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Nishikant Gupta Mark Everard Prakash Nautiyal Ishaan Kochhar Kuppusamy Sivakumar Jeyaraj Antony Johnson Atul Borgohain 《水产资源保护:海洋与淡水生态系统》2020,30(2):394-401
- Mahseer (Tor) fish species are critical components of locally adapted freshwater food webs across the Indian Himalayan biodiversity hotspot; however, multiple human stressors compounded by climate change have significantly depleted their populations over recent decades.
- Mahseer species are now considered locally vulnerable or endangered in many regions. Hydropower projects in particular have fragmented populations, impairing genetic exchange, obstructing migratory paths, and changing the structure and functioning of riverine habitats, especially of formerly fast‐flowing rivers.
- Worryingly, a literature survey and group discussions reveal that the increasing spread of non‐native fish species further compounds threats to mahseer and overall freshwater ecology. A better understanding of the current distribution, habitat requirement, and dispersal of non‐native fish is therefore essential to manage the growing threats to mahseer in the Indian Himalayan region.
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Elisabeth Lutz Philipp Emanuel Hirsch Karen Bussmann Joschka Wiegleb Hans‐Peter Jermann Roxane Muller Patricia Burkhardt‐Holm Irene Adrian‐Kalchhauser 《水产资源保护:海洋与淡水生态系统》2020,30(8):1566-1577
- Conservation of riverine fish often aims to improve access to spawning grounds and restore longitudinal connectivity by removing migration barriers, and involves substantial investments. However, these investments also enable non‐native predators to invade upstream into spawning areas and potentially adversely affect the recruitment of threatened freshwater fish through egg or fry predation.
- Detecting egg predation is often challenging. Visual inspections of fish gut contents may underestimate predation of soft materials such as eggs and fry, which limits the discovery of predators preying upon these life‐stages. DNA‐based detection assays may offer a more sensitive tool to assess predation of soft materials.
- A conservation issue was confirmed by developing and applying a species‐specific DNA‐based detection assay: invasive round goby (Neogobius melanostomus) prey on the eggs or fry of the threatened common nase (Chondrostoma nasus) in Switzerland.
- DNA‐based detection assays were also developed for five other valuable native fish species, including endangered salmonid and cyprinid river spawners. The applicability of the assays was confirmed in a series of laboratory and field feeding experiments involving eggs and fish tissue. In addition, this work provides a guiding framework for conservation managers regarding the use and applicability of different DNA‐based detection approaches for gut content analysis.
- The results of this study could inform local conservation measures – such as temporary reductions in the density of round goby at spawning sites prior to spawning – and demonstrate how targeted application of species‐specific molecular markers may advance freshwater fish management.
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- To assess the impacts of human activity on fishes and fish habitat, impact assessment tools use single‐ and multi‐species approaches depending on the ecological and socio‐economic objectives. In Canadian aquatic ecosystems, single‐ and multi‐species impact assessments are guided by the Species at Risk Act and Fisheries Act, respectively. Yet, for species protected under the Species at Risk Act, the sparse data often require alternative approaches to risk assessment.
- The goal of this study was to evaluate whether a database‐derived multi‐species tool – the Habitat Ecosystem Assessment Tool (HEAT) – can be used for single‐species impact assessments. Using an empirical example of proposed drain maintenance in a tributary of Lake St. Clair, the net loss of suitable habitat was evaluated across six conservation targets, ranging from single species, such as the pugnose shiner (Notropis anogenus) and the yellow perch (Perca flavescens), to the entire fish assemblage. Model outcomes were compared across various habitat suitability indices, spatial resolutions, and environmental habitat layers.
- The net loss of suitable habitat varied widely across conservation targets and was greatest for the rare specialist species (pugnose shiner). Single‐species conservation targets were more sensitive to variation in spatial resolution and uncertainty in model input parameters. The results of this study emphasize that single‐ and multi‐species conservation targets should not be considered equal, especially when species differ in abundance and niche breadth.
- This study demonstrates the flexibility of HEAT for evaluating potential impacts of human disturbance on fishes and their habitat. Future development of this tool should expand beyond physical habitat, to include other factors relevant to species distribution and survival (e.g. biotic interactions).
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David L. Morgan Karissa O. Lear Emma Dobinson Adrian C. Gleiss Travis Fazeldean Richard D. Pillans Stephen J. Beatty Jeff M. Whitty 《水产资源保护:海洋与淡水生态系统》2021,31(8):2164-2177
- Sawfishes (Family: Pristidae) are one of the most imperilled fish families worldwide. There is an increasingly urgent need to better understand the biology, ecology, and population status of the five sawfish species to develop more effective conservation measures. The dwarf sawfish, Pristis clavata, is one of the least researched members of the pristids, with literature limited to analysing disparate datasets or collations of rare encounters in northern Australia.
- This study examined the spatial ecology of dwarf sawfish using targeted surveys and acoustic telemetry to determine its habitat use in a macrotidal estuary in northern Australia. Seventeen dwarf sawfish were tagged with acoustic transmitters and monitored in the Fitzroy River estuary and adjacent King Sound (Kimberley, Western Australia) between August 2015 and November 2017.
- Dwarf sawfish observed within the Fitzroy River estuary and King Sound were juveniles, ranging between 740 and 2,540 mm in total length. Catch per unit effort of dwarf sawfish in the late dry season was relatively high in the estuary, with the catch rate in 2015 being one of the highest reported for any sawfish species.
- Acoustic detections revealed a distinct seasonal pattern in the use of different parts of the estuary and King Sound, which was found to be driven by salinity. Dwarf sawfish predominately occupied a single large pool near the terminus of the tidal limit in the late dry season (August–November), before transitioning to regions in closer proximity to the river mouth or in King Sound in the wet and early dry seasons (December–July).
- Given the high abundance and residency of dwarf sawfish in the Fitzroy River estuary, this area is an important nursery for the species during the late dry season and should be formally recognized as a habitat protection area for the species.
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Simone Fattorini Barbara Fiasca Tiziana Di Lorenzo Mattia Di Cicco Diana M. P. Galassi 《水产资源保护:海洋与淡水生态系统》2020,30(8):1483-1504
- Species of conservation concern are usually considered important elements in site prioritization for biodiversity conservation. To overcome the lack of information on species conservation status, multidimensional measures of species rarity can be used as proxies of species vulnerability.
- Under this assumption, a two‐step protocol for site prioritization of aquatic groundwater‐dependent ecosystems is proposed using invertebrate vulnerability estimated from species' traits. In the first step, each species occurring in the sites of interest are scored according to their vulnerability. In the second step, sites are prioritized using species' scores.
- Species vulnerability scores are based on five dimensions, for which various traits are scored: (i) geography, (ii) ecology, (iii) biology, (iv) population, and (v) evolutionary history. For each species, the scores of the various traits belonging to the same dimension are multiplied to obtain a synthetic score. These scores are then ranked into four classes and, for each dimension, each species receives a new score that reflects its rank. The sum of these scores represents the species' overall score.
- Site conservation priorities are assessed by combining species scores into three indices: Sum of Species Scores, Biodiversity Conservation Concern (which relates the sum of species scores with the local species richness) and Groundwater Biodiversity Concern (which is the average of the former two). The protocol is illustrated using case studies in Italy and it is fully implemented in the software AQUALIFE which is freely available at: http://app.aqualifeproject.eu by registered users.
- Sensitivity analyses showed that the protocol is robust against the lack of information on species biology or sampling limitations. However, trait scoring rests with the user, who must be familiar with the study group.
- This approach can be applied at any spatial scale and to different types of aquatic groundwater‐dependent ecosystems.
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Zeb Tonkin Adrian Kitchingman Ben Fanson Jarod Lyon Renae Ayres Joanne Sharley Wayne M. Koster Justin O'Mahony Graeme Hackett Paul Reich Robin Hale 《水产资源保护:海洋与淡水生态系统》2020,30(7):1385-1396
- Removal of instream woody habitat (IWH) is one factor attributed to declines in fish populations worldwide. Restoration of IWH to help fish populations recover is now common; however, quantitative predictions about the outcomes of these interventions is rare. As such, quantitative links between IWH and fish abundance is of interest to managers to inform conservation and restoration activities.
- Links between instream habitat attributes, especially IWH, and selected fish species of recreational, cultural, and ecological significance were explored at 335 sites spanning eight streams across south‐eastern Australia. Data were collected on fish abundance and length, IWH density and a range of other habitat attributes at a scale that incorporated at least one of each of the major mesohabitat types (functional river elements). The data were analysed using Bayesian hierarchical generalized linear mixed models to examine fish habitat associations and used to make quantitative predictions of responses to future restoration.
- Strong positive relationships were found between fish abundance and IWH density and the strength of this relationship varied between species and waterways. Murray cod (Maccullochella peelii), a species commonly targeted by IWH interventions, displayed the strongest association with IWH density. River blackfish (Gadopsis marmoratus) also showed a significant relationship with IWH, but this effect was waterway specific. Fish length was only related to IWH for river blackfish. These results may reflect differences in the life histories of these two species. We suggest that differences in habitat association through ontogeny may be more relevant at smaller spatial scales.
- The results generated in this study can be used to guide waterway restoration and develop quantitative predictions about how fish might respond to IWH interventions across south‐eastern Australia. This approach provides a powerful quantitative framework within which to explore management options and objectives, and to test our predicted responses to habitat restoration.
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Alexandros A. Karamanlidis Styliani Adamantopoulou Argyris A. Kallianiotis Eleni Tounta Panagiotis Dendrinos 《水产资源保护:海洋与淡水生态系统》2020,30(5):928-936
- Small‐scale fisheries may pose a serious threat to the conservation of marine mammals. At the same time various factors have led to the decline of small‐scale fisheries, often making them unsustainable. Current rates of biodiversity loss and the reduction of fish stocks and fisheries dictate a thorough understanding of fisheries‐related issues and the implementation of effective management actions.
- The Mediterranean monk seal is one of the most endangered marine mammals on Earth; its survival in the eastern Mediterranean Sea is threatened by negative interactions with fisheries. A nationwide questionnaire survey among fishers and port police authorities was carried out in Greece to describe the main characteristics of small‐scale fisheries, and to understand the nature and assess the magnitude of negative interactions between the monk seal and these fisheries. Questionnaire information was verified by a second round of interviews during landings.
- The main attributes of the fishers, their fishing boats, and their practices were characteristic of the small‐scale fisheries sector. Overfishing was considered the main reason for fish‐stock reduction, and negative interactions with marine mammals was considered the main issue for the fishing sector.
- Monk seals were present, caused damage, and got accidentally entangled in fishing gear throughout Greece. Damage to fishing gear was recorded mainly during spring and summer, and on average affected 21% of all fishing trips and 1% of nets deployed during a fishing trip.
- Based on these results, the implementation of general and specific nationwide fishery management and conservation actions are proposed. These actions are mainly aimed at improving fish stock status, changing the behaviour of the fishers, and mitigating seal–fishery interactions in Greece, while promoting the recovery of the Mediterranean monk seal in the eastern Mediterranean Sea.
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Maxine P. Piggott Samuel C. Banks Ben T. Broadhurst Christopher J. Fulton Mark Lintermans 《水产资源保护:海洋与淡水生态系统》2021,31(1):173-184
- Detecting rare species is often a necessity for conservation and management, yet challenging for many field survey methods. Environmental DNA (eDNA) is a highly promising solution that has been shown to outperform many established survey methods.
- Macquarie perch (Macquaria australasica) is an endangered native species that has declined significantly in range and abundance. Detection of M. australasica was compared with an abundant alien fish species (Oncorhynchus mykiss) using eDNA and three conventional survey methods: gill nets, electrofishing and fyke nets.
- eDNA occupancy estimates for both fish species were compared using four different models to investigate what effect these differences have on false positives and false negatives for the rare and common fish species. These models used unadjusted eDNA detections in water samples, eDNA detections that have been screened using a limit of detection method to remove potential false positives, eDNA data supplemented with a second survey method, or eDNA data augmented with sequencing of positive polymerase chain reaction replicates.
- eDNA surveying as a single detection method was found to be more efficient and sensitive compared with each capture method separately and combined. Occupancy estimates for the common and rare species did not vary significantly between the four site occupancy-detection models, suggesting that supplementary data may not have as much effect on occupancy estimates compared with other approaches such as temporal or spatial sampling.
- We conclude that eDNA outperforms the three established survey methods for both a rare and common freshwater fish species. Although there was no significant effect of augmenting eDNA survey methods with other survey data, additional data may improve confidence in detection, and provide confirmatory evidence for unexpected or new detections of a species.
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Casey A. Pennock Mark C. McKinstry Charles N. Cathcart Keith B. Gido Travis A. Francis Brian A. Hines Peter D. MacKinnon Skyler C. Hedden Eliza I. Gilbert Christopher A. Cheek David W. Speas Katherine Creighton Darek S. Elverud Benjamin J. Schleicher 《水产资源保护:海洋与淡水生态系统》2020,30(8):1540-1551
- Reservoirs and associated river fragments are novel ecosystems not experienced by fishes in their evolutionary history, yet they are now commonplace across the globe. Understanding how fishes use these novel habitats is vital to conservation efforts in contemporary riverscapes.
- Movement patterns of the endangered razorback sucker (Xyrauchen texanus) synthesized from tagging efforts in the upper Colorado River basin, USA, illustrate the applications of tagging technology and data sharing by multiple agencies to better understand the spatial ecology of large river fishes.
- Tagging studies between 2014 and 2018 in Lake Powell and its two main tributary rivers, the Colorado (unfragmented) and San Juan (waterfall‐fragmented), were used to quantify movement of razorback sucker within this river–reservoir habitat complex. In addition, facilitated translocations of fish upstream of a waterfall barrier in the San Juan River were assessed in 2016–2017.
- Extensive movement of fish occurred within and across river and reservoir habitats. Of 722 fish captured in the Colorado River arm of Lake Powell, 36% of re‐encounters occurred upstream in the Colorado or Green rivers, or fish dispersed through the reservoir and were detected in the San Juan River arm. Fourteen fish moved more than 600 km. In the San Juan arm of the reservoir, 29% and 20% of fish in 2017 and 2018, respectively, had moved ~30–40 km upstream below the waterfall in the San Juan River within a year. In 2016–2017, 303 fish were translocated upstream of the waterfall into the San Juan River, but 80% were re‐encountered downstream of the waterfall within a year.
- Long‐distance movements by razorback sucker were common within and among rivers and reservoirs illustrating how large river fish, in general, might maintain population connectivity in highly altered ecosystems.
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Abigail Martínez‐Rendis Gilberto Acosta‐Gonzlez Jesús Ernesto Arias‐Gonzlez 《水产资源保护:海洋与淡水生态系统》2020,30(2):273-289
- Coral reef biodiversity is rapidly decreasing as a result of the loss of coral cover, which modifies the structure and functioning of the ecosystem. Understanding how coral reef communities respond in space and over the long term is essential in order to implement management strategies and reduce the effects of biodiversity loss on coral reefs.
- Fish, coral, and algae communities were used as indicators to evaluate changes in coral reef systems. The variation of these communities was studied in a marine protected area composed of three management zones in Cozumel Coral Reef National Park in Quintana Roo, Mexico, over a period of 11 years (2004–2014). The following parameters were monitored annually: (i) total fish density; (ii) fish trophic group densities; (iii) species richness and three fish diversity indices; (iv) relative scleractinian coral cover; and (v) relative macroalgae cover.
- In the years in which coastal development, such as the construction of a marina, took place, an increase in the abundance of territorial herbivorous and planktivorous fish was observed. As the coral recovered, macrocarnivores and sessile benthic invertivores were re‐established, whereas scraper herbivores showed no changes in the period of study in any of the three management zones.
- Coral cover recovery showed rapid phase‐shift reversal (phase‐shift, macroalgae dominance over coral) in the three zones. Even though the fish density and coral cover recovered, the diversity indices of each fish trophic group exhibited a reduction in the three management zones over time.
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Rowshyra A. Castaeda Nicholas E. Mandrak Stuart Barrow Olaf L. F. Weyl 《水产资源保护:海洋与淡水生态系统》2020,30(7):1424-1436
- The eradication of invasive species is a management strategy implemented to eliminate adverse impacts of invaders on native species communities. After eradications, follow‐up studies are done to confirm eradication of the invasive species and the short‐term recovery of the native species, but long‐term monitoring to confirm full population recovery and stability is often not completed.
- In this study, long‐term monitoring of native fishes was carried out over 5 years after the eradication of an invasive fish from the Rondegat River, South Africa. Forty‐six sites distributed along four river sections were sampled for presence/absence using underwater cameras and snorkel surveys. Density data were collected by snorkel surveys.
- Using multi‐season occupancy models, the annual probability of colonization and local extinction of the native fishes and annual rate of change in occupancy along the river were estimated. Changes in native fish densities across time and across the control and treatment sections were analysed using Kruskal–Wallis analysis, followed by Dunn's post‐hoc test.
- Probability of colonization and local extinction differed for each native fish species and may have been affected by extrinsic factors, such as rainfall, and intrinsic density‐dependent factors, hypothesized from the density data. The occupancy rates of change revealed that the two Near Threatened fish species have reached an occupancy dynamic equilibrium but the Endangered fish has not, suggesting that other conservation efforts may be needed.
- Long‐term monitoring of native fishes after an eradication programme has confirmed the successful removal of the invader and the recovery and stability of the community. However, successful eradication was not sufficient for full recovery of all species; additional conservation management strategies are needed to secure the population stability and persistence of endangered fishes. We recommend that eradication programmes, regardless of locality, should employ long‐term monitoring to ensure full recovery of a native fish community.