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1.
Yearling Chinook (Oncorhynchus tshawytscha) and coho salmon (Oncorhynchus kisutch) were sampled concurrently with physical variables (temperature, salinity, depth) and biological variables (chlorophyll a concentration and copepod abundance) along the Washington and Oregon coast in June 1998–2008. Copepod species were divided into four different groups based on their water‐type affinities: cold neritic, subarctic oceanic, warm neritic, and warm oceanic. Generalized linear mixed models were used to quantify the relationship between the abundance of these four different copepod groups and the abundance of juvenile salmon. The relationships between juvenile salmon and different copepod groups were further validated using regression analysis of annual mean juvenile salmon abundance versus the mean abundance of the copepod groups. Yearling Chinook salmon abundance was negatively correlated with warm oceanic copepods, warm neritic copepods, and bottom depth, and positively correlated with cold neritic copepods, subarctic copepods, and chlorophyll a concentration. The selected habitat variables explained 67% of the variation in yearling Chinook abundance. Yearling coho salmon abundance was negatively correlated with warm oceanic copepods, warm neritic copepods, and bottom depth, and positively correlated with temperature. The selected habitat variables explained 40% of the variation in yearling coho abundance. Results suggest that copepod communities can be used to characterize spatio‐temporal patterns of abundance of juvenile salmon, i.e., large‐scale interannual variations in ocean conditions (warm versus cold years) and inshore‐offshore (cross‐shelf) gradients in the abundance of juvenile salmon can be characterized by differences in the abundance of copepod species with various water mass affinities.  相似文献   

2.
Yearling juvenile coho and Chinook salmon were sampled on 28 cruises in June and September 1981–85 and 1998–07 in continental shelf and oceanic waters off the Pacific Northwest. Oceanographic variables measured included temperature, salinity, water depth, and chlorophyll concentration (all cruises) and copepod biomass during the cruises from 1998–07. Juvenile salmonids were found almost exclusively in continental shelf waters, and showed a patchy distribution: half were collected in ~5% of the collections and none were collected in ~40% of the collections. Variance‐to‐mean ratios of the catches were high, also indicating patchy spatial distributions for both species. The salmon were most abundant in the vicinity of the Columbia River and the Washington coast in June; by September, both were less abundant, although still found mainly off Washington. In June, the geographic center‐of‐mass of the distribution for each species was located off Grays Harbor, WA, near the northern end of our sampling grid, but in September, it shifted southward and inshore. Coho salmon ranged further offshore than Chinook salmon: in June, the average median depth where they were caught was 85.6 and 55.0 m, respectively, and in September it was 65.5 and 43.7 m, respectively. Abundances of both species were significantly correlated with water depth (negatively), chlorophyll (positively) and copepod biomass (positively). Abundances of yearling Chinook salmon, but not of yearling coho salmon, were correlated with temperature (negatively). We discuss the potential role of coastal upwelling, submarine canyons and krill in determining the spatial distributions of the salmon.  相似文献   

3.
We used the average fork length of age‐3 returning coho (Oncorhynchus kisutch) and age‐3 ocean‐type and age‐4 stream‐type Chinook (Oncorhynchus tshawytscha) salmon along the northeast Pacific coast to assess the covariability between established oceanic environmental indices and growth. These indices included the Multivariate El Niño‐Southern Oscillation Index (MEI), Pacific Decadal Oscillation (PDO), Northern Oscillation Index, and Aleutian Low Pressure Index. Washington, Oregon, and California (WOC) salmon sizes were negatively correlated with the MEI values indicating that ultimate fish size was affected negatively by El Niño‐like events. Further, we show that the growth trajectory of WOC salmon was set following the first ocean winter. Returning ocean‐type British Columbia‐Puget Sound Chinook salmon average fork length was positively correlated with the MEI values during the summer and autumn of return year, which was possibly a result of a shallower mixed layer and improved food‐web productivity of subarctic Pacific waters. Size variation of coho salmon stocks south of Alaska was synchronous and negatively correlated with warm conditions (positive PDO) and weak North Pacific high pressure during ocean residence.  相似文献   

4.
5.
We examined 1454 juvenile Chinook salmon, Oncorhynchus tshawytscha (Walbaum), captured in nearshore waters off the coasts of Washington and Oregon (USA) from 1999 to 2004 for infection by Renibacterium salmoninarum, Nanophyetus salmincola Chapin and skin metacercariae. The prevalence and intensities for each of these infections were established for both yearling and subyearling Chinook salmon. Two metrics of salmon growth, weight residuals and plasma levels of insulin-like growth factor-1, were determined for salmon infected with these pathogens/parasites, both individually and in combination, with uninfected fish used for comparison. Yearling Chinook salmon infected with R. salmoninarum had significantly reduced weight residuals. Chinook salmon infected with skin metacercariae alone did not have significantly reduced growth metrics. Dual infections were not associated with significantly more severe effects on the growth metrics than single infections; the number of triple infections was very low and precluded statistical comparison. Overall, these data suggest that infections by these organisms can be associated with reduced juvenile Chinook salmon growth. Because growth in the first year at sea has been linked to survival for some stocks of Chinook salmon, the infections may therefore play a role in regulating these populations in the Northeast Pacific Ocean.  相似文献   

6.
The ocean survival of coho salmon (Oncorhynchus kisutch) off the Pacific Northwest coast has been related to oceanographic conditions regulating lower trophic level production during their first year at sea. Coastal upwelling is recognized as the primary driver of seasonal plankton production but as a single index upwelling intensity has been an inconsistent predictor of coho salmon survival. Our goal was to develop a model of upwelling‐driven meso‐zooplankton production for the Oregon shelf ecosystem that was more immediately linked to the feeding conditions experienced by juvenile salmon than a purely physical index. The model consisted of a medium‐complexity plankton model linked to a simple one‐dimensional, cross‐shelf upwelling model. The plankton model described the dynamics of nitrate, ammonium, small and large phytoplankton, meso‐zooplankton (copepods), and detritus. The model was run from 1996 to 2007 and evaluated on an interannual scale against time‐series observations of copepod biomass. The model’s ability to capture observed interannual variability improved substantially when the copepod community size distribution was taken into account each season. The meso‐zooplankton production index was significantly correlated with the ocean survival of hatchery coho salmon from the Oregon production area, although the coastal upwelling index that drove the model was not itself correlated with survival. Meso‐zooplankton production within the summer quarter (July–September) was more strongly correlated with coho survival than was meso‐zooplankton production in the spring quarter (April–June).  相似文献   

7.
To understand the interplay between habitat use and contemporary anadromous Pacific salmon, Oncorhynchus spp., distributions we explored the habitat associations of three species, pink (O. gorbuscha), chum (O. keta) and Chinook salmon (O. tshawytscha) in streams of the Wood River system of Bristol Bay, Alaska, where sockeye salmon (O. nerka) are numerically dominant. We developed models to investigate the occurrence of nondominant salmon in relation to habitat characteristics and sockeye salmon density, using four decades of salmon presence and abundance data. The frequency of occurrence and abundance of nondominant species increased with watershed drainage area and stream depth and decreased with sockeye salmon density. The range of occurrence varied from nonexistent to perennial for the other species in sockeye‐dominated streams. Increasing watershed area resulted in larger stream habitat area and deeper habitats, allowing for the sympatric occurrence and persistence of all salmon species. The relationships between habitat and the presence of these Pacific salmon help define their requirements but also remind us that the patterns of presence and absence, within the overall ranges of salmon species, have yet to be fully understood.  相似文献   

8.
Little is known about the food habits of juvenile Chinook (Oncorhynchus tshawytscha) and coho (Oncorhynchus kisutch) salmon in marine environments of Alaska, or whether their diets may have contributed to extremely high marine survival rates for coho salmon from Southeast Alaska and much more modest survival rates for Southeast Alaskan Chinook salmon. To address these issues, we documented the spatial and temporal variability of diets of both species collected from marine waters of Southeast Alaska during summers of 1997–2000. Food habits were similar: major prey items of both species included fishes, crab larvae, hyperiid amphipods, insects, and euphausiids. Multivariate analyses of diet composition indicated that the most distinct groups were formed at the smallest spatial and temporal scales (the haul), although groups also formed at larger scales, such as by month or habitat type. Our expectations for how food habits would influence survival were only partially supported. As predicted, Southeast Alaskan coho salmon had more prey in their stomachs overall [1.8% of body weight (BW)] and proportionally far fewer empty stomachs (0.7%) than either Alaskan Chinook (1.4% BW, 5.1% empty) or coho salmon from other regions. However, contrary to our expectations, coho salmon diets contained surprisingly few fish (49% by weight). Apparently, Alaskan coho salmon achieved extremely high marine survival rates despite a diet consisting largely of small, less energetically‐efficient crustacean prey. Our results suggest that diet quantity (how much is eaten) rather than diet quality (what is eaten) is important to marine survival.  相似文献   

9.
Population diversity is a mechanism for resilience and has been identified as a critical issue for fisheries management, but restoration ecologists lack evidence for specific habitat features or processes that promote phenotypic diversity. Since habitat complexity may affect population diversity, it is important to understand how population diversity is partitioned across landscapes and among populations. In this study, we examined life history diversity based on size distributions of juvenile Central Valley Chinook salmon (Oncorhynchus tshawytscha) within the Yolo Bypass, a remnant transitional habitat from floodplain to tidal sloughs in the upper San Francisco Estuary (SFE). We used a generalized least squares model with an autoregressive (AR1) correlation structure to describe the distribution of variation in fish size from 1998 to 2014, and tested the effect of two possible drivers of the observed variation: (i) environmental/seasonal drivers within the Yolo Bypass, and (ii) the juvenile Chinook source population within the Sacramento River and northern SFE. We found that the duration of floodplain inundation, water temperature variation, season, and sampling effort influenced the observed time‐specific size distribution of juvenile Chinook salmon in the Yolo Bypass. Given the lack of seasonally inundated habitat and low thermal heterogeneity in the adjacent Sacramento River, these drivers of juvenile size diversification are primarily available to salmon utilizing the Yolo Bypass. Therefore, enhancement of river floodplain‐tidal slough complexes and inundation regimes may support the resilience of imperiled Central Valley Chinook salmon.  相似文献   

10.
  1. Juvenile Pacific salmon exhibit diverse habitat use and migration strategies to navigate high environmental variability and predation risk during freshwater residency. Increasingly, urbanization and climate-driven hydrological alterations are affecting the availability and quality of aquatic habitats in salmon catchments. Thus, conservation of freshwater habitat integrity has emerged as an important challenge in supporting salmon life-history diversity as a buffer against continuing ecosystem changes.
  2. To inform catchment management for salmon, information on the distribution and movement dynamics of juvenile fish throughout the annual seasonal cycle is needed. A number of studies have assessed the ecology of juvenile coho salmon (Oncorhynchus kisutch) during summer and autumn seasons; catchment use by this species throughout the annual cycle is less well characterized, particularly in high-latitude systems.
  3. Here, n = 3,792 tagged juvenile coho salmon were tracked throughout two complete annual cycles to assess basin-wide distribution and movement behaviour of this species in a subarctic, ice-bearing catchment.
  4. Juvenile coho salmon in the Big Lake basin, Alaska, exhibited multiple habitat use and movement strategies across seasons; however, summer rearing in lotic mainstem environments followed by migration to lentic overwinter habitats was identified as a prominent behaviour, with two-thirds of tracked fish migrating en masse to concentrate in a small subset of upper catchment lakes for the winter. In contrast, the most significant tributary overwintering site (8% of tracked fish) occurred below a culvert and dam, blocking juvenile fish passage to a headwater lake, indicating that these fish may have been restricted from reaching preferred lentic overwinter habitats.
  5. These findings emphasize the importance of maintaining aquatic connectivity to lentic habitats as a conservation priority for coho salmon during freshwater residency.
  相似文献   

11.
Abstract— The predator-prey behavioral interactions between two salmon species, coho salmon ( Oncorhynchus kisutch ) and chinook salmon ( Oncorhynchus tshawytscha ), and their prey species were examined under laboratory conditions. These behaviors were studied to determine the bases for prey selection by salmon in Lake Michigan and ultimately facilitate predictions on shifts or changes in salmon diets. Chinook and coho salmon captured all prey items in the open water portion of the aquarium, and they had similar attack behaviors. Average attack swimming speeds varied from 2.6 to 3.6 m/s, and average escape swimming speeds varied from 2.6 to 2.9 m/s. There were no significant differences in attack swimming speeds and escape swimming speeds. There was a significant difference in median reactive distances between the prey captured and those that escaped. There was no reactive distance (0.00 m) for 96% and 98% of the successfully captured prey by chinook and coho salmon, respectively. Only 4% and 10% of the unsuccessful attacks by chinook and coho salmon, respectively, had no reactive distance (0.00 m). Salmon would repeatedly attack a school and capture individuals separated from the school. Alewives, bloaters and fathead minnows were easy prey because they remained in the open water portion of the aquarium and stayed in schools until only a few individuals remained. The schooling behavior of spottail shiners and emerald shiners was an effective anti-predation tactic against salmon attacks. After some experience with yellow perch, salmon were reluctant to attack them and would often break off attacks on them. When coho salmon were presented with different proportions of bloaters and yellow perch, they significantly attacked and captured bloaters in preference to yellow perch.  相似文献   

12.
  • 1. Prevailing freshwater conservation approaches in the USA stem from policy‐based ecosystem management directives, science‐based gap analyses, and legal interpretations of critical habitats. In California, there has been no systematic prioritization of freshwater habitats critical to the persistence of anadromous salmonid populations.
  • 2. Anadromous salmonids provide an optimal focal species for conservation prioritization of freshwater habitats in California owing to their flagship, umbrella and keystone status.
  • 3. The Navarro River is a key watershed for both Endangered Species Act and Clean Water Act recovery efforts in the state of California. This watershed serves as a case study in the use of iterative discriminant analysis to objectively classify freshwater habitats critical to the persistence of two species of threatened anadromous salmonids, steelhead (Oncorhynchus mykiss) and coho (Oncorhynchus kisutch).
  • 4. Riverscape parameters were used initially to define suitable habitat for focal species; subsequent refinement accounted for human disturbance within the watershed. Results from this study identify 22.1 km of riverine habitat critical to the persistence of coho salmon in the Navarro River watershed, which need active conservation or restoration; it also identified an additional 269.4 km of riverine habitat in need of protection for its aquatic habitat values.
Copyright © 2007 John Wiley & Sons, Ltd.  相似文献   

13.
Forecasting adult salmon abundance is problematic when the number of observations is small relative to the number of potential explanatory variables. Machine learning and other non‐traditional techniques employ algorithms designed to prevent model overfitting. Data from 18 coho salmon, Oncorhynchus kisutch (Walbaum), and seven Chinook salmon, Oncorhynchus tschawytscha (Walbaum), populations on the Oregon coast were used to evaluate the forecast performance of artificial neural networks, elastic net, least absolute shrinkage and selection operator, principal component regression (PCR) and ridge regression (RR) compared to several more traditional techniques. In general, the non‐traditional modelling techniques evaluated in this study performed similarly to the traditional techniques with the exception of sibling regression. This suggests that they have merit for improving actual predictions. Among the non‐traditional techniques, PCR resulted in the lowest prediction error for the coho salmon populations, and RR predicted Chinook salmon returns most accurately. The techniques explored are not an easy solution to a difficult problem. Spurious conclusions about the processes that generate salmon returns still may result as evidenced by the inclusion of an unrelated variable in many of the non‐traditional models.  相似文献   

14.
Abstract – Although homing behaviour has been observed in juvenile Atlantic salmon, brown trout and resident cutthroat trout, this behaviour has not been well studied in juvenile Pacific salmon. We examined the site fidelity and homing behaviour of juvenile coho salmon ( Oncorhynchus kisutch ) by marking and relocating them within an off-channel habitat. Over 80% of displaced fish returned to the area from which they were originally collected. The proportion of fish that returned to the original location did not vary significantly among three sampling dates. However, we found that this proportion decreased over time in a brackish lagoon when we statistically analysed the data reported by Day (1966) . Our results suggest that juvenile coho salmon exhibit strong site fidelity and are able to return to their home ranges after displacement. These behaviours are likely to be important for the winter survival of juvenile coho salmon.  相似文献   

15.
Simultaneous trawling at surface and at depth at one location off the Columbia River, Oregon, in June 2000 identified the depth distribution of juvenile salmonids and associated fishes. Juvenile salmon off the Columbia River were distributed primarily near the surface, within the upper 12 m. Highest densities of subyearling chinook salmon (Oncorhynchus tshawytscha) off the Columbia River were associated with high surface currents and decreasing tidal levels, with time of day possibly a co‐factor. Densities of yearling chinook salmon increased with higher turbidity. Pacific herring (Clupea pallasi) was the most abundant and commonly caught forage fish, with density increasing at night, probably related to diel vertical migration. Catches of juvenile salmonids were not associated with catches of forage fishes. Daytime surface trawling appears to be an appropriate method for assessing the distribution and abundance of juvenile salmonids in marine habitats.  相似文献   

16.
Chinook salmon (Oncorhynchus tshawytscha) is one of several economically‐important species of salmon found in the Northeast Pacific Ocean. The first months at sea are believed to be the most critical for salmon survival, with the highest rate of mortality occurring during this period. In the present study, we examined interannual diet composition and body condition trends for late‐summer subyearling Chinook salmon caught off Oregon and Washington from 1998 to 2012. Interannual variability was observed in juvenile salmon diet composition by weight of prey consumed. Juvenile subyearling Chinook salmon were mainly piscivorous, with northern anchovy (Engraulis mordax) being especially important, making up half the diet by weight in some years. Annual diets clustered into two groups, primarily defined by their proportion of invertebrate prey (14% versus 39% on average). Diet composition was found to influence adult returns, with salmon from high‐invertebrate years returning in significantly larger numbers 2–3 yrs later. However, years that had high adult returns had overall lower stomach fullness and poorer body condition as juveniles, a counterintuitive result potentially driven by the enhanced survival of less fit individuals in better ocean conditions (top‐down effect). Ocean conditions in years with a higher percentage of invertebrates in salmon diets were significantly cooler from May to August, and bottom‐up processes may have led to a fall plankton community with a larger proportion of invertebrates. Our results suggest that the plankton community assemblage during this first fall may be critical in predicting adult returns of Chinook salmon in the Pacific Northwest.  相似文献   

17.
Abstract Chinook salmon, Oncorhynchus tshawytscha (Walbaum), populations have declined rapidly along the western coast of North America since the year 2000, possibly because of factors such as habitat loss, altered hydrology and barriers to migration. However, few analyses have rigorously examined which of these factors actually explain historical patterns of extirpation. Data were compiled on flow regimes, habitat loss and migration barriers for 27 streams that historically supported autumn run salmon and 22 streams that supported spring runs. The probability of extirpation in streams supporting autumn run was predicted solely by migration barriers. All other factors were >105 times less likely to explain existing variation. By contrast, models for spring run salmon suggest that habitat loss and altered flow regimes were also predictors of extirpation. These results suggest that regional extirpation of Chinook salmon has been driven by multiple forms of environmental change, and restoration efforts must address a multitude of bottlenecks that now impact spring and autumn run populations.  相似文献   

18.
Abstract Many habitat enhancement techniques aimed at restoring salmonid populations have not been comprehensively assessed. The growth and diet of juvenile Chinook salmon, Oncorhynchus tshawytscha (Walbaum), rearing in a reach designed to enhance spawning were evaluated to determine how a non‐target life stage fared in the engineered habitat. Prior work demonstrated differences in food web structure between restored and unenhanced reaches of the Merced River, thus juvenile salmon feeding dynamics were also hypothesised to vary. Dependent variables were compared among fish collected from within and near the upper boundary of the restored reach and in an unenhanced habitat upstream. Diets, otolith‐derived growth and stable isotope‐inferred trophic positions were compared. Baetidae mayflies were particularly important prey in the restored reach, while elsewhere individuals exhibited heterogeneous diets. Salmon residing at the bottom of the restored reach exhibited slightly faster growth rates relative to fish collected elsewhere, although stable isotope and diet analyses suggested that they fed at a relatively low trophic position. Specialised Baetis predation and/or abundant interstitial refugia potentially improved rearing conditions in the restored reach. Data suggest that gravel enhancement and channel realignment designed to augment adult spawning habitat may simultaneously support juvenile Chinook salmon despite low invertebrate food resources.  相似文献   

19.
Fisheries bycatch impacts marine species globally and understanding the underlying ecological and behavioural mechanisms could improve bycatch mitigation and forecasts in novel conditions. Oceans are rapidly warming causing shifts in marine species distributions with unknown, but likely, bycatch consequences. We examined whether thermal and diel depth-use behaviours influenced bycatch of a keystone species (Chinook salmon; Oncorhynchus tshawytscha, Salmonidae) in the largest fishery on the US West Coast (Pacific hake; Merluccius productus, Merlucciidae) with annual consequences in a warming ocean. We used Generalized Additive Models with 20 years of data including 54,509 hauls from the at-sea hake fishery spanning Oregon and Washington coasts including genetic information for five salmon populations. Our results demonstrate that Chinook salmon bycatch rates increased in warm ocean years explained by salmon depth-use behaviours. Chinook salmon typically occupy shallower water column depths compared to hake. However, salmon moved deeper when sea surface temperatures (SSTs) were warm and at night, which increased overlap with hake and exacerbated bycatch rates. We show that night fishing reductions (a voluntary bycatch mitigation strategy) are effective in reducing salmon bycatch in cool SSTs by limiting fishing effort when diel vertical movements bring salmon deeper but becomes less effective in warm SSTs as salmon seek deeper thermal refugia during the day. Thermal and diel behaviours were more pronounced in southern compared with northern salmon populations. We provide mechanistic support that climate change may intensify Chinook salmon bycatch in the hake fishery and demonstrate how an inferential approach can inform bycatch management in a changing world.  相似文献   

20.
Abstract – Population genetic structure was detected in Chinook salmon Oncorhynchus tshawytscha in their non‐native range of Lake Huron using microsatellite DNA. All Chinook salmon in this system descend from Green River, Washington cohorts, originally transplanted to Michigan hatcheries in the late 1960s. We tested for population genetic differentiation of age 0 fish collected from 13 rivers and two hatcheries in 2007. The amount of genetic differentiation among collection sites was low but statistically significant, with FST values ranging from 0.036 to 0.133 and RST values ranging from 0.008 to 0.157 for specific loci. Based on pairwise FST and RST values and Bayesian cluster analysis, the Maitland River population in the Main Basin of Lake Huron was genetically distinct from the remaining collection sites. Based on analysis of bycatch data from commercial gill net fisheries, Chinook salmon likely colonised the Main Basin by 1975 (10 generations ago) and the North Channel and southern Georgian Bay regions by 1980 (eight generations ago). Thus, population genetic structure has emerged in Lake Huron Chinook salmon in <10 generations.  相似文献   

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