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1.
A. Fox A. R. Fowkes A. Skelton V. Harju A. Buxton-Kirk M. Kelly S. M. D. Forde H. Pufal C. Conyers R. Ward R. Weekes N. Boonham I. P. Adams 《Plant pathology》2019,68(3):576-587
Ullucus tuberosus (ulluco) is a tuber-forming species that has become a novel crop in highland and temperate maritime climates. Eight viruses have been previously reported infecting Ullucus, including Andean potato latent virus (APLV), a quarantine virus within the European Union. No reference sequences have been published for the viruses previously described from U. tuberosus. Plants grown in the UK for the internet trade were tested for the presence of quarantine viruses using ELISA and real-time RT-PCR. ELISA positive results were obtained for APLV and multiple other viruses. A similar suite of viruses was detected at a second outbreak site linked to horticultural trade. Virus identification was by high-throughput sequencing (HTS) using a ribosomal RNA (rRNA)-depleted total RNA approach. Analysis of viral contigs indicated the presence of several novel viruses closely related to, but not consistent with, the viruses indicated by ELISA. Further confirmatory testing by real-time RT-PCR indicated that two tymoviruses, tentatively named Ullucus tymovirus 1 and Ullucus tymovirus 2, were more closely related to each other (85% identity), than to APLV or Andean potato mild mosaic virus (63–66% identity). APLV could not be confirmed from either site by either HTS or PCR. A novel tobamovirus (Ullucus tobamovirus 1) was only detected at the initial outbreak site. A novel polerovirus (Ullucus polerovirus 1) and a distinct genotype of Papaya mosaic virus were detected from both outbreak sites. Deploying HTS during a plant health outbreak demonstrates the potential of this approach to give rapid, accurate diagnosis. 相似文献
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Detection of a broad range of potato viruses in a single assay by mechanical inoculation of herbaceous test plants 总被引：1，自引：0，他引：1
To optimize mechanical inoculation of test plants as part of the regulated post-entry quarantine testing of stolon- and tuber-forming Solanum spp. (including potato), nine test plant species have been screened for their ability to detect 22 potato-infecting viruses. These included all the common mechanically transmissible potato viruses and most of the viruses found in potato incidentally. The symptoms observed after mechanical inoculation are shown for each combination of test plant species and virus. Under given conditions, Nicotiana occidentalis -P1 and Nicotiana hesperis -67A were found to detect reliably 20 and 18 out of 22 viruses respectively. These and former results on the seed-transmissible viruses and Andean potato mottle virus demonstrate that these Nicotiana species are very suitable for post-entry quarantine testing. Addition of either Chenopodium amaranticolor or Chenopodium quinoa to these two species may slightly extend the range of viruses. Therefore, using C. amaranticolor / C. quinoa , N. hesperis -67A and N. occidentalis -P1 for the biological screening of imported Solanum spp. will improve both the efficiency and the quality of post-entry quarantine testing. 相似文献
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A potyvirus was isolated from Datura stramonium, Lycopersicon esculentum (tomato) and Solanum nigrum in the Yemen. It was transmitted mechanically and by Myzus persicae in a non-persistent manner. Its flexuous rod-shaped particles had a mean length of 719 nm and some of its pinwheel inclusion bodies in infected Nicotiana clevelandii leaves were unusual in that they were dichotomously branched. The virus infected various solanaceous species, but the symptoms it induced were distinct from those of pepper veinal mottle (PVMV) and potato Y viruses. Its particles were purified from N. glutinosa and their coat protein had an atypically high molecular mass a potyvirus of 41·5 kDa. They showed a distant serological relationship to those of PVMV and potato virus V in ISEM decoration tests, but did not react with antisera to particles of any other potyvirus tested. The virus has been tentatively named tomato mild mottle virus. 相似文献
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Bernal JJ Jiménez I Moreno M Hord M Rivera C Koenig R Rodríguez-Cerezo E 《Phytopathology》2000,90(10):1098-1104
ABSTRACT Chayote mosaic virus (ChMV) is a putative tymovirus isolated from chayote crops in Costa Rica. ChMV was characterized at the host range, serological, and molecular levels. ChMV was transmitted mechanically and induced disease symptoms mainly in Cucurbitaceae hosts. Asymptomatic infections were detected in other host families. Serologically, ChMV is related to the Andean potato latent virus (APLV) and the Eggplant mosaic virus (EMV), both members of the genus Tymovirus infecting solanaceous hosts in the Caribbean Basin and South America. The sequence of the genomic RNA of ChMV was determined and its genetic organization was typical of tymoviruses. Comparisons with other tymoviral sequences showed that ChMV was a new member of the genus Tymovirus. The phylogenetic analyses of the coat protein gene were consistent with serological comparisons and positioned ChMV within a cluster of tymoviruses infecting mainly cucurbit or solanaceous hosts, including APLV and EMV. Phylogenetic analyses of the replicase protein gene confirmed the close relationship of ChMV and EMV. Our results suggest that ChMV is related to two tymoviruses (APLV and EMV) of proximal geographical provenance but with different natural host ranges. ChMV is the first cucurbit-infecting tymovirus to be fully characterized at the genomic level. 相似文献
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A survey of Potato virus Y (PVY) was carried out on weeds growing in and around potato fields in Syria during the autumn growing seasons of 2002, 2004 and 2006. A total of 59 samples of eight weed species and three tobacco ( Nicotiana tabacum ) samples were tested by ELISA using PVY antisera. Among them 15 samples belonged to Solanum nigrum (7 samples), Physalis sp. (6 samples) and tobacco (2 samples) were PVY infected. This suggests that weed hosts and neighbouring tobacco fields are natural reservoirs of PVY in Syria. According to their biological, serological and molecular characteristics, the majority of weed PVY isolates belonged to the PVYSYR variant indicating a possible correlation between the high incidence of PVYSYR in potato and weed hosts. This is the first report on the occurrence and characterization of weed PVY isolates from Syria. 相似文献
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Three distinct viruses, named chloris striate mosaic virus (CSMV), paspalum striate mosaic virus (PaSMV) and digitaria didactyla striate mosaic virus (DDSMV), have been identified among the five Gramineae-infecting geminiviruses from Australia using polyclonal antisera. An isolate from Microlaena was confirmed as a strain of CSMV, and an isolate from Bromus catharticus was identified as PaSMV-BC. Enzyme-linked immunosorbent assay (ELISA) detected relationships between all but one of the viruses tested, the exception being miscanthus streak virus (MiSV) from Japan. The Australian viruses proved to be distantly related to similar viruses from Africa, digitaria streak virus (DSV) from Vanuatu, and wheat dwarf virus (WDV) from Europe. Three distinct groups of viruses from Africa, Australia and Europe were distinguished by phylogenetic analysis. 相似文献
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Characterization of a strain of Apple stem grooving virus in Actinidia chinensis from China 总被引：4，自引：0，他引：4
G. R. G. Clover †‡ M. N. Pearson D. R. Elliott Z. Tang T. E. Smales B. J. R. Alexander 《Plant pathology》2003,52(3):371-378
A new strain of Apple stem grooving virus (ASGV) has been identified in Actinidia chinensis imported from China. The leaves of these plants exhibited a variety of symptoms including interveinal mottling, chlorotic mosaics and ringspots. Capillovirus-like particles were observed under the electron microscope, and the virus could be mechanically transmitted to a range of herbaceous indicators. The virus was detected using ELISA with antisera raised against ASGV. Sequencing of the virus revealed that it had more than 95% amino acid identity with ASGV in the putative coat and movement proteins. From the morphological, transmission, serological and molecular evidence, it was concluded that the virus is a strain of ASGV. It is not known how this strain of ASGV is transmitted, other than by grafting, nor is it known what effect the virus has on the growth of infected vines. The Actinidia -infecting strain of ASGV does not occur in New Zealand, and infected plants will not be released from quarantine. The detection methods used during the research will assist quarantine and the safe movement of breeding material. 相似文献
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Serological relationships between five fungally transmitted cereal viruses and other elongated viruses 总被引：2，自引：0，他引：2
F(ab')2 and protein A ELISA tests were used to investigate the serological affinities of five fungally transmitted cereal viruses: barley yellow mosaic (BaYMV), barley mild mosaic (BaMMV), oat mosaic (OMV), wheat yellow mosaic (WYMV) and oat golden stripe (OGSV). Within this group only BaYMV and WYMV were related. Chinese and UK isolates of BaYMV appeared to be similar. In tests using antisera to 29 other elongated viruses, BaYMV was related to one isolate of bean yellow mosaic poty virus (BYMV-G) and OGSV had affinities with BYMV-G, potato virus M, red clover vein mosaic (both carlaviruses) and perhaps Hordeum mosaic virus. The results were confirmed in immunoelectron microscopic tests. No affinities were found for BaMMV, OMV or WYMV. 相似文献
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G. Garry G. A. Forbes † A. Salas M. Santa Cruz W. G. Perez R. J. Nelson 《Plant pathology》2005,54(6):740-748
To test the hypothesis that isolates of Phytophthora infestans attacking wild Solanaceae exhibit specialization for particular host species, 115 isolates of P. infestans were collected from cultivated potatoes, nontuber-bearing Solanum spp. of the Basarthrum section and wild tomatoes from five departments in the northern and central highlands of Peru, and characterized using several neutral markers. All isolates belonged to one of four clonal lineages described previously in Peru: EC-1, US-1, PE-3 and PE-7. There was a strong association of three lineages with host species: PE-3 was only isolated from cultivated potato, while PE-7 and US-1 were only isolated from nontuber-bearing Solanum spp. ( Basarthrum section and wild tomatoes). EC-1 was isolated from all host groups sampled. A subset ( n = 74) of the isolates was evaluated for metalaxyl resistance. High levels of resistance were found almost exclusively in EC-1 and PE-3, while US-1 and PE-7 isolates were generally sensitive. In a detached-leaf assay for lesion diameter using five EC-1 isolates from S. caripense and seven EC-1 isolates from cultivated potato, there was a significant interaction between isolate origin and inoculated host, caused by higher aggressiveness of EC-1 from cultivated potato on its host of origin. In a comparison of EC-1 (seven isolates from cultivated potato) and US-1 (three isolates from S. caripense ), each pathogen lineage was more aggressive on its original host species, causing a highly significant interaction between isolate origin and inoculated host. Wild tomatoes and nontuber-bearing Solanum spp. harbour several pathogen lineages in Peru and could serve as reservoirs of inoculum that might contribute to epidemics on potato or tomato. Potential risks associated with the use of wild Solanum hosts as sources of resistance to P. infestans are discussed . 相似文献
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S. Marco 《Phytoparasitica》1985,13(3-4):201-207
The detection of potato leafroll virus (PLRV) and beet western yellows virus (BWYV) and their serological relatedness were investigated by the double sandwich ELISA (DS). In both pure preparations and crude plant extracts, an unequivocal detection of each of these viruses was obtained by DS, provided the homologous antisera were used. No detection was achieved when the heterologous antisera were used, although purified virus could be detected when using the heterologous antisera for coating, providing the homologous antisera were used as conjugates. Therefore, for routine screening of BWYV or PLRV infection in plants, the DS method with homologous antisera can be used. However, it does not seem that BWYV infection in potato could be detected by the routine DS aimed for PLRV screening. In immunosorbent electron microscopy, PLRV and BWYV could be easily detected by coating grids with either homologous or heterologous antiserum. This and the possibility of trapping each virus in ELISA plates with the heterologous antiserum indicate serological cross-reactivity between PLRV and BWYV. 相似文献
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Paul van Dijk René A. A. van der Vlugt 《European journal of plant pathology / European Foundation for Plant Pathology》1994,100(3-4):269-277
Flexuous viruses were transmitted from rakkyo (Allium chinense) and wild leek species (especiallyA. commutatum) to plants of crow garlic (A. vineale), by transfer of dry bulb mites. By electron microscope decoration tests using three antisera and by inoculations onto test plants, it was concluded that from each of the two natural host species at least two viruses were isolated. The viruses from wild leeks are both pathogenic onAllium spp. and may be of economic importance. Decoration tests on a virus mixture from shallot obtained earlier, revealed another new mite-borne virus in this species. The mite-borne viruses ofAllium spp. appear to be very common; they are largely diverse and their identification remains difficult. 相似文献
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D. Peters A. F. L. M. Derks 《European journal of plant pathology / European Foundation for Plant Pathology》1974,80(4):124-132
An apparently undescribed virus was isolated fromPhysalis subglabrata in Illinois, USA, and its properties were studied. The virus was namedPhysalis mosaic virus (PMV). It was readily transmitted by sap inoculation to 23 out of 34 Solanaceae tested, toChenopodium foetidum andSonchus oleraceus but not to 28 other non-solanaceous species inoculated. Purified preparations of PMV contained isometric particles of 27 nm in diameter, which sedimented as two components with sedimentation coefficients of 50 and 112 S. The 112 S component was infectious, the 52 S component was not. The virus contained 38% ribonucleic acid with a molar base content of G 14.4%, A 22.9%, C 37,2% and U 25.5%.Purified preparations were highly infectious; a concentration of about 6000 particles per ml was infectious on plants.PMV is a member of the Andean potato latent virus subgroup of the turnip yellow mosaic virus group. The virus was closely related to the viruses: Andean potato latent, belladonna mottle, dulcamara mottle and egg-plant mosaic.Samenvatting Een nog niet eerder beschreven virus, dat in de staat Illinois (V.S. van Amerika) opPhysalis subglabrata was gevonden, werd in Wageningen bestudeerd. Het virus dat Physalis mosaic virus (PMV) (in het Nederlands:Physalis-mozaïekvirus) werd genoemd, kon met sap worden overgebracht.BehalveChenopodium foetidum enSonchus oleraceus bleken ook 23 van de 34 getoetste soorten uit de familie Solanaceae vatbaar voor dit virus te zijn. Gezuiverde virus preparaten bevatten isometrische deeltjes met een diameter van 27 nm (Fig. 2) Het virus bestaat uit twee deeltjes met sedimentatie-coëfficiënten van 112 en 50 S. Het 112 S deeltje bleek infectieus te zijn, het andere niet. Op grond van de sedimentatiecoëfficiënten kan worden berekend dat het 112 S deeltje 38% nucleïnezuur bevat. Voor de basenverhouding in het nucleïnezuur werd 22,9% adenine, 14,4% guanine, 37,2% cytosine en 25,5% uracil gevonden (Tabel 1). Het hoge gehalte van cytosine kwam ook tot uiting in de U.V. absorptiekromme van het virus en het nucleïnezuur (Fig. 1). Het gezuiverde virus bleek zeer infectieus te zijn; 6000 deeltjes/ml waren in staat een plant van de soortNicotiana clevelandii ziek te maken.Op grond van serologisch onderzoek kon het virus tot de turnip yellow mosaic virus groep worden gerekend. Het vertoonde serologische verwantschap met de Andean potato latent virus (APLV) subgroep (Tabel 2). In premunitieproeven bood het slechts een geringe bescherming tegen APLV en dulcamara mottle virus. Het omgekeerde werd eveneens geconstateerd. De leden van de APLV-subgroep kunnen op grond van hun waardplantenreeks van elkaar onderscheiden worden (Tabel 3). 相似文献
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C. Brattey J. L. Badge R. Burns G. D. Foster E. George H. A. Goodfellow V. Mulholland J. G. McDonald C. J. Jeffries †‡ 《Plant pathology》2002,51(4):495-505
A previously undescribed carlavirus, potato latent virus (PotLV), was found infecting the potato cultivar Red La Soda imported from the USA. The particles were filamentous and slightly curved, with modal lengths of 530 and 670 nm. The 11 kDa protein encoded downstream from the coat protein contained a 'zinc-finger' motif characteristic of carlaviruses, and RT–PCR using a carlavirus-specific primer gave a PCR product of 857 bp. Antibodies produced to PotLV did not detect other carlaviruses when used in ELISA and the coat-protein nucleic acid sequence of PotLV showed < 67% similarity with the other carlaviruses tested. The closest similarity was with the Andean strain of potato virus S. Unusually for a carlavirus, PotLV systemically infected Nicotiana bigelovii , N. glutinosa , N. rustica , N. tabacum and Physalis floridana . 相似文献
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中国甘薯病毒的血清学检测 总被引：21，自引：2，他引：21
作者用4种甘薯病毒抗体(IgG),3种血清学方法(DAS-ELISA、Dot-blot-ELISA和ISEM)对北京,江苏、四川、山东四省(市)的253份甘薯病毒病样品进行了检测。结果表明:上述地区甘薯中普遍存在甘薯羽状斑驳病毒(SPFMV)和甘薯潜隐病毒(SPLV),尚难确定是否存在甘薯轻斑驳病毒(SPMMV)和甘薯花叶菜花叶状病毒(Sweet Potato Caulimo-like Virus,SPCLV)。21%的显症样品同上述4种病毒的抗血清不产生反应,显示我国甘薯上尚存在其它病毒。用Dot blot-ELISA和ISEM检测甘薯病毒比用DAS-ELISA灵敏准确。 相似文献
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在吉林省7个主要甘薯种植区共采集85份甘薯叶片样品,利用小RNA深度测序技术对混合样品进行检测,经RT-PCR和测序验证,鉴定出样品中存在10种病毒,包括6种RNA病毒和4种DNA病毒。分别是马铃薯Y病毒科马铃薯Y病毒属的甘薯羽状斑驳病毒Sweet potato feathery mottle virus (SPFMV)、甘薯潜隐病毒Sweet potato latent virus (SPLV)、甘薯G病毒Sweet potato virus G (SPVG)、甘薯C病毒Sweet potato virus C (SPVC)、甘薯2号病毒Sweet potato virus 2 (SPV2);长线形病毒科毛形病毒属的甘薯褪绿矮化病毒Sweet potato chlorotic stunt virus (SPCSV);双生病毒科菜豆金色花叶病毒属的甘薯曲叶病毒Sweet potato leaf curl virus(SPLCV);玉米线条病毒属的甘薯无症状1号病毒Sweet potato symptomless virus 1 (SPSMV1);花椰菜花叶病毒科杆状DNA病毒属的甘薯杆状DNA病毒B Sweet potato badnavirus B (SPBV-B)和甘薯隐症病毒Sweet potato pakakuy virus (SPPV)。 相似文献