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1.
  1. The extent and intensity of impacts of multiple new dams in the Amazon basin on specific biological groups are potentially large, but still uncertain and need to be better understood.
  2. It is known that river disruption and regulation by dams may affect sediment supplies, river channel migration, floodplain dynamics, and, as a major adverse consequence, are likely to decrease or even suppress ecological connectivity among populations of aquatic organisms and organisms dependent upon seasonally flooded environments.
  3. This article complements our previous results by assessing the relationships between dams, our Dam Environmental Vulnerability Index (DEVI), and the biotic environments threatened by the effects of dams. Because of the cartographic representation of DEVI, it is a useful tool to compare the potential hydrophysical impacts of proposed dams in the Amazon basin with the spatial distribution of biological diversity. As the impact of Amazonian dams on the biota of both rivers and periodically flooded riparian environments is severe, DEVIs from different Amazonian tributary basins are contrasted with patterns of diversity and distribution of fish, flooded forest trees and bird species.
  4. There is a consistent relationship between higher DEVI values and the patterns of higher species richness and endemism in all three biological groups. An assessment of vulnerability at the scale of tributary basins, the assessment of biodiversity patterns related to DEVI, and the analysis of teleconnections at basin scale, demonstrate that recent construction of dams is affecting the biota of the Amazon basin.
  5. The evidence presented here predicts that, if currently planned dams are built without considering the balance between energy production and environmental conservation, their cumulative effects will increase drastically and represent a major threat to Amazonian biodiversity.
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2.
Abstract – Habitat connectivity is considered a central factor shaping ecological communities, and the effects of waterway barriers such as natural waterfalls on fish movements are expected to produce differing assemblage structures in riverine ecosystems. Here, we evaluate the influence of a sequence of waterfalls on the compositional dissimilarity of fish assemblages along the Madeira River, the largest tributary of the Amazon River. We found significant differences in species composition between rivers stretches located upstream and downstream of Teotônio waterfall and, to a less extent, Jirau waterfall, independently of the hydrological period. After accounting for the relative roles of local and regional factors in explaining fish compositional dissimilarity, we still observe a significant effect of the waterfalls. We conclude that these waterfalls act as natural ecological barriers limiting fish dispersal processes and discuss aspects of these ecological filters and the potential effects of two dams currently under construction in the Madeira River.  相似文献   

3.

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5.
  1. Freshwater environments host roughly half of the world’s fish diversity, much of which is concentrated in large, tropical river systems such as the Amazon. Fishes are critical to ecosystem functioning in the Amazon River basin but face increasing human threats. The basic biology of these species, and particularly migratory behaviour, remains poorly studied, in part owing to the difficulty associated with conducting tagging studies in remote tropical regions.
  2. Otolith microchemistry can circumvent logistical issues and is an increasingly important tool for studying fish life histories. However, this approach is still new in the Amazon, and its potential and limitations to inform fish conservation strategies remain unclear.
  3. Here, otolith microchemistry studies in the Amazon are reviewed, highlighting current possibilities, and several key factors that limit its use as a conservation tool in the Amazon are discussed. These include the dearth of spatiotemporal elemental data, poor understanding of environment–fish–otolith pathways, and insufficient funding, facilities, and equipment.
  4. A research initiative is proposed to harness the potential of this technique to support conservation in the Amazon. Key aspects of the proposal include recommendations for internal and external funding, which are critical to acquiring and maintaining technical staff, cutting-edge equipment, and facilities, as well as fostering regular scientific meetings and working groups. Meetings can facilitate a systematic approach to investigating environment–otolith pathways, broadening the chemical baseline for most Amazonian tributaries, and exploring potential valuable elements.
  5. These outcomes are urgently needed to conserve biodiversity and ecosystem functioning in the Amazon, especially given threats such as widespread hydroelectric damming. The initiative proposed here could make otolith microchemistry an important, cost-effective tool to inform and foster conservation in the Amazon, and act as a template for other imperilled tropical river basins, such as the Mekong and the Congo.
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6.
  1. Few conservation studies have examined fish communities in entire drainage basins, especially in developing regions such as Southeast Asia, one of the most diverse biomes globally. The aim of this study was to establish conservation projections for the whole of the Irrawaddy River system, based on fish diversity patterns, human impact, and environmental change.
  2. The Irrawaddy River is one of the five largest rivers in Southeast Asia. Although it has very high diversity of fish species and species endemism, our understanding of resident fish status remains poor.
  3. Based on 1,726 field survey and 1,056 database records, 470 fish species and their distribution patterns (i.e. alpha, beta, threatened species, and endemic species diversities) in sub-basins of the Irrawaddy drainage were identified. Canonical correspondence analysis of diversity and environmental patterns indicated that climatic factors had the largest effect on diversity, compatible with the species–energy theory.
  4. Fish conservation priorities of sub-basins were evaluated based on diversity patterns and human impact. The delta and Manipur basin regions were highlighted as areas of focus for future fish diversity conservation, and the importance of connectivity in the Irrawaddy main stem was demonstrated.
  5. The results of this study will be valuable for future management of the Irrawaddy basin and as a reference for other river basins when implementing protection strategies for fish diversity. This study also advocates the need for systematic investigations across entire drainage basins and further detailed studies on the ecological conditions of poorly studied river systems.
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7.
  1. In the context of the River Rhône restoration programme, the objective of this study was to assess the dispersal and population connectivity of the European chub, Squalius cephalus (Linnaeus, 1758) in a section of the natural, free-flowing part of the lower River Rhône.
  2. The elemental water signatures for Sr:Ca and Ba:Ca were measured at seven stations within the river section, including its tributaries and backwaters, to determine whether they could be differentiated by microchemistry. From August to October the signatures differed among three sectors of the study reach: the Rhône; the Ardèche; and the backwaters.
  3. The elemental signatures of the otoliths of 178 young-of-the-year (YOY) chub from the stations were measured to assess spawning areas and identify early migratory life histories. Analyses of otolith microchemistry identified the natal origin of 95% of the fish. Sr:Ca signatures of otoliths showed early downstream migration for 30.4% of the YOY chub; however, 70% of the fish recruited relatively close to their spawning origin suggesting a potential inshore retention of fish.
  4. The results showed (i) a non-negligible contribution of the tributaries and backwaters in the recruitment of fish into the main channel; and (ii) the ability of chub to migrate over several kilometres during their first few months of life.
  5. This study shows that the combination of water and otolith microchemistry analyses of fish growth increases the understanding of fish life history. Moreover, the study revealed that half of the YOY fish from this river section came from the tributaries and the other half came from reproduction in the River Rhône (despite its high anthropization).
  6. These methods offer promising future applications of otolith microchemistry for river management in the context of ecological rehabilitation, especially to assess the effectiveness of measures applied in the restoration of floodplain connectivity for riverine fish population conservation.
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9.
  1. Environmental water management seeks to balance competing demands between the water needed to sustain human populations and their economic activities and that required to sustain functioning freshwater ecosystems and the species they support. It must be predicated on an understanding of the environmental, hydrological, and biological factors that determine the distribution and abundance of aquatic species.
  2. The Daly River of the wet–dry tropics of northern Australia consists of a perennially flowing main stem and large tributaries, as well as many small to large naturally intermittent tributaries, and associated off‐channel wetlands. Increased groundwater abstraction to support irrigated agriculture during the dry season threatens to reduce dry‐season flows that maintain perenniality and persistence of freshwater fishes.
  3. Fish assemblages were surveyed at 55 locations during the dry season over a 2‐year period with the goal of establishing the key landscape‐scale and local‐scale (i.e. habitat) drivers of fish species distribution.
  4. Longitudinal (upstream/downstream) and lateral (river/floodplain) gradients in assemblage structure were observed with the latter dependent on the position in the river landscape. Underlying these gradients, stream flow intermittency influenced assemblage composition, species richness, and body size distributions. Natural constraints to dispersal were identified and their influence on assemblage structure was also dependent on position within the catchment.
  5. Eight distinct assemblage types were identified, defined by differences in the abundance of species within five groups differing in functional traits describing body size, spawning requirements, and dispersal capacity. These functional groups largely comprised species widely distributed in northern Australia.
  6. The results of the study are discussed with reference to the environmental flow needs of the Daly River and other rivers of northern Australia. The findings may also be applied to environmental flow management in savannah rivers elsewhere.
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10.
  1. Many fish species of greatest conservation need (SGCN) in Iowa and Minnesota, USA, have been in decline for decades. A key reason for the decline is the alteration and degradation of naturally flowing streams owing to land use changes resulting from agricultural practices. Populations of several fishes have been adversely affected by widespread stream channelization that has resulted in more homogeneous stream habitats throughout Iowa and Minnesota.
  2. The goal of this study was to determine the abiotic and fish assemblage characteristics associated with the presence of these rare fishes. Electrofishing and seining were used to sample fish assemblages and 43 abiotic characteristics were measured at 111 sites in the North Raccoon and Boone River basins in central Iowa and the Rock River and Beaver Creek basins in north-west Iowa and south-west Minnesota during 2016 and 2017.
  3. Six SGCN, including the federally endangered Topeka shiner (Notropis topeka), were included in statistical modelling to determine habitat and fish assemblage characteristics associated with their presence.
  4. Species-specific nonmetric multidimensional scaling ordinations indicated that abiotic characteristics and fish assemblages often differed between sites where SGCN were present and absent. Random forest and logistic regression models suggested that the presence of four of six SGCN were positively associated with species richness, whereas all other 10 important abiotic and fish assemblage variables were unique to only one or two of the six SGCN.
  5. Topeka shiners were present at 36% of sites and were positively associated with orangespotted sunfish (Lepomis humilis) catch per unit effort while being negatively associated with canopy cover and fantail darter (Etheostoma flabellare) catch per unit effort.
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11.
Abstract –  Human-induced habitat alteration is one of the main causes of the decline of freshwater fish populations. The watershed of the River Bidasoa (Spain) is an example of heavily fragmented habitat. The local brown trout ( Salmo trutta L.) population is disturbed, with evidence of poor recruitment as well as low adult densities in the main stem. Forty male and female adult migratory trout were tagged with external or internal radio transmitters and released. Fixed stations with data loggers and mobile antennae were used with daily surveys to track fish movements during the migration and spawning period (3 months). Migration distances did not exceed 10 km, and half of the fish never entered a tributary in the study area. Fragmentation because of weirs on the main stem apparently prevented fish from reaching their spawning destination. Fish that entered the tributaries were first confronted with an accessibility problem because of low discharge. However, each fish chose one tributary, without making attempts to run up in other tributaries. Once in the tributary, fish were restrained in their upstream movements by dams. The study area appeared to be isolated from the vast upper part of the watershed. Within the study area, upper parts of tributaries also seemed strongly disconnected from the main stem. This study illustrates the negative impact of river fragmentation on S. trutta migration pattern. Population sustainability can be directly affected through the low availability of spawning grounds for migratory fish. Long-term effects of fragmentation may cause reproductive isolation within watersheds, which in the case of trout also means isolated phenotypic population units.  相似文献   

12.
  1. Pelagic spawning riverine fish (pelagophils) spawn in free‐flowing river habitats with downstream drift of eggs and larvae but the spatial scale is often unknown, and this constitutes a major ecological knowledge gap.
  2. In the arid Darling River in south‐eastern Australia, the present objectives were: (i) to determine the potential downstream dispersal distance of young golden perch (Macquaria ambigua); and (ii) to evaluate whether provision of environmental water enhanced dispersal of young fish from Menindee Lakes to the lower Darling River (LDR) while also cueing further spawning in downstream lotic reaches.
  3. Golden perch spawned in unregulated lotic tributaries on a flood pulse and larvae drifted or dispersed >1,600 km downstream and entered large ephemeral productive floodplain lake nursery habitats as fully scaled fingerlings.
  4. Planned releases of environmental water cued golden perch spawning in the LDR and enabled juvenile fish to disperse downstream from the Menindee Lakes nursery into receiving populations in the LDR, Great Darling Anabranch, and southern Murray River, with some fish potentially completing an active migration of >2,100 km by age 1 year.
  5. The Darling River case study highlights the need for a system‐scale approach to the conservation management of pelagophilic fish, along with multi‐year perennial flow strategies to improve ecosystem integrity in large rivers globally.
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13.
  1. The Amazon basin has been subjected to extreme climatic events and according to climate change projections this hydrosystem could face changes in the natural dynamic of flood cycles that support the feeding and reproduction of many fish species, threatening aquatic biodiversity.
  2. Protected areas (PAs) are the main tools used to safeguard the biodiversity in the long term; however, they are fixed areas that could be subject to climate change, questioning their future efficiency in protecting biodiversity.
  3. The Amazon basin currently benefits from a relatively high level of protection as 52% of its catchment area is under the form of true PAs or indigenous lands. However, the capacity of these PAs to protect freshwater biodiversity remains unclear as they have generally been assessed with little regard to freshwater ecosystems and their hydrological connectivity. Here, the aim was to evaluate the effectiveness of PAs in representing the Amazon fish fauna under current and future climatic conditions.
  4. A macroecological approach was used to estimate the minimum size of the geographical range needed by each species to achieve long-term persistence, by a combined function of range size and body size, two ecological traits known to influence species extinction risk.
  5. In future the Amazon basin could risk losing 2% of its freshwater fish fauna owing to unsuitable climatic conditions, with a further 34% adversely affected. The present Amazon network of PAs will cover the minimum required range for species persistence for more than 60% of the freshwater fish species analysed under the future climate scenario. However, more than 25% of the future susceptible species are currently concentrated in large tributaries and in the central-lower Amazon floodplain where few PAs occur, highlighting the lack of appropriate conservation actions for these specific water bodies.
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14.
  1. Assessing biodiversity and understanding how it works is a prerequisite for species conservation. The Amazon basin is one of the main biodiversity hotspots where fish are heavily exploited for ornamental purposes.
  2. The ornamental trade heavily exploits the genus Apistogramma, which is one of the most species‐rich among Neotropical cichlids with 94 formally described species. This number is certainly underestimated owing to the limitations of conventional taxonomy, which is still too often based solely on morphological criteria and sometimes on few individuals.
  3. Most species of this genus have a high degree of endemism and are highly prized on the ornamental market, which could put them at risk. A few species are supposed to have extensive distributions, and in particular Apistogramma agassizii, present from the Amazon estuary up to the Ucayali and Marañon rivers in Peru.
  4. This study assessed the taxonomic status of 1,151 specimens of A. agassizii collected from 35 sites around Iquitos in the Peruvian Amazon. On the basis of molecular analyses (nuclear and mitochondrial DNA) and mate choice experiments, at least three biological species within the nominal A. agassizii were evidenced in the sampling area, which is extremely small compared with the known distribution of the species as initially described.
  5. According to the molecular calibrations, these three species would have diverged during the Plio‐Pleistocene. Two of them seem to be endemic from small sub‐basins, one from the Nanay River and the other from the Apayacu/Ampiyacu systems. A possible scenario that may explain the evolutionary history of these species is proposed.
  6. The conservation implications of these results on the estimation of the diversity of A. agassizii, of Apistogramma species in general, and of other Amazonian cichlids are discussed.
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15.
  1. The Amazon Basin is being degraded at unprecedented rates, yet conservation efforts have implemented protected areas to curb deforestation, leaving freshwater ecosystems vulnerable to degradation. Amazon freshwater ecosystems are largely unprotected because a terrestrial bias has limited the ability of science to affect policy.
  2. Overcoming this bias requires increasing exchange of information among stakeholders across the basin to raise awareness of threats to Amazon freshwater ecosystems and promote discussions and access to conservation solutions. To help address this need, this Special Issue collates 15 synthetic articles that advance knowledge and identify conservation solutions.
  3. Three articles highlight the importance of considering the hydrological and limnological processes that control the integrity of these freshwater ecosystems and offer new insights on how to extrapolate them across the basin.
  4. Three articles on crocodilians, aquatic mammals, and migratory fishes document threats and knowledge gaps, and identify the missing role of governments as an impediment to conservation of their populations.
  5. Three articles evaluate the multi-faceted effects of hydropower dams on fish, birds, and floodplain trees. They reinforce perceptions that dams are key environmental threats and offer guidance for improving protocols for dam site selection and impact assessment.
  6. Three articles assessing the effectiveness of protected areas to safeguard fish and aquatic invertebrates show there is an urgent need to redesign the Amazon protected area network to adequately protect freshwater biota.
  7. Three forward-looking articles show that: (i) conservation initiatives by local communities are ‘bright spots’ for freshwater conservation; (ii) microchemistry analyses of the ear bones of fishes could boost the knowledge base needed to conserve them; and (iii) strengthening the Amazon conservation framework requires a reversal of Brazil's current governmental priorities, remobilization of stakeholders, investments in capacity building, and expanding protections to terrestrial and freshwater ecosystems.
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17.
  1. River fish diversity is threatened by anthropogenic environmental alteration to landscapes. The early life-history stages of fish play an important role in maintaining diversity and population recruitment and can be heavily influenced by landscape patterns. Information on temporal and spatial distribution patterns of fish eggs and larvae is also important for biodiversity conservation and management of fish resources.
  2. The Yangtze River possesses a high diversity of fishes, including many commercially important species. The economy along the lower reach of the river is well developed, and most of the area is experiencing high pressure from human impacts. This section of the Yangtze River connects with the largest freshwater lake in China at the upstream end and flows into the estuary at the downstream end. These two landscape features are likely to have a significant impact upon the spatial distributions of fish egg and larval assemblages.
  3. Environmental variables, fish eggs, and larval assemblages were sampled in three locations, at Hukou, Anqing, and Jingjiang, in the lower reach of the Yangtze River. The results suggest that the higher number of species and greater abundance in upstream sites reflect the critical function of connectivity of Poyang Lake with the river for fish recruitment in the lower Yangtze. The delayed bloom of larval fish, occurrence of estuarine species, and a lower species number and abundance of freshwater fish downstream reflect the influence of tidal intrusion from the estuary.
  4. This study highlights the value of maintaining natural river–lakes connectivity in the Yangtze River as a conservation measure. The connected river–lake system should be designated as a priority area for fish resource protection in the lower reach of the Yangtze River. We recommend further measures to break down barriers between the river and other lakes and to restore the natural lateral connectivity of the floodplain ecosystem.
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20.
  1. Reservoirs and associated river fragments are novel ecosystems not experienced by fishes in their evolutionary history, yet they are now commonplace across the globe. Understanding how fishes use these novel habitats is vital to conservation efforts in contemporary riverscapes.
  2. Movement patterns of the endangered razorback sucker (Xyrauchen texanus) synthesized from tagging efforts in the upper Colorado River basin, USA, illustrate the applications of tagging technology and data sharing by multiple agencies to better understand the spatial ecology of large river fishes.
  3. Tagging studies between 2014 and 2018 in Lake Powell and its two main tributary rivers, the Colorado (unfragmented) and San Juan (waterfall‐fragmented), were used to quantify movement of razorback sucker within this river–reservoir habitat complex. In addition, facilitated translocations of fish upstream of a waterfall barrier in the San Juan River were assessed in 2016–2017.
  4. Extensive movement of fish occurred within and across river and reservoir habitats. Of 722 fish captured in the Colorado River arm of Lake Powell, 36% of re‐encounters occurred upstream in the Colorado or Green rivers, or fish dispersed through the reservoir and were detected in the San Juan River arm. Fourteen fish moved more than 600 km. In the San Juan arm of the reservoir, 29% and 20% of fish in 2017 and 2018, respectively, had moved ~30–40 km upstream below the waterfall in the San Juan River within a year. In 2016–2017, 303 fish were translocated upstream of the waterfall into the San Juan River, but 80% were re‐encountered downstream of the waterfall within a year.
  5. Long‐distance movements by razorback sucker were common within and among rivers and reservoirs illustrating how large river fish, in general, might maintain population connectivity in highly altered ecosystems.
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