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1.
Dense hyphal mats formed by ectomycorrhizal (EcM) fungi are prominent features in Douglas-fir forest ecosystems, and have been estimated to cover up to 40% of the soil surface in some forest stands. Two morphotypes of EcM mats have been previously described: rhizomorphic mats, which have thick hyphal rhizomorphs and are found primarily in the organic horizon, and hydrophobic mats, which occur in the mineral horizon and have an ashy appearance. This study surveyed EcM mat and non-mat soils from eight early and late seral conifer forest stands at the H.J. Andrews Experimental Forest in western Oregon. EcM mats were classified by morphology and taxonomic identities were determined by DNA sequencing. A variety of chemical and biochemical properties, including enzymes involved in C, N, and P cycling were measured. Analysis was confined to a comparison of rhizomorphic mats colonizing the organic horizon with non-mat organic soils, and hydrophobic mats with non-mat mineral soils. Both the organic and mineral horizons showed differences between mat and non-mat enzyme profiles when compared on a dry weight basis. In the organic horizon, rhizomorphic mats had greater chitinase activity than non-mat soils; and in the mineral horizon, hydrophobic mats had increased chitinase, phosphatase, and phenoloxidase activity compared to the non-mat soil. The rhizomorphic mats had 2.7 times more oxalate than the non-mats and significantly lower pH. In the mineral horizon, hydrophobic mats had 40 times more oxalate and significantly lower pH than non-mat mineral soils. Microbial biomass C was not significantly different between the rhizomorphic mat and non-mat organic soils. In the mineral horizon, however, the hydrophobic mats had greater microbial biomass C than the non-mat soils. These data demonstrate that soils densely colonized by EcM fungi create a unique soil environment with distinct microbial activities when compared to non-mat forest soils.  相似文献   

2.
We compare forest floor microbial communities in pure plots of four tree species (Thuja plicata, Tsuga heterophylla, Pseudotsuga menziesii, and Picea sitchensis) replicated at three sites on Vancouver Island. Microbial communities were characterised through community level physiological profiles (CLPP), and profiling of phospholipid fatty acids (PLFA).Microbial communities from cedar forest floors had higher potential C utilisation than the other species. The F layer of the forest floor under cedar contained significantly higher bacterial biomass (PLFA) than the F layer under the other three tree species. There were differences in microbial communities among the three sites: Upper Klanawa had the highest bacterial biomass and potential C utilisation; this site also had the highest N availability in the forest floors. Forest floor H layers under hemlock and Douglas-fir contained greater biomass of Gram positive, Gram negative bacteria and actinomycetes than F layers based on PLFA, and H layers under spruce contained greater biomass of Gram negative bacteria than F layers. There were no significant differences in bacterial biomass between forest floor layers under cedar. Fungal biomass displayed opposite trends to bacteria and actinomycetes, being lowest in cedar forest floors, and highest in the F layer and at the site with lowest N availability. There were also differences in community composition among species and sites, with cedar forest floors having a much lower fungal:bacterial ratio than spruce, hemlock and Douglas-fir. The least fertile Sarita Lake site had a much greater fungal:bacterial ratio than the more fertile San Juan and Upper Klanawa sites. Forest floor layer had the greatest effect on microbial community structure and potential function, followed by site, and tree species. The similarity in trends among measures of N availability and microbial communities is further evidence that these techniques provide information on microbial communities that is relevant to N cycling processes in the forest floor.  相似文献   

3.
Influence of ectomycorrhizal mat soils on lignin and cellulose degradation   总被引:3,自引:0,他引:3  
Summary The ectomycorrhizal fungus Hysterangium setchellii (Fisher) forms extensive hyphal mats at the soillitter interface with the roots of the host tree Douglas fir Pseudotsuga menziesii [(Mirb.) Franco]. Microbial biomass, and lignin and cellulose decomposition rates were measured seasonally for 1 year, using 14C techniques in ectomycorrhizal mat soils and adjacent non-mat soils in a second-growth Douglas fir forest. The microbial biomass and cellulose degradation rates were 3–6 times higher in ectomycorrhizal mat soils than in adjacent nonmat soils. Lignin degradation rates were higher in ectomycorrhizal mat soils than adjacent non-mat soils. Our data suggest that the ectomycorrhizal fungus H. setchellii provides a microenvironment with increased microbiological activity which results in faster lignin and cellulose decomposition.  相似文献   

4.
Although soil microorganisms play a central role in the soil processes that determine nutrient availability and productivity of forest ecosystems, we are only beginning to understand how microbial communities are shaped by environmental factors and how the structure and function of soil microbial communities in turn influence rates of key soil processes. Here we compare the structure and function of soil microbial communities in seven mature, undisturbed forest types across a range of regional climates in British Columbia and Alberta, and examine the variation in community composition within forest types. We collected the forest floor fermentation (F) and humus (H) layers and upper 10 cm of mineral soil at 3 sites in each of seven forest types (corresponding to seven Biogeoclimatic zones) in both spring and summer. Phospholipid fatty acid analysis was used to investigate the structure of soil microbial communities and total soil microbial biomass; potential activities of extra-cellular enzymes indicated the functional potential of the soil microbial community in each layer at each site.Multivariate analysis indicated that both structure and enzyme activities of soil microbial communities differed among the forest types, and significantly separated along the regional climate gradient, despite high local variation. Soil moisture and organic matter contents were most closely related to microbial community characteristics. Forests in the Ponderosa Pine and Mountain Hemlock zones were distinct from other forests and from each other when comparing potential enzyme activities and had the most extreme moisture and temperature values. Forest floors from the hot and dry Ponderosa Pine forests were associated with enzymes characteristic of water-stress and high concentrations of phenols and other recalcitrant compounds. The wet and cold Mountain Hemlock forests were associated with low enzyme activity.An influence of tree species was apparent at the three sites within the Coastal Western Hemlock zone; high bacterial:fungal biomass ratios were found under western redcedar (Thuja plicata) which also had high pH and base-cation levels, and under Douglas-fir (Pseudotsuga menziesii), which had high N availability. Potential activities enzymes differed among soil layers: potential activities of phenol oxidase and peroxidase were highest in mineral soil, whereas phosphatase, betaglucosidase, NAGase, sulfatase, xylosidase and cellobiohydrolase were highest in the forest floors.  相似文献   

5.
Following resource extraction by surface mining in the oil sands region of northeastern Alberta, sites are reclaimed by reconstructing soils using a variety of salvaged organic and mineral materials, and planted to native tree species. This study assessed the influence of three distinct stand types (Populus tremuloides Michx., Pinus banksiana Lamb., and Picea glauca (Moench) Voss) on forest floor development (thickness, morphology, total carbon and nitrogen contents), soil organic matter composition, and associated soil microbial communities. Forest floor and top mineral soil (0–5 cm) samples were collected from 32 sites reclaimed 16–33 years ago. Soil organic matter composition was measured using ramped-cross-polarization 13C nuclear magnetic resonance, and microbial communities were characterized using phospholipid fatty acid analysis. Morphological characteristics indicated little mesofaunal or fungal activities within the forest floors. Stands dominated by P. tremuloides fostered more rapid forest floor development than the coniferous (P. banksiana and P. glauca) stands, and showed a significant increase in forest floor thickness with time since reclamation. Within the P. tremuloides stands, forest floor development was accompanied by temporal changes in soil organic matter composition that reflected inputs from the canopy. Soil microbial community composition differed among reclamation treatments of the reconstructed soils, specifically as a function of their subsoil mineral textures, when canopy cover was below 30%. Above 30%, significant differences became apparent among stand types. Taken together, our results document how canopy cover and stand type were both important factors for the reestablishment of plant–soil relationships at these sites. Furthermore, achieving a canopy cover of 30% emerged as a critical threshold point during soil reclamation.  相似文献   

6.
The ability of soil microbial communities to withstand punctual disturbance or chronic stress is important for the stability of ecosystem processes. Factors controlling microbial community composition or soil resource availability should be regarded as potential determinants of this stability. Here, we explored the effects of three stand types (jack pine, aspen and mixed-wood) and two geologic parent materials (clay and till), on the stability of the microbial biomass in the forest floor. We hypothesised that microbial communities in mixed-wood stands or on the clay soil would show greater resistance to, and resilience from, a dry-wet disturbance, and a higher tolerance to incremental additions of HCl or Cu, than microbial communities in mono-specific stands or on the till soil. We also surveyed the understory vegetation, and measured chemical properties and microbial phospholipid fatty acid profiles in the forest floor, so as to gain insights into the factors regulating microbial stability. Microbial resistance to disturbance was found to be higher in mixed-wood than in mono-specific stands. Microbial communities from mixed-wood stands also showed a high tolerance to HCl and Cu stress over both geologic parent materials, as opposed to those in mono-specific stands that showed a high tolerance to stress on only one type of parent material. Some forest floor properties in mixed-wood stands (e.g. Ca on clay, mineralisable N and C/N ratio on till) were more similar to the more productive aspen, than to jack pine stands. Other properties (understory plant communities, pH, actinomycete and arbuscular mycorrhizae) of mixed-wood stands were transitional between those in aspen and jack pine stands, suggesting that both tree species contribute in structuring the forest floor microbial pool in mixed-wood stands. We put forward that this may provide a more diverse capability to resist disturbance and tolerate stress than in mono-specific stands. We found no effect of stand type on microbial resilience to disturbance, but resilience was higher on clay than on till plots. This could be due to a higher fungal/bacterial ratio on till plots, as slower fungal growth rates may hinder resilience, or to lower carbon and nutrient availability limiting the growth rate of resistant microbial cells. We conclude that plant diversity and site productivity are important drivers of forest floor microbial stability in the southern boreal forest of eastern Canada.  相似文献   

7.
《Applied soil ecology》2007,35(3):635-647
Previous studies have shown that forest floors from stands dominated by trembling aspen (ASPEN; Populus tremuloides Michx.) tend to support a greater microbial biomass with a different microbial community structure than forest floors from stands dominated by white spruce (SPRUCE; Picea glauca (Moench) Voss). A reciprocal transfer experiment, in concert with coarse and fine mesh bags that allowed or excluded fine root in-growth, was used to examine how the composition of these forest floor microbial communities respond to changes in belowground inputs from fine roots, aboveground inputs (e.g. from litter and through-fall) and soil microclimatic conditions over 1 year. Neither the microbial biomass nor the microbial community structure (assessed using phospholipid fatty acid analyses and substrate-induced respiration techniques) of forest floors of ASPEN or SPRUCE origin were altered by reciprocal transfer to SPRUCE or ASPEN stands, with or without fine root inputs. Despite the lack of changes in microbial community structure, the stand type during incubation had a strong effect on forest floor moisture content and concentrations of nitrate, while mesh size had a significant effect on forest floor pH and the abundance of mesofauna. Thus, changes in microbial community structure did not co-occur with changes in other characteristics of these forest floors. The resistance of the forest floor microbial communities to change may be a function of the high C contents of these soils. Further treatment effects may have been detected if the study had been extended beyond 1 year. Reciprocal transfer studies using coarse and fine mesh bags allow transferred soils to respond to fluctuations in microclimate, organic inputs and soil biota and, therefore, hold considerable promise for studies examining the influence of disturbances on soil properties.  相似文献   

8.
This study was designed to examine whether or not specific tree species (Picea glauca, Picea mariana, Pinus banksiana, Populus tremuloides), their post-fire stand age, or their position in a successional pathway had any significant effect on the functional diversity of associated soil microbial communities in a typical mixed boreal forest ecosystem (Duck Mountain Provincial Forest, Manitoba, Canada). Multivariate analyses designed to identify significant biotic and/or abiotic variables associated with patterns of organic substrate utilization (assessed using the BIOLOG™ System) revealed the overall similarity in substrate utilization by the soil microbial communities. The five clusters identified differed mainly by their substrate-utilization value rather than by specific substrate utilization. Variability in community functional diversity was not strongly associated to tree species or post-fire stand age; however, redundancy analysis indicated a stronger association between substrate utilization and successional pathway and soil pH. For example, microbial communities associated with the relatively high pH soils of the P. tremuloides-P. glauca successional pathway, exhibited a greater degree of substrate utilization than those associated with the P. banksiana-P. mariana successional pathway and more acidic soils. Differences in functional diversity specific to tree species were not observed and this may have reflected the mixed nature of the forest stands and of their heterogeneous forest floor. In a densely treed, mixed boreal forest ecosystem, great overlap in tree and understory species occur making it difficult to assign a definitive microbial community to any particular tree species. The presence of P. tremuloides in all stand types and post fire stand ages has probably contributed to the large amount of overlap in utilization profiles among soil samples.  相似文献   

9.
To understand nutrient cycling in soils, soil processes and microorganisms need be better characterized. To determine whether specific trophic groups of fungi are associated with soil enzyme activity, we used soil imprinting to guide mm-scale sampling from microsites with high and low phosphatase activities in birch/Douglas-fir stands. Study 1 involved sampling one root window per site at 12 sites of different ages (stands); study 2 was conducted at one of the stem-exclusion stands, at which 5 root windows had been installed. Total fungal and ectomycorrhizal (EM) fungal terminal-restriction fragment length polymorphism (TRFLP) fingerprints differed between high-and low-phosphatase activity microsites at 8 of 12 root windows across 12 sites. Where differences were detected, fewer EM fungi were detected in high-than low-phosphatase activity microsites. Using 5 root windows at one site, next-generation sequencing detected similar fungal communities across microsites, but the ratio of saprotrophic to EM fungal reads was higher in high-phosphatase activity microsites in the two windows that had low EM fungal richness. In windows with differences in fungal communities, both studies indicated that EM fungi were less successful than saprotrophic fungi in colonizing fine-scale, organic matter-rich microsites. Fine-scale sampling linked with in situ detection of enzyme activity revealed relationships between soil fungal communities and phosphatase activity that could not be observed at the scales employed by conventional approaches, thereby contributing to the understanding of fine-scale phosphorus cycling in forest soils.  相似文献   

10.
The rate at which formerly nitrogen loaded forests will return to their natural nitrogen-limited state is of considerable scientific and societal interest. Yet the sensitivity of soil microorganisms to these putative changes is mainly unknown. We report effects on fungal and bacterial communities caused by two decades of chronic nitrogen fertilization and subsequent changes 14 years after termination of nitrogen load. We compare these changes in community composition with those observed in natural nitrogen supply and pH gradients using DNA fingerprinting methods and Sanger sequencing.Soil fungal ITS length-heterogeneity profiles correlated equally well to carbon-to-nitrogen ratios and pH. Sequencing results indicated a clear decrease in the relative abundance of amplicons ascribed to known ectomycorrhizal fungi in both natural and experimental high nitrogen conditions, and a recovery of species in the terminated nitrogen treatment. The dominant sequences in low nitrogen soils were identified as members of Piloderma spp. Terminal restriction fragment length profiles of the bacterial 16S rRNA gene were linked to carbon-to-nitrogen ratios and pH in the natural locations but to soil nitrogen in the nitrogen addition experiment that had low variability in pH. Sequencing revealed the dominance of Acidobacteria and Proteobacteria in all soils but also showed a marked increase in Bacteroidetes in high nitrogen treatment not evident in the natural high nitrogen and high pH environments. Proteobacteria sequences included described strains from high-organic and low-pH systems that are believed be involved in degradation of complex plant material.There were signs of recovery of fungal but not of bacterial communities in the sense that community's in terminated nitrogen addition plots did not differ significantly from those in control plots or from the low nitrogen stands in the natural nitrogen supply gradient. The need of further examination of the seemingly functionally redundant bacterial communities is stressed.  相似文献   

11.
Afforestation and deforestation are key land-use changes across the world, and are considered to be dominant factors controlling ecosystem functioning and biodiversity. However, the responses of soil microbial communities to these land-use changes are not well understood. Because changes in soil microbial abundance and community structure have consequences for nutrient cycling, C-sequestration and long-term sustainability, we investigated impacts of land-use change, age of stand and soil physico-chemical properties on fungal and bacterial communities and their metabolic activities. This study was carried out at four sites in two geographical locations that were afforested on long-established pastures with Pinus radiata D. Don (pine). Two of the sites were on volcanic soils and two on non-volcanic soils and stand age ranged from 5 to 20 y. Microbial communities were analysed by biochemical (phospho-lipid fatty acids; PLFA) and molecular (multiplex-terminal restriction fragment length polymorphism; M-TRFLP) approaches. Both site and stand age influenced microbial properties, with changes being least detectable in the 5-y-old stand. Land use was a key factor influencing soil metabolic activities as measured by physiological profiling using MicroResp. Pasture soils had higher microbial biomass (P < 0.001), and metabolic activities (P < 0.001), and basal respiration rates were up to 2.8-times higher than in the pine soils. Microbial abundance analysis by PLFA showed that the fungal to bacterial ratio was higher in the pine soils (P < 0.01). Community analysis suggested that soil bacterial communities were more responsive to site (principal component 1; P < 0.001) than to land use (principal component 5; P < 0.001). In contrast, the fungal community was more affected by land-use change (principal component 1; P < 0.001) than by site, although site still had some influence on fungal community structure (principal component 2; P < 0.001). Redundancy analysis also suggested that bacterial and fungal communities responded differently to various soil abiotic properties, land-use change and location of sites. Overall, our results indicate that the change in land use from pasture to P. radiata stands had a direct impact on soil fungal communities but an indirect effect, through its effects on soil abiotic properties, on bacterial communities. Most of the changes in bacterial communities could be explained by altered soil physico-chemical properties associated with afforestation of pastures.  相似文献   

12.
The relationship between total and metabolically active soil microbial communities can provide insight into how these communities are impacted by environmental change, which may impact the flow of energy and cycling of nutrients in the future. For example, the anthropogenic release of biologically available N has dramatically increased over the last 150 years, which can alter the processes controlling C storage in terrestrial ecosystems. In a northern hardwood forest ecosystem located in Michigan, USA, nearly 20 years of experimentally increased atmospheric N deposition has reduced forest floor decay and increased soil C storage. A microbial mechanism underlies this response, as compositional changes in the soil microbial community have been concomitantly documented with these biogeochemical changes. Here, we co-extracted DNA and RNA from decaying leaf litter to determine if experimental atmospheric N deposition has lowered the diversity and altered the composition of the whole communities of bacteria and fungi (i.e., DNA-based) and well as its active members (i.e., RNA-based). In our experiment, experimental N deposition did not affect the composition, diversity, or richness of the total forest floor fungal community, but did lower the diversity (−8%), as well as altered the composition of the active fungal community. In contrast, neither the total nor active forest floor bacterial community was significantly affected by experimental N deposition. Our results suggest that future rates of atmospheric N deposition can fundamentally alter the organization of the saprotrophic soil fungal community, key mediators of C cycling in terrestrial environments.  相似文献   

13.
Canopy-held organic matter develops into a distinct soil system separate from the forest floor in wet temperate coniferous forests, creating a natural microcosm. We distinguished between fungal and bacterial components of the decomposer community in one site with Maple (Acer macrophyllum) and one site with Alder (Alnus rubra) by using direct measurements of growth; acetate incorporation into ergosterol, and leucine incorporation for fungi and bacteria, respectively. The higher organic matter content of the canopy soils correlated with higher fungal growth. The relative importance of fungi, indicated by fungal:bacterial growth ratio, was higher in the canopy soil of the Maple site, while there was no difference in the Alder site. The high C:N ratio of the Maple canopy soil likely contributed to this difference. These results demonstrate a divergence between canopy and forest floor that should be explored to gain insights in decomposer ecology using the natural microcosms that the canopy soils provide.  相似文献   

14.
《Applied soil ecology》2007,37(2-3):147-155
A number of studies have reported species specific selection of microbial communities in the rhizosphere by plants. It is hypothesised that plants influence microbial community structure in the rhizosphere through rhizodeposition. We examined to what extent the structure of bacterial and fungal communities in the rhizosphere of grasses is determined by the plant species and different soil types. Three grass species were planted in soil from one site, to identify plant-specific influences on rhizosphere microbial communities. To quantify the soil-specific effects on rhizosphere microbial community structure, we planted one grass species (Lolium perenne L.) into soils from three contrasting sites. Rhizosphere, non-rhizosphere (bulk) and control (non-planted) soil samples were collected at regular intervals, to examine the temporal changes in soil microbial communities. Rhizosphere soil samples were collected from both root bases and root tips, to investigate root associated spatial influences. Both fungal and bacterial communities were analysed by terminal restriction fragment length polymorphism (TRFLP). Both bacterial and fungal communities were influenced by the plant growth but there was no evidence for plant species selection of the soil microbial communities in the rhizosphere of the different grass species. For both fungal and bacterial communities, the major determinant of community structure in rhizospheres was soil type. This observation was confirmed by cloning and sequencing analysis of bacterial communities. In control soils, bacterial composition was dominated by Firmicutes and Actinobacteria but in the rhizosphere samples, the majority of bacteria belonged to Proteobacteria and Acidobacteria. Bacterial community compositions of rhizosphere soils from different plants were similar, indicating only a weak influence of plant species on rhizosphere microbial community structure.  相似文献   

15.
毛竹纯林土壤微生物多样性高于杉木纯林   总被引:2,自引:0,他引:2  
杉木连作障碍现象普遍发生,同为人工林的毛竹则很少发生。作为土壤健康的重要指标,微生物对土壤肥力具有不可忽视的作用。采用高通量测序法对阔叶、毛竹和杉木三种林分的土壤细菌和真菌群落进行研究,结果表明,毛竹林土壤细菌和真菌Shannon多样性和Invsimpson均匀度指数均显著高于杉木林,甚至高于阔叶林;而优势物种多样性Berger-Parker指数则是杉木显著高于毛竹林;毛竹林土壤Actinobacteria门细菌相对丰度高于阔叶林和杉木林、Basidiomycota门真菌相对丰度显著高于阔叶林和杉木林,杉木林土壤Chloroflexi门细菌相对丰度和Mortierellomycota门真菌相对丰度显著高于毛竹林和阔叶林。结合土壤理化性质分析表明,杉木林土壤养分贫瘠是形成其特殊微生物群落的原因之一,而毛竹林土壤丰富的养分和高pH有利于形成良好微生物群落结构。与杉木相比,毛竹林土壤细菌和真菌特征以及土壤理化性质与阔叶的相似度更高。  相似文献   

16.
Monomethyl-mercury is one of the most toxic compounds. Methylation of Hg usually appears under anoxic conditions. In Swiss forest soils, methyl-Hg concentrations of up to 3 μg kg−1 soil dw have been observed, but the impact of methyl-Hg on soil microorganisms have rarely been examined so far. In this study, we investigated the effect of increasing concentrations of methyl-Hg (0, 5, 20, 90 μg kg−1 soil dw) on the microbial communities in various forest soils differing in their physico-chemical properties. Experiments were conducted in microcosms under controlled conditions and the basal respiration (BR), the microbial biomass carbon (MBC) and the bacterial and fungal community structures using T-RFLP-profiling were investigated. BR was significantly affected by methyl-Hg. In general, the BR increased with increasing methyl-Hg concentrations, whereas the MBC was significantly reduced. Bacterial communities were more sensitive to methyl-Hg than fungal communities. In five out of seven soils, the bacterial community structures differed significantly between the treatments whereas the fungal communities did not. The impact of methyl-Hg on the soil bacterial communities was site specific. In one soil, a methyl-Hg concentration of already 5 μg kg−1 soil dw significantly affected the relative abundance of 13% bacterial operational taxonomic units (OTU), whereas in other soils concentrations of even 90 μg kg−1 soil dw rarely affected the abundance of OTUs. In this study, for the first time, the impact of methyl-Hg on soil bacterial and fungal communities in forest soils was assessed. We showed that its impact strongly depends on the physico-chemical conditions of the soil and that bacterial communities were more sensitive to methyl-Hg than fungi.  相似文献   

17.
We aimed to characterize humus macro-morphology and the associated soil microbial community within the unmodified litter (OL), the fragmented and humified layers (FH) and the organo-mineral (A) layer along a beech (Fagus sylvatica L.) forest chronosequence with four stand age-classes (15-, 65-, 95-, 130-yr-old) in Normandy, France. Humus macro-morphology was described with 36 quantitative and semi-quantitative variables. We measured microbial biomass N (Nmic), microbial N quotient (Nmic-to-Nt), fungal ergosterol, bacterial and fungal DNA using 16S and 18S rDNA real-time qPCR and evaluated the potential metabolic profile of heterotrophic bacteria within each soil layer and stand age-class. The log-transform ergosterol/fungal DNA ratio (EFR index) was used as an indicator related to active fungal biomass and the fungal/bacterial (F/B) ratio was calculated from qPCR results. There was a shift from mull (mainly dysmull) to moder humus forms along the chronosequence. While the Nmic did not change significantly, the Nmic-to-Nt decreased along the chronosequence in the OL layer. Ergosterol content increased in FH and A layers and the F/B ratio increased in the FH layer with increasing beech forest age. The EFR index was significantly higher in the OL and A layers of the oldest stands, whereas the highest EFR index in the FH layer occurred in the 15-yr-old stands. The functional diversity of heterotrophic bacteria was greater within OL and FH layers of 130-yr-old stands, but highest in the A layer of 15-yr-old stands while the Average Well Color Development remained stable for all soil layers. We found significant correlations between macro-morphology and microbial variables, especially between FH-based morphology and fungal biomass. Our main results are that beech forest maturation is accompanied by (1) an increase in fungal biomass in the FH layers and, (2) an increase in heterotrophic bacteria functional diversity in the organic layers. We have identified key macro-morphology variables that are good predictors of the structural and functional profile of the soil microbial community during beech forest development.  相似文献   

18.
In boreal forests ericaceous shrubs often dominate the forest floor vegetation. Nitrogen enrichment has been shown to decrease shrub abundance and in this study we explored whether it also affects the root associated fungal communities. Fine roots of Vaccinium myrtillus were collected in a Norway spruce dominated forest and of Vaccinium vitis-idaea in a Scots pine dominated forest. In both forests, nitrogen enrichment was experimentally induced by adding 12.5 and 50 kg N ha−1 yr−1 for 12 (spruce forest) and four (pine forest) years. Based on terminal restriction fragment length polymorphisms, subcloning and sequencing analyses, the root associated fungal communities were examined. We found 93 fungal species including Asco-, Basidio- and Zygo-mycota. In general, the Rhizoscyphus ericae aggregate was the most dominant and this was followed by Herpotrichiellaceae and Sebacina. Ordination analysis revealed that nitrogen enrichment did not change species composition of the fungal communities in neither the spruce nor the pine forest, while fungal community structures were clearly discriminated between the dominant shrub species in each forest. Similarly, no fungal species showed a significant response to nitrogen enrichment. Therefore, nitrogen enrichment appears to have no effect on root associated fungi of understorey dwarf shrubs in boreal forests, while it is clear that spruce and pine forests harbor distinctive communities of these fungi.  相似文献   

19.
A study was conducted at two experimental tree plantations in the Pacific Northwest to assess the roles of bacteria and fungi in nitrogen (N) cycling. Soils from red alder (Alnus rubra) and Douglas-fir (Pseudotsuga menziesii) plots in low- (H.J. Andrews) and high- (Cascade Head) productivity stands were sampled in 2005 and 2006. Fungal:bacterial ratios were determined using phospholipid fatty acid (PLFA) profiles and quantitative (Q)-PCR. Ratios from these two molecular methods were highly correlated and showed that microbial biomass varied significantly between the two experimental sites and to a lesser extent between tree types with fungal:bacterial biomass ratios lower in more N-rich plots. 15N isotope dilution experiments, with ammonium (NH4+) and nitrate (NO3?), were paired with antibiotics that blocked bacterial (bronopol) and fungal (cycloheximide) protein synthesis. This modified isotope dilution technique was used to determine the relative contribution of bacteria and fungi to net N mineralization and gross rates of ammonification and nitrification. When bacterial protein synthesis was blocked NH4+ consumption and nitrification rates decreased in all treatments except for NH4+ consumption in the Douglas-fir plots at H.J. Andrews, suggesting that prokaryotic nitrifiers are a major sink for mineral NH4+ in forest soils with higher N availability. Cycloheximide consistently increased NH4+ consumption, however the trend was not statistically significant. Both antibiotics additions also significantly increased gross ammonification, which may have been due to continued activity of extra- and intracellular enzymes involved in producing NH4+ combined with the inhibition of NH4+ assimilation into proteins. The implication of this result is that microorganisms are likely a major sink for soil dissolved organic N (DON) in soils.  相似文献   

20.
Summary Specialized ectomycorrhizal fungi form dense mats in forest soils that have different enzyme levels, higher respiration rates, more biomass, different soil fauna, and different soil chemistry compared with adjacent soils not obviously colonized by these mats. In this study, mats formed by two genera of fungi collected in three locations were compared with a wide range of measurements. Per cent moisture, pH, chloroform fumigation-flush C, anaerobic N mineralization, exchangeable ammonium, and respiration, N2 fixation, and denitrification rates were compared between soils or litter colonized by ectomycorrhizal mat-forming fungi and adjacent non-mat material. Significant differences were observed between the two genera of mat-forming fungi and also between mats formed primarily in mineral soil and those formed in litter. These differences suggest that different mat-forming fungi perform different functions in forest soils and that these fungi function differently in mineral soil compared with litter.Published as Technical Paper 9496, Oregon Agricultural Experiment Station  相似文献   

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