transfer frequency increased with air temperature in the range of 10–35 °C and reached 6 × 10−4 transconjugants per donor cell at 35 °C. The transfer frequency detected at soil depth 5–10 cm was significantly higher (p < 0.05) compared with other depths. Addition of 5–75% LB in the microbial inoculum promoted plasmid transfer frequencies. Addition of phenol to the experimental system resulted in significantly higher transfer frequency (p < 0.05) compared with no addition. Transfer frequency heat-moisture in loam was significantly higher (p < 0.05) than in other soils. The highest transfer frequency was found in the experiment containing tomato seedlings, with up to about 1.3 × 10−3 transconjugants per donor cell. Corn and wheat seedlings also led to significantly higher transfer frequencies (p < 0.05) compared with no plants. Furthermore, C23O activities of transconjugants formed under different conditions were measured, as a surrogate measure of the activity of transconjugant. Transfer temperature, soil and plant types had a minor influence on activities of transconjugants. Topsoil (0–5 cm) transconjugants expressed C23O more efficiently under normal incubation condition, but less efficiently when soils incubated with excessive LB medium concentrations, and in the absence of phenol in soil. These results suggested that transfer temperature, soil depth, dilutions of LB broth, phenol content, and soil and plant types had important effects on transfer of the TOL-like plasmid in soil, and some factors also affected activities of transconjugants.  相似文献   

2.
The study evaluated the effects of soil intra-aggregate pore distributions on movement and fate of E. coli (a global indicator of fecal pollution) within soil aggregates. The first objective was to characterize pore structure of intact soil aggregates (4–6 mm in size) using X-ray computed microtomography and to quantify the differences in pore structures of the aggregates from the same soil type but under >18 year contrasting land use and management settings. The studied settings were (i) conventionally plowed row crop (CT), (ii) no-till row crop (NT), and (iii) native succession vegetation (NS) treatments from Long Term Ecological Research site, W.K. Kellogg Biological Station, southwest Michigan. The second objective was to examine spatial distribution of E. coli introduced into the aggregates and the relationships between E. coli distributions and intra-aggregate pores. The results indicated that E. coli distribution in the aggregates was driven by specific configurations of the intra-aggregate pores. When the aggregates’ initial water contents were relatively low, presence of large (>100 μm) pores in the aggregate interiors limited water and thus E. coli entry. Such centrally located large pores were more abundant in the aggregates from NT and NS treatments as compared to CT aggregates. Medium-sized pores (30–60 μm) were more abundant in the aggregates from CT soil and such pores were relatively homogeneously distributed through entire bodies of CT aggregates. Thus, upon entering the aggregate, E. coli became more uniformly distributed through the CT aggregates, while in NT and NS aggregates it more commonly remained in the aggregate exterior parts without reaching the interiors. Implications of these distributional patterns for E. coli survival and re-entering water flow in soil under different land use need to be addressed in further studies.  相似文献   

3.
《Applied soil ecology》2003,22(3):205-210
We examined the response of the temperature coefficient (Q10) for soil respiration rate to changes in environmental temperature through a laboratory incubation experiment. Soil samples were collected from three climatic areas: arctic (Svalbard, Norway), temperate (Tsukuba, Japan) and tropical (Pasoh, Malaysia). The arctic and temperate soils were incubated at 8 °C (control), 12 °C (4 °C warming) and 16 °C (8 °C warming) for 17 days. The tropical soil was incubated at 16 °C (8 °C cooling), 24 °C (control) and 32 °C (8 °C warming). Before and after the incubation experiment, the temperature dependence of soil microbial respiration was measured using an open-airflow method with IRGA by changing the temperature in a water bath. The initial Q10 before the incubation experiment was larger in the soils from higher latitudes: 3.4 in the arctic soil, 2.9 in the temperate soil, and 2.1 in the tropical soil. The response of the microbial respiration rate to change in temperature differed among the three soil types. The temperature dependence of respiration rate in the arctic soil did not change in response to warming by 4 and 8 °C with a Q10 of about 3. On the other hand, the Q10 in the temperate soil decreased with increasing incubation temperature: from 2.8 in soils incubated at 8 °C to 2.5 at 12 °C and 2.0 at 16 °C. In the tropical soil, the Q10 was not changed even by the 8 °C warming with a value of 2.1, whereas the Q10 was increased from 2.1 to 2.7 by the 8 °C cooling. These results suggest that the response of microbial respiration to climatic warming may differ between soils from different latitudes.  相似文献   

4.
It is known that carbon (C) amendments increase microbial activity in anoxic soil microcosm studies, however the effects on abundance of total and denitrifier bacterial communities is uncertain. Quantitative PCR was used to target the 16S rRNA gene for the total bacterial community, the nosZ functional gene to reflect a broad denitrifier community, and functional genes from narrow denitrifier communities represented by Pseudomonas mandelii and related species (cnorBP) and Bosea/Bradyrhizobium/Ensifer spp. (cnorBB). Repacked soil cores were amended with varying amounts of glucose and red clover plant tissue (0–1000 mg C kg? 1 of soil) and incubated for 96 h. Carbon amendment significantly increased respiration as measured by cumulative CO2 emissions. Inputs of red clover or glucose at 1000 mg C kg? 1 of soil caused increased abundance in the total bacteria under the conditions used. There was about an approximate 2-fold increase in the abundance of bacteria bearing the nosZ gene, but only in treatments receiving 500 or 1000 mg C kg? 1 of soil of glucose or red clover, respectively. Additions of ≥ 500 mg C kg? 1 soil of red clover and ≥ 250 mg C kg? 1 of glucose increased cnorBP-gene bearing denitrifiers. Changes in abundance of the targeted communities were related to C availability in soil, as indicated by soil respiration, regardless of C source. Applications of C amendments at rates that would occur in agricultural soils not only increase microbial activity, but can also induce changes in abundance of total bacterial and denitrifier communities in studies of anoxic soil microcosms.  相似文献   

5.
The large-scale production of biochar for carbon sequestration provides an opportunity for using these materials as inoculum carriers to deliver plant growth-promoting rhizobacteria (PGPR) into agricultural soils. Here, we evaluated the suitability of a biochar produced from pinewood pyrolyzed at 300 °C as a carrier for a well-studied PGPR strain, Enterobacter cloacae UW5. This strain was genetically modified to produce a green fluorescent protein marker that enabled tracking of the inoculum. Results from selective plate count assays and quantitative PCR (qPCR) confirmed that cell survival was slightly improved by addition of bacteria to soil using biochar as a carrier for the inoculant, as compared to soil directly inoculated. Total 16S rRNA genes were quantified using qPCR and DNA templates from the same soil treatments to distinguish the impact of biochar on total bacterial abundance from its influence on inoculum survival. Here total bacterial abundance was not influenced by biochar. All treatments resulted in bacterial colonization of roots at population densities of approximately 105 CFU g−1 root mass. Cucumber plants grown in the biochar amended soils had significantly greater biomass and root development than those planted in un-amended soil, regardless of the presence of inoculum. The ability of bacteria to colonize the plant roots and produce a plant growth hormone was not affected by biochar. However, UW5 inoculum did not promote root development in cucumber in any of the soils tested here. Overall, these experiments suggest that the 300 °C pine biochar is effective for evenly distributing inoculum into soil and promotes cucumber development in sandy loams.  相似文献   

6.
An improved method for the direct extraction of DNA from soil involving processing of a relatively large sample (60 g) was developed. The accurate and reliable detection and quantification of the soil-borne potato pathogens Colletotrichum coccodes (black dot), Rhizoctonia solani (black scurf) and Spongospora subterranea (powdery scab) following inoculation of soils was demonstrated. With this method, low levels of target DNA (30–40 pg DNA/g soil) could be detected in field soils. DNA recovery was proportionate across a wide range of inoculum (R2 > 0.86) and there was no effect of soil type on the recovery of C. coccodes. The method was used to assess levels of naturally occurring pathogen DNA in 122 soil samples obtained from commercial potato fields.  相似文献   

7.
A real-time PCR assay was developed to quantify in soil the fungus Hirsutella minnesotensis, an important parasite of secondary-stage juvenile (J2) of the soybean cyst nematode. A primer pair 5′-GGGAGGCCCGGTGGA-3′ and 5′-TGATCCGAGGTCAACTTCTGAA-3′ and a TaqMan probe 5′-CGTCCGCCGTAAAACGCCCAAC-3′ were designed based on the sequence of the ITS region of the rRNA gene. The primers were highly species-specific. The PCR reaction system was very sensitive and able to detect as few as 4 conidia g?1 soil. Regression analysis showed similar slopes and efficiency on DNA from pure culture (y = ?3.587x + 41.017, R2 = 0.9971, E = 0.9055) and from Log conidia g?1 soil (y = ?3.855x + 37.669, R2 = 0.9139, E = 0.8172), indicating that the real-time PCR protocol can reliably quantify H. minnesotensis in the soil. The real-time PCR assay was applied to 20 soil samples from soybean fields, and compared with a parasitism assay. The real-time PCR assay detected H. minnesotensis in six of the soils, whereas the parasitism assay detected H. minnesotensis in the same six soils and three additional soils. The real-time PCR assay was weakly correlated (R2 = 0.49) with the percentage of parasitized J2 in the six soils, indicating that different types of soil may interfere the efficiency of the real-time PCR assay, possibly due to the effect of soil types on efficacy of DNA extraction. The parasitism assay appeared to be more sensitive than real-time PCR in detecting presence of H. minnesotensis, but real-time PCR was much faster and less costly and provided a direct assessment of fungal biomass. Using the two assays in combination can obtain more complete information about the fungus in soil than either assay alone. Hirsutella parasitism was widespread and detected in 13 of the 20 field soils, indicating that these fungi may contribute to suppressiveness of soybean cyst nematode in nature and likely have high biological control potential for the nematode.  相似文献   

8.
《Applied soil ecology》2009,42(3):269-276
Earthworms can be used to remove polycyclic aromatic hydrocarbons (PAHs) from soil, but this might affect their survival and they might accumulate the contaminants. Sterilized and unsterilized soil was contaminated with phenanthrene (Phen), anthracene (Anth) and benzo(a)pyrene (BaP), added with or without Eisenia fetida, sewage sludge or vermicompost. Survival, growth, cocoon formation and concentrations of PAHs in the earthworms were monitored for 70 days. Addition of sewage sludge to sterilized or unsterilized soil maintained the number of earthworms and their survival was 94%. The addition of sludge significantly increased the weight of earthworms 1.3 times compared to those kept in the unamended soil or in soil amended with vermicompost. The weight of earthworms was significantly lower in sterilized than in unsterilized soil. Cocoons were only detected when sewage sludge was added to unsterilized soil. A maximum concentration of 62.3 μg Phen kg−1 was found in the earthworms kept in sterilized soil amended with vermicompost after 7 days and 22.3 μg Phen kg−1 when kept in the unamended unsterilized soil after 14 days. Concentrations of Phen in the earthworms decreased thereafter and ≤2 μg kg−1 after 28 days. A maximum Anth concentration of 82.5 μg kg−1 was found in the earthworms kept in sterilized soil amended with vermicompost and 45.8 μg Anth kg−1 when kept in the unamended unsterilized soil after 14 days. A maximum concentration of 316 μg BaP kg−1 was found in the earthworms kept in sterilized soil amended with vermicompost after 56 days and 311 μg BaP kg−1 when kept in the unsterilized soil amended with vermicompost after 28 days. The amount of BaP in the earthworm was generally largest after 28 days, but after 70 days still 60 μg kg−1 was found in E. fetida when kept in the sterilized soil amended with sewage sludge. It was found that E. fetida survived in PAHs contaminated soil and accumulated only small amounts of the contaminants, but sewage sludge was required as food for its survival and cocoon production.  相似文献   

9.
This study investigates how carbon sources of soil microbial communities vary with soil depth. Microbial phospholipid fatty acids (PLFA) were extracted from 0–20, 20–40 and 40–60 cm depth intervals from agricultural soils and analysed for their stable carbon isotopes (δ13C values). The soils had been subjected to a vegetation change from C3 (δ13C≈?29.3‰) to C4 plants (δ13C≈?12.5‰) 40 years previously, which allowed us to trace the carbon flow from plant-derived input (litter, roots, and root exudates) into microbial PLFA. While bulk soil organic matter (SOM) reflected ≈12% of the C4-derived carbon in top soil (0–20 cm) and 3% in deeper soil (40–60 cm), the PLFA had a much higher contribution of C4 carbon of about 64% in 0–20 cm and 34% in 40–60 cm. This implies a much faster turnover time of carbon in the microbial biomass compared to bulk SOM. The isotopic signature of bulk SOM and PLFA from C4 cultivated soil decreases with increasing soil depth (?23.7‰ to ?25.0‰ for bulk SOM and ?18.3‰ to ?23.3‰ for PLFA), which demonstrates decreasing influence of the isotopic signature of the new C4 vegetation with soil depth. In terms of soil microbial carbon sources this clearly shows a high percentage of C4 labelled and thus young plant carbon as microbial carbon source in topsoils. With increasing soil depth this percentage decreases and SOM is increasingly used as microbial carbon source. Among all PLFA that were associated to different microbial groups it could be observed that (a) depended on availability, Gram-negative and Gram-positive bacteria prefer plant-derived carbon as carbon source, however, (b) Gram-positive bacteria use more SOM-derived carbon sources while Gram-negative bacteria use more plant biomass. This tendency was observed in all three-depth intervals. However, our results also show that microorganisms maintain their preferred carbon sources independent on soil depth with an isotopic shift of 3–4‰ from 0–20 to 40–60 cm soil depth.  相似文献   

10.
Trifluralin is a herbicide intensively used in Turkish cotton agriculture. The recommended field dose [(RFD), 480 g active ingredient l?1], 2 × RFD, 4 × RFD and 6 × RFD of this herbicide were added to virgin (previously no trifluralin applied) and cotton field soils (previously trifluralin applied) from a district (Yumurtal?k, Adana) under Mediterranean climate conditions in order to determine their effects on soil microbial activity as measured by carbon mineralization at the different temperature conditions (20 °C, 25 °C and 30 °C). C mineralization of all samples was determined by the CO2 respiration method over 30 days (20 °C, 25 °C and 30 °C at constant moist). The ratio (%) of carbon mineralization at all doses of cotton field soil at 30 °C was significantly higher than all other field dose–temperature combinations (P < 0.001). Based on these results, trifluralin is used as a carbon source by soil microorganisms. The herbicide trifluralin was degraded completely in the cotton field but a small fraction remained in the virgin field. This result can be explained by the cotton field soil having both more active microbial populations and more microorganisms adapted to the trifluralin applications than the virgin field.  相似文献   

11.
《Applied soil ecology》2006,33(3):284-292
We examined the response of the temperature coefficient (Q10) for soil respiration to changes in soil temperature and soil moisture through a laboratory incubation experiment. Two types of soils differing in vegetation and moisture status were collected and incubated under two temperatures (10 and 30 °C) and two soil moisture regimes (35 and 75% of water holding capacity, WHC) for 5 weeks. Before and after the incubation experiment, the temperature coefficient of soil respiration was measured using soda-lime method by changing temperature in a water bath. For both soils, the mean Q10 values of the respiration rate were 2.0 in the 30 °C and 2.3 in the 10 °C soil treatments. Higher temperature with lower soil moisture treatment significantly decreased the Q10 value, whereas lower temperature with higher soil moisture treatment significantly enhanced the Q10 value (ANOVA, p < 0.05). These results indicate that soils became less sensitive to temperature when incubated under higher temperature with higher moisture conditions, and more sensitive in lower temperature with higher moisture conditions.There was a significant correlation (r2 = 0.67, p < 0.05) between water-soluble carbon (WSC) and soil respiration rate. However, the correlation between soil respiration rate and microbial biomass carbon (MBC) was weak (r2 = 0.27, p > 0.05). Although incubation temperature and moisture accounted for 40 and 29% (as r2 × 100%), respectively, of variations in Q10, soil water-soluble carbon content alone could have explained 79% of the variation, indicating that the availability of respiratory substrate, rather than the pool of soil microorganisms, played a crucial role in the response of the temperature coefficient to environmental factors. These results suggest that biotic factors should also be taken into consideration when using the Q10 function to predict the response of soil respiration to global warming.  相似文献   

12.
The herbicide sulfentrazone is classified as highly mobile and persistent and this study aimed to examine degradation of this compound on a Typic Hapludox soil that is representative of regions where sulfentrazone is used in Brazil. Soil samples were supplemented with sulfentrazone (0.7 μg active ingredient (a.i.) g?1 soil), and maintained at 27 °C. Soil moisture was corrected to 30%, 70%, or 100% water-holding capacity (WHC) and maintained constant until the end of the experimental period. Soils without added herbicide were used as controls. Aliquots were taken after 14, 30, 60, 120, 180, and 255 days of incubation for quantitative analysis of sulfentrazone residues by gas chromatography. Another experiment was conducted in soil samples, with and without the herbicide, at different temperatures (15, 30, and 40 °C), with moisture kept constant at 70% of WHC. The sulfentrazone residues were quantified by gas chromatography after 14, 30, 60, and 120 days of incubation. Sulfentrazone degradation was not affected by soil moisture. A significant effect was observed for the temperature factor after 120 days on herbicide degradation, which was higher at 30 °C. A half-life of 146.5 days was recorded. It was observed that the herbicide stimulated growth of actinomycetes, whereas bacterial and fungal growth was not affected. The microorganisms selected as potential sulfentrazone degraders were Rhizobium radiobacter, Ralstonia pickettii, Methylobacterium radiotolerans, Cladosporium sp., Eupenicillium sp., and Paecilomyces sp.  相似文献   

13.
Survival of Escherichia coli donor, recipient and transconjugant cells was studied in sterile soil incubated under a variety of conditions. In soil not amended with additional nutrients, the absence of transconjugants indicated that R-plasmid transfer had not occurred. In soil supplemented with a low level of nutrient broth, both donor and recipient cells survived over a 48 hr period. In addition, transconjugant cells were detected in soil as early as two hr after the soil was inoculated with donor and recipient strains.  相似文献   

14.
During the past couple of decades, understanding of rhizosphere biology has progressed with the discovery of a special group of microorganisms known as plant growth promoting rhizobacteria (PGPR) and its application for sustainable agriculture has increased tremendously in various parts of the world. The search for microorganisms that improve soil fertility and enhance plant nutrition has continued to attract attention due to the increasing cost of fertilizers and some of their negative environmental impacts. In this study we demonstrated, a novel bacterial species Pontibacter niistensis NII-0905 isolated from forest soil in Western ghat forest soil with potential plant growth promoting ability (PGP) such as phosphate solubilization, indole acetic acid (IAA), siderophore and hydrogen cyanide (HCN) production. The activity varies with different growth temperatures, strain solubilize 28.5 ± 0.9, 48.02 ± 1.9 and 65.07 ± 2.1 μg mL−1 at 4, 15 and 30 °C respectively and produced 24.8 μg mL−1 day−1 of indole acetic acid (IAA) in tryptophan amended media. Qualitative detection of siderophore production and HCN were also detected at all temperature tested. At a lower temperature (4 °C) strain NII-0905 retained all the plant growth promotion attributes. A significant increase in the growth of cow pea was recorded with inoculations of strain NII-0905 in pot experiments. Scanning electron microscopic study revealed the root colonization on cow pea seedlings against the untreated one. These results demonstrate that, the isolate NII-0905 has the promising PGPR attributes for both in cold as well as in humid condition. It has potential as a biofertilizer to enhance soil fertility and promote the plant growth.  相似文献   

15.
Soil-dwelling insect herbivores are significant pests in many managed ecosystems. Because eggs and larvae are difficult to observe, mathematical models have been developed to predict life-cycle events occurring in the soil. To date, these models have incorporated very little empirical information about how soil and drought conditions interact to shape these processes. This study investigated how soil temperature (10, 15, 20 and 25 °C), water content (0.02 (air dried), 0.10 and 0.25 g g?1) and pH (5, 7 and 9) interactively affected egg hatching and early larval lifespan of the clover root weevil (Sitona lepidus Gyllenhal, Coleoptera: Curculionidae). Eggs developed over 3.5 times faster at 25 °C compared with 10 °C (hatching after 40.1 and 11.5 days, respectively). The effect of drought on S. lepidus eggs was investigated by exposing eggs to drought conditions before wetting the soil (2–12 days later) at four temperatures. No eggs hatched in dry soil, suggesting that S. lepidus eggs require water to remain viable. Eggs hatched significantly sooner in slightly acidic soil (pH 5) compared with soils with higher pH values. There was also a significant interaction between soil temperature, pH and soil water content. Egg viability was significantly reduced by exposure to drought. When exposed to 2–6 days of drought, egg viability was 80–100% at all temperatures but fell to 50% after 12 days exposure at 10 °C and did not hatch at all at 20 °C and above. Drought exposure also increased hatching time of viable eggs. The effects of soil conditions on unfed larvae were less influential, except for soil temperature which significantly reduced larval longevity by 57% when reared at 25 °C compared with 10 °C (4.1 and 9.7 days, respectively). The effects of soil conditions on S. lepidus eggs and larvae are discussed in the context of global climate change and how such empirically based information could be useful for refining existing mathematical models of these processes.  相似文献   

16.
Soils in Mexico are often contaminated with hydrocarbons and addition of waste water sludge and earthworms accelerates their removal. However, little is known how contamination and subsequent bioremediation affects emissions of N2O and CO2. A laboratory study was done to investigate the effect of waste water sludge and the earthworm Eisenia fetida on emission of N2O and CO2 in a sandy loam soil contaminated with the polycyclic aromatic hydrocarbons (PAHs): phenanthrene, anthracene and benzo(a)pyrene. Emissions of N2O and CO2, and concentrations of inorganic N (ammonium (NH4+), nitrite (NO2?) nitrate (NO3?)) were monitored after 0, 5, 24, 72 and 168 h. Adding E. fetida to the PAHs contaminated soil increased CO2 production rate significantly 2.0 times independent of the addition of sludge. The N2O emission rate from unamended soil expressed on a daily base was 5 μg N kg?1 d?1 for the first 2 h and increased to a maximum of 325 μg N kg?1 d?1 after 48 h and then decreased to 10 μg N kg?1 d?1 after 168 h. Addition of PAHs, E. fetida or PAHs + E. fetida had no significant effect on the N2O emission rate. Adding sludge to the soil sharply increased the N2O emission rate to >400 μg N kg?1 d?1 for the entire incubation with a maximum of 1134 μg N kg?1 d?1 after 48 h. Addition of E. fetida, PAHs or PAHs + E. fetida to the sludge-amended soil reduced the N2O emission rate significantly compared to soil amended with sludge after 24 h. It was found that contaminating soil with PAHs and adding earthworms had no effect on emissions of N2O. Emission of N2O, however, increased in sludge-amended soil, but addition of earthworms to this soil and contamination reduced it.  相似文献   

17.
Relationships between soil pH and microbial properties in a UK arable soil   总被引：1，自引：0，他引：1  
Effects of changing pH along a natural continuous gradient of a UK silty-loam soil were investigated. The site was a 200 m soil transect of the Hoosfield acid strip (Rothamsted Research, UK) which has grown continuous barley for more than 100 years. This experiment provides a remarkably uniform soil pH gradient, ranging from about pH 8.3 to 3.7. Soil total and organic C and the ratio: (soil organic C)/(soil total N) decreased due to decreasing plant C inputs as the soil pH declined. As expected, the CaCO3 concentration was greatest at very high pH values (pH > 7.5). In contrast, extractable Al concentrations increased linearly (R2 = 0.94, p < 0.001) from below about pH 5.4, while extractable Mn concentrations were largest at pH 4.4 and decreased at lower pHs. Biomass C and biomass ninhydrin-N were greatest above pH 7. There were statistically significant relationships between soil pH and biomass C (R2 = 0.80, p < 0.001), biomass ninhydrin-N (R2 = 0.90, p < 0.001), organic C (R2 = 0.83, p < 0.001) and total N (R2 = 0.83, p < 0.001), confirming the importance of soil organic matter and pH in stimulating microbial biomass growth. Soil CO2 evolution increased as pH increased (R2 = 0.97, p < 0.001). In contrast, the respiratory quotient (qCO2) had the greatest values at either end of the pH range. This is almost certainly a response to stress caused by the low p. At the highest pH, both abiotic (from CaCO3) and biotic Co2 will be involved so the effects of high pH on biomass activity are confounded. Microbial biomass and microbial activity tended to stabilise at pH values between about 5 and 7 because the differences in organic C, total N and Al concentrations within this pH range were small. This work has established clear relationships between microbial biomass and microbial activity over an extremely wide soil pH range and within a single soil type. In contrast, most other studies have used soils of both different pH and soil type to make similar comparisons. In the latter case, the effects of soil pH on microbial properties are confounded with effects of different soil types, vegetation cover and local climatic conditions.  相似文献   

18.
A 67-day incubation experiment was carried out with a soil initially devoid of any organic matter due to heating, which was amended with sugarcane sucrose (C4-sucrose with a δ13C value of ?10.5‰), inorganic N and an inoculum for recolonisation and subsequently at day 33 with C3-cellulose (δ13C value of ?23.4‰). In this soil, all organic matter is in the microbial biomass or in freshly formed residues, which makes it possible to analyse more clearly the role of microbial residues for decomposition of N-poor substrates. The average δ13C value over the whole incubation period was ?10.7‰ in soil total C in the treatments without C3-cellulose addition. In the CO2 evolved, the δ13C values decreased from ?13.4‰ to ?15.4‰ during incubation. In the microbial biomass, the δ13C values increased from ?11.5‰ to ?10.1‰ at days 33 and 38. At day 67, 36% of the C4-sucrose was left in the treatment without a second amendment. The addition of C3-cellulose resulted in a further 7% decrease, but 4% of the C3-cellulose was lost during the second incubation period. Total microbial biomass C declined from 200 μg g?1 soil at day 5 to 70 μg g?1 soil at day 67. Fungal ergosterol increased to 1.5 μg g?1 soil at day 12 and declined more or less linearly to 0.4 μg g?1 soil at day 67. Bacterial muramic acid declined from a maximum of 35 μg g?1 soil at day 5 to a constant level of around 16 μg g?1 soil. Glucosamine showed a peak value at day 12. Galactosamine remained constant throughout the incubation. The fungal C/bacterial C ratio increased more or less linearly from 0.38 at day 5 to 1.1 at day 67 indicating a shift in the microbial community from bacteria to fungi during the incubation. The addition of C3-cellulose led to a small increase in C3-derived microbial biomass C, but to a strong increase in C4-derived microbial biomass C. At days 45 and 67, the addition of N-free C3-cellulose significantly decreased the C/N ratio of the microbial residues, suggesting that this fraction did not serve as an N-source, but as an energy source.  相似文献   

19.
《Applied soil ecology》2007,35(3):473-479
One concern in regard to the spreading of sewage sludge is the potential for contamination of soil and water by pathogens present in sludge. We studied the survival of enteric micro-organisms in sewage sludge following direct land-spreading. The sludge produced by a wastewater treatment plant (capacity equivalent to 2000 inhabitants; sludge storage tank of 700 m3) was spread on a soil, at a rate of 80 m3/ha. The tested micro-organisms included three of specific sanitary interest: faecal indicators, spores of Clostridium perfringens and enteroviruses. The results highlighted three types of behaviour associated with these three groups of micro-organisms. The enteroviruses were not detected 2 weeks after spreading on the soil whereas the concentration of faecal indicators fell slowly with an observed decrease of between 1.2 and 1.8 logarithmic units over 2 months (but without the initial level of the soil being reached). Lastly, the concentrations of C. perfringens remained stable. The different survival times of the studied micro-organisms in soil, confirm the necessity to include several indicators (bacteria and viruses) to estimate reliably the sanitary risk related to sludge spreading.  相似文献   

20.
《Applied soil ecology》2007,35(2-3):125-139
The toxic effect of chromate on soil microbial communities is not well documented, although microorganisms control biogeochemical cycling, contribute to formation of soil structure, regulate the fate of organic matter applied to soil. In this study the effects of short- and middle-term chromate on the soil microbial community were investigated. The shifts in the size and in the diversity of culturable heterotrophic bacterial community, the resistance to Cr(VI) of heterotrophic bacteria, the presence of cyanobacteria, the activity of 19 enzymes, and the ATP content were monitored over time (120 days) in soil microcosms artificially contaminated with three concentrations of chromate (50, 250 and 1000 mg kg−1 soil). The chromate contamination affected the structure and the diversity of the soil bacterial community. Bacterial strains isolated from the microcosm contaminated with the highest concentration of chromate were identified by 16S rDNA gene sequencing. All isolates belonged to the genus Pseudomonas, were able to reduce Cr(VI), and showed a high resistance to chromate. To our knowledge, this is the first report that shows Pseudomonas strains having the capability to resist up to 40 mM of Cr(VI) on minimal medium. The cyanobacterial group was more sensitive to chromate contamination than culturable heterotrophic bacteria. No cyanobacterial growth was detected in enrichment cultures from the soil polluted with the highest chromate concentration. Some enzymes were inhibited by high concentrations of chromate, whereas others were stimulated. The ATP content in microcosms was strongly affected by chromate. We conclude that the soil microbial community responds to chromate pollution through changes in community structure, in metabolic activity, and in selection for Cr(VI)-resistance.  相似文献   

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