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1.
多种环境下大豆单株粒重QTL的定位与互作分析   总被引:1,自引:0,他引:1  
定位大豆单株粒重QTL、分析QTL间的上位效应及QTL与环境互作效应, 有利于大豆单株粒重遗传机理的深入研究。利用147个F2:14~F2:18 RIL群体, 5年2点多环境下以CIM和MIM方法同时定位大豆单株粒重QTL, 检测到17个控制单株粒重的QTL, 分别位于D1a、B1、B2、C2、F、G和A1连锁群上, 贡献率为6.0%~47.9%;用2种方法同时检测到3个QTL, 即qSWPP-DIa-3、qSWPP-F-1和qSWPP-D1a-5, 贡献率为6.3%~38.3%;2年以上同时检测到4个QTL, 即qSWPP-DIa-1、qSWPP-DIa-2、qSWPP-B1-1和qSWPP-G-1, 贡献率为8.1%~47.9%;利用QTLMapper分析QE互作效应和QTL间上位效应, 7种环境下的数据联合分析得到1个QE互作QTL和4对上位效应QTL, 贡献率和加性效应都较小。在分子标记辅助育种中应该同时考虑主效QTL及各微效QTL之间的互作。  相似文献   

2.
选用感丝裂病的玉米自交系R08与抗丝裂病的自交系Es40组配F2群体共348个单株,构建了包含115个SSR标记的分子遗传连锁图谱,覆盖玉米基因组2 178.6 cM,平均图距为18.9 cM。采用复合区间作图法,对F2:4家系丝裂病数据进行抗性QTL分析,共检测到12个QTL,分别位于第1、2、4、5和7染色体,贡献率为4.22%~37.95%。其中在第1、3染色体上检测到主效QTL,贡献率均大于30%,基因作用方式均为显性,其余10个QTL的作用方式多为加性或部分显性。  相似文献   

3.
水稻穗顶部退化突变体L-05261的遗传分析   总被引:2,自引:0,他引:2  
稻穗顶部小穗退化降低单株产量,严重影响水稻单产。对穗顶部明显退化材料L-05261的研究表明,小穗退化可能与稻穗内部过氧化氢的积累有关。2个非穗顶部退化品种和2个轻微穗顶部退化品种与L-05261杂交所得F1植株稻穗顶部都呈现穗退化表型,F2群体的小穗退化率均呈连续分布,但表型偏向非穗退化亲本。在组合L-05261×IRAT129 F2群体中,顶部小穗退化与非退化单株的比例适合63︰1;同一组合的BC1F1回交群体中,顶部小穗退化与非退化植株比例接近7︰1。表明穗顶部小穗退化表型受3对或3对以上显性或部分显性基因控制。利用上述群体中的182个单株,在第3、第4、第5、第8染色体上分别检测到qPAA3、qPAA4、qPAA5和qPAA8 4个QTL,它们之间不存在互作,合计可解释46.32%的表型变异,其余的表型变异可能是由环境条件的变化造成的。  相似文献   

4.
以东乡普通野生稻和日本晴为亲本构建的染色体片段置换系为研究材料,2019年分别在北京、山东临沂和江西南昌对分蘖数、穗粒数和粒形等11个产量相关性状进行多环境鉴定,结合染色体片段置换系基因型数据定位水稻产量相关性状QTL。3个环境共检测到68个QTL,包括株高4个、穗长5个、分蘖数2个、一次枝梗数7个、一次枝梗粒数8个、二次枝梗数8个、二次枝梗粒数10个、每穗粒数6个、千粒重7个、粒长8个和粒宽3个;LOD值介于2.50~12.66之间,贡献率变幅为4.67%~27.79%,15个QTL的贡献率大于15%;24个QTL与已报道位点/基因位置重叠,44个QTL为新发现位点;6个QTL在2个环境能被检测到,1个QTL qTGW2能在3个环境检测到,且是还未报道的新位点。最后,利用BSA法验证了qPH7、qPBPP8-2和qGW10三个QTL的可靠性。本研究将为后续产量相关性状基因克隆以及进一步解析其遗传基础和分子调控机制奠定基础。  相似文献   

5.
利用Bayes分层广义线性模型剖析大豆籽粒性状的遗传基础   总被引:1,自引:0,他引:1  
以溧水中子黄豆(P1)和南农493-1(P2)组合的504个正反交F2:3~F2:7家系群体为材料, 调查大豆粒长、粒宽、粒厚、长宽比、长厚比、宽厚比和百粒重性状在2007—2011年的表型观测值, 扫描F2群体SSR分子标记信息, 用Bayes分层广义线性模型方法检测了上述性状的主效QTL、QTL´环境(QE)互作、QTL´细胞质(QC)互作和QTL´QTL(QQ)互作。共检测到89个主效QTL、33对QE、20对QC和35对QQ互作。上述7个性状的主效QTL分别有7、10、10、19、19、17和7个; QQ互作分别有1、10、6、0、6、9和3对, 没有检测到显性´显性互作; QE互作分别有5、7、6、3、6、2和4对; QC互作分别有2、1、3、8、4、2和0对。主效、QQ互作、QC互作和QE互作QTL的总贡献率分别为12.42%~61.79%、0~23.21%、0.35%~1.51%和0~14.16%, 表明主效QTL贡献最大, QQ互作次之, QE互作最小。各类QTL都有一因多效现象, 同一基因座可通过不同方式影响性状表达。这些结果揭示了大豆粒形性状的遗传基础, 为标记辅助育种提供了参考信息。  相似文献   

6.
以普通小麦品种川农16与人工合成小麦衍生品种川麦42为亲本构建了含有127个株系的重组自交系(RIL)群体,将2008和2009年收获的种子用玉米象(Sitophilus zeamais)虫卵进行接种,并于2009年11月开始储藏,次年8月和10月进行虫害调查。利用复合区间作图法(CIM)对RIL群体的抗虫性进行QTL定位分析。利用2008年收获群体检测到位于3B、2D和3D染色体的3个QTL,贡献率依次为10.2%、8.5%和8.3%;利用2009年收获群体检测到位于3D和4B的2个QTL,贡献率分别为8.5%和11.3%。位于3D染色体Xbarc6–Xgwm112标记区间内的QTL在年度间重复检测到,贡献率为8.3%~8.5%,抗性位点来自川农16。  相似文献   

7.
为了深入挖掘和利用棉属野生种克劳茨基棉(Gossypium klotzschianum)的优异等位基因,构建了一个(陆地棉泗棉2号×克劳茨基棉)×泗棉2号的BC1F2群体,对纤维品质性状初步定位,单标记相关分析表明位于第7染色体上的SSR标记NAU1362与马克隆值表现极显著相关。进一步选择在第7染色体上含有克劳茨基棉渐渗片段的BC1F2单株与轮回亲本泗棉2号回交,构建BC2F3和BC2F4分离群体,通过两年的田间重复试验验证该QTL的位置与效应。结果表明,该QTL (qFMIC-7-1)在BC2F3、BC2F4世代均被检测到,位于相同的标记区间,分别可以解释9.0%、8.8%的表型变异,增效基因来源于野生种克劳茨基棉,与BC1F2群体定位结果基本一致。同时在第7染色体上检测到另一马克隆值QTL (qFMIC-7-2),同样在BC2F3、BC2F4两个世代均能够被检测到,分别可以解释3.7%、4.7%的表型变异,但增效基因均来源于泗棉2号。  相似文献   

8.
无芥酸甘蓝型油菜十八碳不饱和脂肪酸含量的QTL定位   总被引:4,自引:1,他引:3  
用无芥酸的高油酸油菜品系HOP和低油酸油菜品种湘油15为父母本构建含189单株的F2代作图群体。F2代单粒种子播种前采用半粒取样,F2代单株种子采用混合取样,进行脂肪酸含量的气相色谱分析。统计检测显示这两种方法测定结果极显著相关,各种脂肪酸含量之间大部分也呈显著相关。用该群体构建含342个SSR标记的遗传连锁图并对18碳不饱和脂肪酸含量进行了QTL定位。在A5和C5连锁群上各检测到1个油酸含量主效QTL,其中位于A5连锁群的QTL效应值较大,且与FAD2基因紧密连锁;位于C5连锁群的QTL为首次报道,与之紧密连锁的标记在A5 连锁群QTL区域有同源标记,说明可能与位于C5的FAD2基因有关。用两种方法测定性状值都能检测到这2个QTL,且效应值比较接近,共能解释60%~70%油酸含量变异。由于油酸含量与亚油酸之间高度相关,定位在A5和C5的油酸含量QTL也被确认为亚油酸含量主效QTL,但利用单株法测定的性状值能在A4连锁群上再发现1个LOD值较低的亚油酸含量QTL。两种测定法能比较一致地在A4、A5和C4连锁群上检测到3个亚麻酸含量主效QTL,共能解释72%~80%亚麻酸含量变异。用半粒法能在A4连锁群还能检测到1个解释变异度为12.42%的较小LOD值的亚麻酸含量QTL。  相似文献   

9.
不同水分胁迫下小麦胚芽鞘和胚根长度的QTL分析   总被引:2,自引:0,他引:2  
小麦胚芽鞘和胚根在不同渗透溶液下的长度变化是鉴评小麦幼苗抗逆性的重要指标。以小麦花培3号×豫麦57的DH株系衍生的含168个组合的永久F2 (immortalized F2, IF2)群体为材料,在蒸馏水(正常条件)以及10%、20%和30%聚乙二醇(PEG-6000)模拟水分胁迫处理下,进行胚芽鞘长和胚根长度的数量性状基因(QTL)定位分析。利用完备区间作图法,共检测到影响胚芽鞘和胚根长度的23个QTL,单个QTL对表型的贡献率为4.93%~35.37%。位于4B染色体区间Xcfd39.2–Xcfd22.2上影响胚芽鞘长度的位点QCl4B,具有最大的遗传效应,贡献率为35.37%;在3D染色体Xcfd223–Xbarc323区段,正常条件和20% PEG-6000处理下同时检测到影响胚芽鞘长度的QTL,QCl3D-a,其贡献率分别为7.83%和11.74%。另外,在10% PEG-6000处理下,3D染色体上的相近区域还定位出了影响胚芽鞘长度的QCl3D-b位点;在染色体1A和染色体5A1上各检测出与胚根长度有关的2个和3个不同的QTL;在6D染色体Xswes679.1–Xcfa2129和Xwmc412.1–Xcfd49区间分别检测到2个影响胚芽鞘长度和胚根长度的QTL。这些主效QTL可用于胚芽鞘和根系的分子标记辅助选择。  相似文献   

10.
菌核病是一类非专一性的植物真菌病原菌,寄主范围广泛,严重危害农作物的生产。对高世代重组自交系群体(RIL)及F2群体终花期茎秆进行菌核病抗性接种鉴定,根据构建的近红外模型对接种鉴定的茎秆木质素含量、单体组分比例进行测定,并进行相关性分析和QTL定位。结果表明在2013年和2014年RIL群体茎秆菌斑大小与木质素含量呈极显著负相关,相关系数分别为–0.348和–0.286,与单体G/S呈显著正相关,相关系数分别为0.198和0.167。2014年F2群体菌斑大小与木质素含量呈极显著负相关,相关系数为–0.306,与单体G/S相关性为0.142。F2:3家系抗(感)植株茎部切片间苯三酚染色观察表明抗性较强的材料木质素含量高于抗性较弱的材料。根据已构建的重组自交系高密度SNP遗传图谱,利用复合区间作图法对上述性状进行QTL分析,共检测到18个QTL,其中9个菌核病抗性相关QTL分布于A05、A06、C04和C06染色体,单个QTL可解释的表型变异为2.38%~12.05%;3个木质素含量QTL分别位于A04、A05和C01染色体,单个QTL可解释表型变异的2.03%~13.75%。6个木质素单体G/S QTL分布于A08、C03和C07染色体,单个QTL可解释表型变异的2.06%~8.66%。本文研究结果为油菜菌核病抗性育种提供了新的思路和理论基础。  相似文献   

11.
广亲和基因的发现,克服了籼粳交杂种不育的矛盾,但杂种后代株高过高、抽穗期延迟等问题仍然限制着籼粳亚种间杂种优势的利用。本试验利用一个籼粳交(珍汕97/武育粳2号)双单倍体群体(doublehaploidpopulation,DH系)及其分别与两亲本回交构建的两个回交群体,考查了株高和抽穗期的遗传,将三个群体的表型值和两个回交群体的中亲优势值进行了数量性状位点(quantitativetraitlocus,QTL)检测及效应分析,并对结果进行了比较。2个性状在3个相关群体中一共检测到了21个主效QTL和10个上位性QTL,主效QTL的数目和贡献率都比上位性QTL大,而且,在10个上位性QTL中,发生在2个主效QTL间的互作有3个,主效QTL与背景位点间的互作有6个,2个互补位点间的互作仅有1个,进一步说明了主效QTL在株高和抽穗期遗传中的重要作用。比较加性和非加性QTL的作用,发现加性效应、显性效应和上位性效应是籼粳亚种间杂种株高和生育期变化的共同遗传基础。  相似文献   

12.
Xieyou9308 is the first commercial super hybrid rice released in 1996 in China. To clarify its genetic mechanism underlying high yield potential, a recombinant inbred line (RIL) population derived from the cross between the maintainer line XieqingzaoB (XQZB) and the restorer line Zhonghui9308 (ZH9308) and two derived backcross F1 (BCF1) populations were developed for the identification of quantitative trait loci (QTLs) related to ten important agronomic traits (tiller number (TN), heading date (HD), and grain yield per plant (GYPP), etc.). The BCF1 performance was closely correlated with the performance of their parental RILs according to both the analysis of broad-sense heritability (h B 2) and phenotypic correlation coefficient (PCC) in the two BCF1 populations, but not proved by QTL analysis. A total of 21 additive-effect main QTLs (M-QTLs), 22 dominant-effect M-QTLs, and 19 dominant-effect M-QTLs were detected with the WinQTLCart 2.50 software for the ten traits in the RIL and two BCF1 populations, respectively. Of theses, three QTLs (qHD7a, qPPP3a, and qPL10) of 21 were detected repeatedly in the RIL and one BCF1 populations, ten QTLs underlying four traits were only detected repeatedly in two BCF1 populations, and nine QTLs controlling more than two traits were detected repeatedly, the additive-effect QTLs and dominant-effect QTLs play an important role in the performance of agronomic traits and no epistatic QTL of additive by additive effect and dominant by dominant-effect was detected for all traits in three populations. This research is valuable for M-QTL related to important agronomic trait in future fine mapping and positional cloning.  相似文献   

13.
一个新的水稻花粉半不育性位点的定位分析   总被引:1,自引:0,他引:1  
利用一套以籼稻珍汕97B为背景的粳稻日本晴染色体片段代换系,鉴定发现1个半不育的代换系。全基因组基因型分析表明,该代换系仅含3个粳稻导入片段,而其他遗传背景与珍汕97B相同。在湖北武汉和海南分别种植其衍生的F2和F3分离群体,采用单标记分析和区间作图法分析花粉育性和小穗育性的数量性状位点(QTL),结果表明,该代换系的半不育性是第2染色体上的粳稻导入片段引起的,该片段RM262~RM475区间存在1个新的影响花粉育性的QTL,其贡献率为13.9%。研究结果将为进一步精细定位水稻育性QTL以及鉴定相关功能基因提供重要的试验基础。  相似文献   

14.
Chinese cabbage (Brassica rapa L. ssp. pekinensis) is one of the most important vegetables in China. However, the inheritance of yield-related traits in Chinese cabbage is poorly understood to date. To map quantitative trait loci (QTL) for yield-related traits in Chinese cabbage, a genetic linkage map was constructed with 192 doubled haploid (DH) lines. The genetic map was constructed based on 190 sequence-related amplified polymorphisms and 43 simple sequence repeats. QTL mapping was conducted for 11 yield-related traits in 170 DH lines derived from a cross between two diverse Chinese cabbage lines, ‘WZ’ and ‘FT’, under different environmental conditions. A total of 46 main QTL (M-QTL) and 7 epistatic QTL (E-QTL) were identified. The phenotypic variation explained by each M-QTL and E-QTL ranged from 4.85 to 25.06 % and 1.85 to 13.29 %, respectively. The QTL-by-environment interactions were detected using the QTLNetwork 2.0 program in joint analyses of multi-environment phenotypic values. The phenotypic variation explained by each QTL and by QTL × environment interaction was 1.14–4.24 % and 0.00–1.26 %, respectively. Our results provide a better understanding of the genetic factors controlling leaf and head-related traits in Chinese cabbage.  相似文献   

15.
Grain size is a main component of rice appearance quality. In this study, we performed the SSR mapping of quantitative trait loci (QTLs) controlling grain size (grain length and breadth) and shape (length/breadth ratio) using an F2 population of a cross between two Iranian cultivars, Domsephid and Gerdeh, comprising of 192 individuals. A linkage map with 88 markers was constructed, which covered 1367.9 cM of the rice genome with an average distance of 18 cM between markers. Interval mapping procedure was used to identify the QTLs controlling three grain traits, and QTLs detected were further confirmed using composite interval mapping. A total of 11 intervals carrying 18 QTLs for three traits were identifed, that included five QTLs for grain length, seven QTLs for grain breadth, and six QTLs for grain shape. A major QTL for grain length was detected on chromosome 3, that explained 19.3% of the phenotypic variation. Two major QTLs for grain breadth were mapped on chromosomes 3 and 8, which explained 34.1% and 20% of the phenotypic variation, respectively. Another two major QTLs were identified for grain shape on chromosomes 3 and 8, which accounted for 27.1% and 20.5% of the phenotypic variance, respectively. The two QTLs that were mapped for grain shape coincided with the major QTLs detected for grain length and grain breadth. Intrestingly, gs2 QTL specific to grain shape was detected on chromosome 2 that explained 15% of the phenotypic variation.  相似文献   

16.
水稻孕穗期耐热性QTLs分析   总被引:15,自引:1,他引:15  
水稻籼粳亚种间杂种优势利用是提高水稻产量的重要途径。然而,异常高温或低温导致籼粳亚种间杂种育性下降是影响其优势利用的主要因素之一。本研究以USSR5(粳稻)/广解9号(籼稻)//USSR5回交群体为供试材料,构建了相应的分子连锁图谱,分别以高温处理下直接小穗育性及小穗育性热敏感指数为指标,对水稻孕穗期高温耐热性及其相对耐热性进行数量性状位点(QTLs)分析。结果表明,在第2、4和5染色体上检测到孕穗期耐热性相关的QTL各一个,对表型变异的解释率为6.4%~15.8%;在第4、8染色体上分别检测到与孕穗期相对耐热性相关的QTL,qhts-4和qhts-8,LOD值分别为3.81和2.86,对表型变异的解释率分别为16.8%和9.9%。对其进一步的上位性分析表明,有8条染色体的4对位点存在基因间互作,小穗育性耐热性除受主效QTL控制外,还受基因间互作及修饰基因的影响。  相似文献   

17.
Preharvest sprouting (PHS) is one of the most important factors affecting the cereal production worldwide, in regions characterized by rainfall and high humidity during harvest season. It is sometimes a problem in rapeseed (Brassica napus L.), especially in production of commercial F1 hybrids. To detect quantitative trait loci (QTL) controlling PHS, a F2 population consisting of 269 F2:3 lines was created from the cross between a PHS-tolerant line (117AB) and a PHS-susceptible line (7,605). A linkage map was constructed using 35 Simple Sequence Repeat markers and 242 Amplified Fragment Length Polymorphism markers. PHS was measured as a percentage of sprouted seeds on the mother plant, 7 days after physiological maturity. Five putative QTLs for PHS were detected and located on LG2 (N11) and LG7 (N3), respectively. Phenotypic variance explained by each QTL ranged from 4.11 to 50.78% and the five putative QTLs explained about 75.63% of the total phenotypic variance. A major QTL was identified on LG2 (N11) flanked by P3C4180 and C6C13160, which explained 50.78% of the total phenotypic variance. Meanwhile, we detected four significant epistatic interactions with a total contribution of 17.16% of the total phenotypic variance.  相似文献   

18.
Root system development is an important target for improving yield in rice. Active roots that can take up nutrients more efficiently are essential for improving grain yield. In this study, we performed quantitative trait locus (QTL) analyses using 215 recombinant inbred lines derived from a cross between Xieqingzao B (XB), a maintainer line with short roots and R9308, a restorer line with long roots. Only a QTLs associated with root length were mapped on chromosomes 7. The QTL, named qRL7, was located between markers RM3859 and RM214 on chromosome 7 and explained 18.14–18.36% of the total phenotypic variance evaluated across two years. Fine mapping of qRL7 using eight BC3F3 recombinant lines mapped the QTL to between markers InDel11 and InDel17, which delimit a 657.35 kb interval in the reference cultivar Nipponbare. To determine the genotype classes for the target QTL in these BC3F3 recombinants, the root lengths of their BC3F4 progeny were investigated, and the result showed that qRL7 plays a crucial role in root length. The results of this study will increase our understanding of the genetic factors controlling root architecture, which will help rice breeders to breed varieties with deep, strong and vigorous root systems.  相似文献   

19.
鉴定杂交粳稻亲本产量性状配合力的标记位点有助于利用分子标记辅助选择技术改良亲本配合力、提高杂交粳稻竞争优势水平。利用9个粳稻BT型不育系和10个恢复系, 按照北卡罗林那设计II (North Carolina Design II)配制90个F1组合,在南京和盱眙两个环境下种植,测定了各亲本产量性状的配合力和SSR分子标记基因型;结合二者数据鉴定了6个产量性状配合力的标记位点。结果表明,在两个环境下综合评价配合力较优的不育系是BT-18A和武羌A,恢复系是C418。与亲本单株有效穗数、每穗总粒数、每穗实粒数、结实率、千粒重和单株日产量性状配合力显著相关的SSR标记位点,南京环境下分别检测到8、13、11、6、6和2个;盱眙环境下分别检测到12、21、8、15、10和7个;2个环境下都检测到的分别有4、11、5、3、5和1个。标记位点杂合基因型显示正向优势的,南京环境下占74% (34/46);盱眙环境下占53% (39/73)。2个环境下都检测到的标记位点中,有3个各自与3个产量性状配合力共相关;另有3个各自与2个产量性状配合力共相关;其余的只与单个产量性状配合力显著相关。数据库检索发现两环境下都检测到的标记位点中,有10个其附近存在控制相应性状的基因/QTL。讨论了利用鉴定出的标记位点改良粳稻恢复系产量性状配合力的策略。  相似文献   

20.
Presence of substantial heterosis and economic hybrid seed production are two most desirable components for success of any commercial hybrid breeding programme. Thermosensitive genic male sterile (TGMS) lines of rice, in this regard, have tremendous potential in realizing further quantum jump in yield and economical hybrid seed cost. Analyses for combining ability and heterosis over optimum (120N : 60P2O5 : 40K2O kg/ha) and high (200N : 90P2O5 : 60K2O kg/ha) fertility environments for six traits were made in 2 years (2001 and 2002) using 120 hybrids of inter‐ and intra‐subspecific nature derived from hybridization of 30 elite indica TGMS lines and four cultivars, viz., ‘Pant Dhan 4’ and ‘Ajaya’ (I = indica), ‘Taichung 65’ (J = japonica) and ‘IR 65598‐112‐2’ (TJ = tropical japonica) in line × tester mating design. Predominance of non‐additive genetic variance suggested good prospects of hybrid breeding. Pooled analysis revealed highly significant variances for lines, general combining ability (GCA), specific combining ability (SCA) and line x tester. TGMS line 365‐8S was the best general combiner for all the six traits including grain yield. Trend of relative mid‐parent heterosis for grain yield, panicle length, grain number per panicle and earliness in flowering was I/TJ > I/J > I/I. For panicle number per plant and 1000‐grain weight, trends were I/TJ > I/I > I/J and I/I > I/TJ > I/J, respectively. Grain yield recorded heterosis of 49.3%, 71.9% and 92.7% for I/I, I/J and I/TJ hybrid groups respectively. Effect of environments on the hybrid performance indicated better response of hybrids at high fertilizer dose. Study suggests greater prospects of combining improved japonica and tropical japonica germplasms having wide compatible gene with indica TGMS lines for exploitation of intersubspecific heterosis.  相似文献   

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