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1.
红花石蒜ISSR-PCR反应体系的建立   总被引:9,自引:2,他引:9       下载免费PDF全文
以红花石蒜叶片基因组DNA为模板,分析了模板DNA、引物、dNTPs、Mg2 的浓度及Taq DNA聚合酶的用量对ISSR-PCR扩增结果的影响.建立了石蒜ISSR分析最优化的反应体系及应用程序:即25 μL反应体系中,有20 ng模板DNA、0.5 μmol·L-1随机引物、150 μmol·L-1 dNTPs、2.0 mmol·L-1 Mg2 、1.0 U Taq DNA聚合酶.反应程序为:94 ℃预变性5 min;然后45个循环:每个循环94 ℃变性45 s,55 ℃退火60 s,72 ℃延伸2 min;循环结束后72 ℃延伸7 min.  相似文献   

2.
在提取高质量八角基因组DNA的基础上,通过对其RAPD反应体系的Taq DNA聚合酶、dNTPs浓度、Mg2+浓度、引物浓度等因子的优化,建立了稳定、重复性高的八角RAPD-PCR反应体系.研究结果表明,在25 μL PCR反应体系中,含1.0 UTaq DNA聚合酶,0.15 mmol·L-1 dNTPs,2.0mmol·L-1 Mg2+,2.0 μmol·L-1引物,20~ 80 ng模板.最佳反应程序为,94℃预变性5 min,扩增后94℃变性30 s,31 ~37℃退火30 s,72℃延伸30 s,35个循环;72℃完全延伸7 min,4℃保存.在建立RAPD-PCR反应体系的基础上,从240条RAPD引物中筛选出15条扩增条带清晰、稳定性好的引物,并通过各引物的退火温度梯度实验,确定了各引物的最适退火温度.  相似文献   

3.
利用正交设计优化茶树ISSR反应体系   总被引:2,自引:0,他引:2  
为优化茶树ISSR分子标记反应体系,对影响茶树ISSR反应较大的Mg2+浓度、dNTP浓度、模板DNA浓度、TaqDNA聚合酶浓度、引物浓度5个因素在4水平上进行优化试验,建立了适合于茶树ISSR-PCR(Inter Simple Sequence Repeats-Polymerase Chain Reaction)的最佳体系:20μL反应体系中,TaqDNA聚合酶0.75U/μL,10×buffer(含Mg2+)2.0mmol·L-1,模板DNA20ng,dNTP0.1mmol·L-1,引物0.3μmol·L-1。反应程序为:94℃预变性5min,94℃变性1min,50~60℃退火40s,72℃延伸90s,34次循环,72℃延伸7min,4℃保存。  相似文献   

4.
鹅掌楸ISSR-PCR反应体系的建立及优化   总被引:2,自引:0,他引:2  
为建立鹅掌楸简单序列重复区间扩增ISSR的PCR优化反应体系,以鹅掌楸叶片基因组DNA为材料,系统地测试了模板DNA、引物、dNTPs、Mg2+浓度、TaqDNA聚合酶用量及退火温度对ISSR-PCR反应体系的影响。结果表明:优化的PCR反应体系为:20μL总体系中,含30 ng模板DNA,0.3μmol.L-1随机引物,0.2 mmol.L-1dNTPs,1.4 mmol.L-1Mg2+,0.8 UTaqDNA聚合酶;最佳退火温度为60℃;PCR反应程序为:94℃预变性5 min;94℃变性1 min,60℃退火45 s,72℃延伸2 min;45个循环;72℃再延伸7 min。  相似文献   

5.
狗牙根ISSR—PCR反应体系的建立与优化   总被引:2,自引:0,他引:2  
以改良的CTAB法提取的狗牙根叶片DNA为模板,采用单因素多水平方法对狗牙根ISSR反应体系进行构建和优化,系统分析Taq酶、Mg2+、模板DNA、dNTPs、引物和buffer这6种1SSR反应成分的浓度对扩增结果的影响,结果表明:20.0μL PCR反应体积中,20.0 ng模板DNA,0.4 μmol/L引物,0.5mmol/L Mg2+,0.05mmol/L dNTPs,0.2U TaqDNA聚合酶,2.0 μL 10×buffer.反应程序为;94℃预变性5 min;94℃变性45 s,55 C退火45 s,72℃延伸1.5 min,35个循环;再72℃延伸7 min,4℃保温.  相似文献   

6.
以漾濞核桃中的大姚三台核桃为实验材料,通过对影响RAPD扩增结果的主要因子Tag酶、Mg+2、引物、模板DNA、dNTPs等不同的浓度和组合的试验研究,确定了漾濞核桃的最适反应体系和扩增程序,即在25μL反应体系中,0.75 u.L-1Taq DNA聚合酶,3.0 mmol.L-1Mg+2,0.3 mmol.L-1引物,含1.6 mg.L-1模板,2.5 ul 10×Buffer,dNTPs各0.2 mmol.L-1。扩增程序为:94℃预变性300 s,94℃变性40 s,36℃退火60 s,72℃链延伸120 s,45次循环后,72℃延伸600 s。  相似文献   

7.
油茶随机扩增多态DNA条件的研究   总被引:10,自引:0,他引:10  
以改进的CTAB法提取油茶嫩叶总DNA,进行随机扩增多态DNA(RAPD)分析,分别测试了Mg2+浓度、引物浓度、dNTP浓度、模板DNA浓度和TaqDNA聚合酶用量对反应结果的影响,确定了油茶RAPD分析的最适反应体系:在25μlPCR反应体积中,含20ng模板DNA,2 5mmol·L-1MgCl2,0 2mmol·L-1dNTP,0 3μmol·L-1引物,1UTaqDNA聚合酶。扩增程序为:94℃预变性180s;94℃变性60s,37℃退火90s,72℃延伸120s,反应40个循环;最后在72℃延伸5min。  相似文献   

8.
以七叶树新鲜叶片为材料,研究了七叶树RAPD分析过程中的影响因素包括Taq酶、Mg2+、dNTP、引物、模板DNA浓度、变性时间、循环次数等,建立了适合七叶树RAPD反应的PCR体系。即20μl反应体系中含有dNTP 0.25 mmol/L,Mg2+2.5 mmol/L,Taq酶1.0U,引物0.8μmol/L,DNA模板50ng。扩增程序为:94℃预变性5min,然后40个循环(94℃变性30 s,33℃退火40 s,72℃延伸60 s),最后72℃延伸10min,4℃保存。  相似文献   

9.
萱草属植物ISSR-PCR反应体系的优化   总被引:1,自引:0,他引:1  
以萱草属的3种植物为材料,对影响ISSR-PCR扩增效果的因素Taq酶用量、Mg2 浓度、dNTP用量、引物用量、模板DNA浓度以及退火温度等指标进行单因子筛选和优化,建立了适合萱草属植物ISSR-PCR分析的最佳PCR反应体系:20μL反应体系中Taq酶0.6U、Mg2 1.8 mmol/L、1×Buffer 2 μL、dNTP0.2 mmol/L、引物0.6mmol/L、DNA模板10 ng/μL.扩增程序为94℃预变性5 min,94℃变性40 s,52℃退火45 s,72℃延伸1.50 min,共39个循环;72℃完全延伸5 min,4℃保持.该反应体系及扩增程序扩增谱带清晰,产物量多,为利用ISSR-PCR分子标记研究萱草属植物的遗传多样性提供标准反应条件.  相似文献   

10.
SRAP标记体系优化及在茶树种质资源研究中的应用   总被引:2,自引:0,他引:2  
以Me3和Em5正反向引物组合对凤凰水仙茶树品种进行了SRAP分析体系的优化。结果表明:茶树SRAP-PCR最佳反应体系为:Mg2+浓度3.0 mmol.L-1;Taq酶2.0 U;dNTPs浓度0.2 mmol.L-1;引物浓度2.0μmol.L-1;10×Buffer 2.0μL;模板DNA 20 ng;反应总体积为25μL。经过重复试验,确定茶树SRAP-PCR扩增程序为:94℃预变性5 min;94℃变性1 min,35℃复性1 min,72℃延伸100 s,5个循环;94℃变性1 min,50℃复性1 min,72℃延伸100 s,35个循环;最后72℃延伸5 min。采用已优化的体系对30份茶树品种进行SRAP分析,经2%的琼脂糖凝胶电泳得到了清晰且重复性好的扩增谱带,说明该反应体系稳定可靠,适用于茶树种质资源的分子标记分析。  相似文献   

11.
Buruk K  Sokmen A  Aydin F  Erturk M 《Fitoterapia》2006,77(5):388-391
The Eastern Black Sea Region has an extensive flora because of ample rainfall lasting all year. In this study, antimicrobial effects of 74 crude extracts of 22 endemic plants were investigated. Among the 30 active crude extracts, water-insoluble crude extracts from Betula medwediewii, Heracleum platytaenium, Primula longipes, Anthemis cretica ssp. argaea and Centaurea helenioides were the prominent ones with their MIC values.  相似文献   

12.
13.
从落叶松梢栖真菌筛选出对落叶松枯梢病病原菌有抑制作用的菌株,对落叶松枯梢病进行生物防治。将自落叶松梢部分离到的11种梢栖真菌与落叶松枯梢病病原菌进行对峙培养,根据被覆盖程度、抑菌率、拮抗系数和防治预试验的结果,综合评价后发现:粪生粪壳、深绿木霉和球毛壳3种梢栖真菌对落叶松枯梢病有良好的拮抗作用。利用这3个菌株在黑龙江省勃利县通天一林场国富沟进行林间防治试验,结果表明:防治效果为粪生粪壳>代森锰锌400倍液>深绿木霉>球毛壳;深绿木霉和粪生粪壳喷洒浓度50%和球毛壳喷洒浓度75%时,真菌多样性最多,梢栖真菌系统较其他浓度更为稳定,与化学防治相比,既达到了防治目的又具有不污染环境的优势。  相似文献   

14.
Screening of antioxidant activity of three Euphorbia species from Turkey   总被引:1,自引:0,他引:1  
Euphorbia acanthothamnos, E. macroclada and E. rigida were investigated for their antioxidant activity. The antioxidant potential of extracts of E. acanthothamnos, E. macroclada and E. rigida was evaluated using different complementary antioxidant tests.  相似文献   

15.
A screening was conducted with 26 plants collected in the Brazilian southeast region, to identify plant extracts with antibacterial properties against Aeromonas hydrophila, Bacillus subtilis, Pseudomonas aeruginosa and Staphylococcus aureus. Initially, the agar diffusion method was employed. Then, those extracts presenting activity were submitted to a broth microdilution assay to determine the minimal inhibitory concentration (MIC) and minimal bactericidal concentration (MBC). It was observed that 13 of the tested extracts showed antibacterial activity. The best results were obtained with those from Lantana lilacina and Phyllanthus tenellus.  相似文献   

16.
An understanding of growth and photosynthetic potential of subtropical rainforest species to variations in light environment can be useful for determining the sequence of species introductions in rainforest restoration projects and mixed species plantations. We examined the growth and physiology of six Australian subtropical rainforest tree species in a greenhouse consisting of three artificial light environments (10%, 30%, and 60% full sunlight). Morphological responses followed the typical sun-shade dichotomy, with early and late secondary species (Elaeocarpus grandis, Flindersia brayleyana, Flindersia schottiana, and Gmelina leichhardtii) displaying higher relative growth rate (RGR) compared to mature stage species (Cryptocarya erythroxylon and Heritiera trifoliolatum). Growth and photosynthetic performance of most species reached a maximum in 30–60% full sunlight. Physiological responses provided limited evidence of a distinct dichotomy between early and late successional species. E. grandis and F. brayleyana, provided a clear representation of early successional species, with marked increase in Amax in high light and an ability to down regulate photosynthetic machinery in low light conditions. The remaining species (F. schottiana, G. leichhardtii, and H. trifoliolatum) were better represented as falling along a shade-tolerant continuum, with limited ability to adjust physiologically to an increase or decrease in light, maintaining similar Amax across all light environments. Results show that most species belong to a shade-tolerant constituency, with an ability to grow and persist across a wide range of light environments. The species offer a wide range of potential planting scenarios and silvicultural options, with ample potential to achieve rapid canopy closure and rainforest restoration goals.  相似文献   

17.
Insecticidal activity of Vitex mollis   总被引:3,自引:0,他引:3  
Organic extracts from the leaves of Vitex mollis were assessed for their toxic effect on fall armyworm neonate larvae (Spodoptera frugiperda), an important insect pest of corn. The extracts showed insecticidal and insect growth regulatory activity, being CHCl(3)-MeOH (1:1) extract the most active, also found to be toxic in the Artemia salina test.  相似文献   

18.
Ungulate browsing greatly influences regeneration dynamics of some forest ecosystems, yet the relationship between browse susceptibility and foliar chemistry of forest tree seedlings is not well understood. We applied field fertilization (15N-9P-10K controlled-release fertilizer at 0, 20, 40, and 60 g per seedling) and investigated how subsequent changes in terpenoid production and foliar nutrition influence ungulate browse preference for Douglas-fir (Pseudotsugamenziesii (Mirb.) Franco), western hemlock (Tsuga heterophylla Raf. Sarg.), and western redcedar (Thujaplicata Donn ex D. Don) seedlings across four sites in northwestern Oregon, USA. Fertilization increased foliar N concentration of all three species, but above-ground growth of only Douglas-fir and western hemlock. Foliar monoterpene concentrations for western hemlock and western redcedar also increased at higher fertilization rates, while Douglas-fir monoterpene production was not affected by fertilization. Regardless of monoterpene levels, ungulate browse preference was greater for fertilized western hemlock seedlings. The opposite response, however, was observed for western redcedar at two of the four study sites where the likelihood of browse was greater for non-fertilized than fertilized seedlings. Differences in browse preference among species may depend on the type and amount of individual monoterpenes manufactured in response to fertilization. Western redcedar produce α- and β-thujone, oxygenated monoterpenes known to promote gastroenteritis and possibly inhibit microbial rumen activity, which were absent from Douglas-fir or western hemlock. Higher concentrations of α- and β-thujone associated with increasing fertilizer rate provide a plausible explanation as to why ungulates preferred non-fertilized western redcedar. Our results illustrate species-specific adaptation in browse avoidance and selective ungulate browsing behavior of individual trees as linked to foliar chemistry.  相似文献   

19.
Many forests that historically experienced frequent low-intensity wildfires have undergone extensive alterations during the past century. Prescribed fire is now commonly used to restore these fire-adapted forest ecosystems. In this study, we examined the influence of prescribed burn season on levels of tree mortality attributed to prescribed fire effects (direct mortality) and bark beetles (Coleoptera: Curculionidae, Scolytinae) (indirect mortality) in ponderosa pine, Pinusponderosa Dougl. ex Laws., and Jeffrey pine, Pinusjeffreyi Grev. and Balf., forests in California, USA. A total of 816 trees (9.9% of all trees) died during this 3-yr study. Significantly higher levels of tree mortality (all sources) occurred following early and late season burns compared to the untreated control, but no significant difference was observed between burn treatments. The majority (461 trees) of tree deaths were attributed to direct mortality from prescribed burns and was strongly concentrated (391 trees) in the smallest diameter class (<20.2 cm diameter at breast height, dbh). For the largest trees (>50.7 cm dbh), significantly higher levels of tree mortality occurred on early season burns than the untreated control, most of which resulted from indirect mortality attributed to bark beetle attacks, specifically western pine beetle, Dendroctonus brevicomis LeConte, and mountain pine beetle, D. ponderosae Hopkins. Red turpentine beetle, D. valens LeConte, was the most common bark beetle species found colonizing trees, but tree mortality was not attributed to this species. A total of 355 trees (4.3% of all trees) were killed by bark beetles. Dendroctonus brevicomis (67 trees, 18.9%) and D. ponderosae (56 trees, 15.8%), were found colonizing P. ponderosa; and Jeffrey pine beetle, D. jeffreyi Hopkins, was found colonizing P. jeffreyi (seven trees, 2.0%). We also found pine engraver, Ips pini (Say) (137 trees, 38.6%), and, to a much lesser extent, Orthotomicus (=Ips) latidens (LeConte) (85 trees, 23.9%) and emarginate ips, I. emarginatus (LeConte) (3 trees, 0.8%) colonizing P. ponderosa and P. jeffreyi. Few meaningful differences in levels of indirect tree mortality attributed to bark beetle attack were observed between early and late season burns. The incidence of root and root collar pathogens (Leptographium and Sporothrix spp.), including species known to be vectored by bark beetles, was low (18% of trees sampled). The implications of these and other results to management of P. ponderosa and P. jeffreyi forests are discussed in detail.  相似文献   

20.
Chen H  Li J  Wu Q  Niu XT  Tang MT  Guan XL  Li J  Yang RY  Deng SP  Su XJ 《Fitoterapia》2012,83(4):643-649
The extracts from leaves, heartwood, barks and roots of the Streblus asper were investigated for anti-HBV activities, separately. The results suggested that the MeOH extracts of the heartwood, barks, and roots exhibited good anti-HBV activities. Further investigations displayed that ethyl acetate and n-butanol soluble parts of their MeOH extracts showed more significant anti-HBV activities. Moreover, a new lignan, together with 11 known compounds, was isolated from n-butanol-soluble part of MeOH extract of the roots of S. asper. The structures were elucidated by spectroscopic methods, including 1D NMR ((1)H NMR, (13)C NMR), 2D NMR (HMQC, HMBC) and HR-EI-MS experiments. Compounds 1-3 were evaluated for their anti-HBV activities. Honokiol showed significant anti-HBV activity with IC(50) values of 3.14μM and 4.74μM for HBsAg and HBeAg with no cytotoxicity respectively, while lamivudine (3TC, positive control) exhibited weak anti-HBV activity with IC(50) values of 11.81μM and 25.80μM for HBsAg and HBeAg respectively.  相似文献   

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