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1.
A comprehensive characterization of crop germplasm is critical to the optimal improvement of the quality and productivity of crops. Genetic relationships and variability were evaluated among 63 durum wheat landraces from the Mediterranean basin using amplified fragment length polymorphisms (AFLPs) and microsatellites markers. The genetic diversity indices found were comparable to those of other crop species, with average polymorphism information content (PIC) values of 0.24 and 0.70 for AFLP and microsatellites, respectively. The mean number of alleles observed for the microsatellites loci was 9.15. Non-metric multi-dimensional scaling clustered the accessions according to their geographical origin with the landraces from the South shore of the Mediterranean Sea closely related. The results support two dispersal patterns of durum wheat in the Mediterranean basin, one through its north side and a second one through its south side.  相似文献   

2.
Little is known about genetic diversity and geographic origin of wheat landraces from Oman, an ancient area of wheat cultivation. The objectives of this study were to investigate the genetic relationships and levels of diversity of six wheat landraces collected in Oman with a set of 30 evenly distributed SSR markers. The total gene diversity, (HT), conserved in the three durum wheat (Triticum durum desf.) landraces (HT = 0.46) was higher than in the three bread wheat (Triticum aestivum L.) landraces (HT = 0.37), which were similar to Turkish and Mexican bread wheat landraces calculated in previous studies. Genetic variation partitioning (GST) showed that variation was mainly distributed within rather than among the durum (GST = 0.30) and bread wheat (GST = 0.19) landraces. Based on modified Rogers’ distance (MRD), the durum and bread wheat landraces were distinct from each other except for a few individuals according to principal coordinate analysis (PCoA). One bread wheat landrace (Greda) was separated into two distinct sub-populations. A joint cluster analysis with other landraces of worldwide origin revealed that Omani bread wheat landraces were different from other landraces. However, two landraces from Pakistan were grouped somewhat closer to Omani landraces indicating a possible, previously unknown relationship. Implications of these results for future wheat landrace collection, evaluation and conservation are discussed.  相似文献   

3.
In this work gliadin proteins were used to analyse the genetic variability in a sample of the durum wheat Spanish collection conserved at the CRF-INIA. In total 38 different alleles were identified at the loci Gli-A1, Gli-A3, Gli-B5, Gli-B1, Gli-A2 and Gli-B2. All the gliadin loci were polymorphic, possessed large genetic diversity and small and large differentiation within and between varieties, respectively. The Gli-A2 and Gli-B2 loci were the most polymorphic, the most fixed within varieties and the most useful to distinguish among varieties. Alternatively, Gli-B1 locus presented the least genetic variability out of the four main loci Gli-A1, Gli-B1, Gli-A2 and Gli-B2. The Gli-B1 alleles coding for the gliadin γ-45, associated with good quality, had an accumulated frequency of 69.7%, showing that the Spanish germplasm could be a good source for breeding quality. The Spanish landraces studied showed new gliadin alleles not catalogued so far. These new alleles might be associated with specific Spanish environment factors. The large number of new alleles identified also indicates that durum wheat Spanish germplasm is rather unique.  相似文献   

4.
The genetic diversity of durum wheat (Triticum durum Desf.) is held by landraces, which are generally considered to be endemic to a particular region to which they are well adapted. To evaluate the effect of climate in the countries of origin on their agronomic performance, 172 durum wheat landraces from 21 Mediterranean countries were grown in northeastern Spain. Average long-term climatic data of the main wheat-growing areas in each country of origin allowed us to identify four climatic zones in the Mediterranean Basin, steadily varying from warm and dry to cool and wet. The phenology, biomass, and yield of landraces were affected by the climatic zone of origin. The climatic zone accounted for 32.8, 28.3 and 14.5 % of variance for days to anthesis, plant height, and grain filling rate, respectively. The number of days to heading and anthesis steadily increased when moving from the warmest and driest zone of origin to the coldest and wettest one. Landraces collected in the warmest and driest zone had a smaller biomass, a lower chlorophyll content in the flag leaf, more fertile tillers, spikes and grains m?2, a lower grain filling rate, lighter grains, and lower yields than those originated in colder and wetter zones. Landraces collected in countries with high solar radiation showed a shorter cycle until anthesis and smaller height and biomass accumulation, while higher temperatures after anthesis resulted in more tillers and spikes. Landraces from countries with high potential evapotranspiration during grain filling had significantly lower grain filling rates and grain weight.  相似文献   

5.
Results of archaeological studies indicate a millennia-old cultivation history for wheat (Triticum spp.) in Oman. However, in spite of numerous collection surveys and efforts for phenotypic characterization of Omani wheat landraces, no attempts have been made using molecular tools to characterize this germplasm. To fill this gap, 29 microsatellite markers revealing 30 loci were used to study the genetic diversity of 38 tetraploid wheat landrace accessions comprising the species T. dicoccon, T. durum and T. aethiopicum. A total of 219 alleles were detected whereby the number of alleles per locus ranged from 2 to 16 with an average number of 7.1 alleles per locus. The highest number of alleles occurred in the B genome with on average 7.9 alleles per locus as compared to the A genome with 6.5 alleles per locus. Heterogeneity was detected for all microsatellites except for GWM 312, GWM 601 and GWM 192B with an average heterogeneity over all primers and lines of 14.4%. Approximately 10% of the accessions contained rare alleles with an average allele frequency <4%. Gene diversity across microsatellite loci ranged from 0.26 to 0.85. The pairwise comparison of genetic similarity ranged from 0.03 to 0.91 with an average of 0.2. Cluster analysis revealed a clear separation of the two species groups T. dicoccon versus T. durum and T. aethiopicum. Within the species clusters regional patterns of subclustering were observed. Overall, this study confirmed the existence of a surprisingly high amount of genetic diversity in Omani wheat landraces as already concluded from previous morphological analyses and showed that SSR markers can be used for landraces’ analysis and a more detailed diversity evaluation.  相似文献   

6.
The polymorphism of gliadins was studied in 98 Bulgarian durum wheat (Triticum durum Desf.) landraces and classified according to the existing catalogues of blocks of gliadin components. In total, 31 alleles, including 12 new ones, were revealed for five gliadin-coding loci. Nine allele families, which included several alleles coding similar blocks differed only by minor components, were found. The gliadin loci had a high genetic diversity (H = 0.70), and Gli-A2 d was the most polymorphic locus. Significant differences in allele distribution were observed through the Bulgarian region under study. The results made it possible to explain the distribution by historical factors. Presumably, the genetic material flew into the country via two different ways and different durum wheat subgroups contributed to the formation of Bulgarian landraces. The landraces were a result of long-term selection and, probably, had a close association with the history of the human populations of the region.  相似文献   

7.
Durum wheat landrace genotypes are disappearing from the main wheat areas in Jordan, because of spreading of new uniform cultivars and the serious reduction in wheat cultivation. This study was conducted to evaluate genetic diversity in durum wheat landraces from Jordan and to identify desirable agronomic traits. Landraces were collected from two target areas: Ajloun and Karak. The collected material was grown under rainfed conditions using an augmented design with five blocks and four repeated check cultivars. Data were collected for 14 morphological and agronomic traits. Phenotypic diversity index (H′) was estimated, and the relationships among accessions were measured using cluster analysis and dendrogram similarity matrix. The results revealed the presence of a wide range of variability among landraces., which possess high levels of variability for biological yield, fertile tillers, number of seeds per spike, seed weight per spike and weight of 1000 seeds. These landraces must be considered as a reservoir of genes that plant breeders need in their wheat improvement programs and should be conserved both ex situ and in situ.  相似文献   

8.
One hundred lines derived from 14 wheat landraces collected in Mexico were characterized in relation to spike and grain morphology and HMW-glutenin subunit composition. Up to seven botanical varieties were identified among these materials based in four morphological traits. The remaining nine morphological traits showed wide variation. The allelic variation at the Glu-1 loci was wide, although showed a clear risk of genetic erosion due to the low frequency of some alleles. These genotypes could be used as genetic resources to improve important biotic and abiotic traits as well as to widen genetic diversity controlling the HMW glutenin subunit composition of common wheat.  相似文献   

9.
The high molecular weight (HMW) glutenin subunit composition of 111 common landraces of bread wheat collected from Hubei province, China has been determined by sodium dodecyl sulphate polyacrylamide gel electrophoresis (SDS-PAGE). Ninety six of the accessions were homogeneous for HMW glutenin subunit composition and 15 were heterogeneous. For the Glu-1 loci, 16 alleles were detected, 3 at the Glu-A1locus, 9 at the Glu-B1and 4 at the Glu-D1. Three novel alleles were identified, two at the Glu-B1 and one at the Glu-D1locus. Combination of these 16 alleles resulted in 14 different HMW subunit patterns. The distribution of HMW glutenin subunit alleles in a subset of 105 of the 111 accessions representing six populations was assessed both at the individual population and whole population levels. The results demonstrated that the distribution of allelic patterns varied among populations. Taken together, 62.5% of the alleles detected were considered to be rare alleles while the Glu-A1c (null), Glu-B1b (1Bx7 + 1By8) and Glu-D1a (1Dx2 + 1Dy12) alleles were found most frequently in the six populations. The subset exhibited relatively high genetic diversity (A = 5.33, P = 1.00, Ae = 1.352 and He = 0.238) with 81.5% of the diversity being within populations and 18.5% between populations.  相似文献   

10.
Genetic diversity was investigated in 73 accessions of emmer wheat (Triticum dicoccon Schrank) from 11 geographical regions using a set of 29 simple-sequence repeat (SSR or microsatellite) markers, representing at least two markers for each chromosome. The SSR primers amplified a total of 357 different alleles with an average of 12.31 alleles per locus. The number of fragments detected by each primer ranged between 6 (Xgwm1066) and 21 (Xgwm268). Null alleles were detected in nine of the 29 primers used. A high level of gene diversity index was observed. Across the 29 primers, gene diversity ranged from 0.60 (Xgwm46) to 0.94 (Xgwm655), with a mean of 0.82. There was a highly significant correlation (r=0.882; p<0.01) between gene diversity index and the number of loci, showing the number of loci per se is a strong indicator of diversity. Analysis of genetic diversity within and among eleven geographical regions revealed most of the genetic diversity of the total sample resided within regions. The coefficient of gene differentiation (Gst = 0.27) showed that the genetic variation within and among the 11 geographical regions was 73 and 27%, respectively. High value of mean number of alleles per locus was found in Iran (4.86) followed by Morocco (4.10) and Armenia (4.03). On the contrary, lower mean number of alleles per locus was detected in Yemen (2.83). The average gene diversity index across regions ranged from 0.52 (Slovakia) to 0.67 (Morocco) with an average of 0.60. Multivariate techniques of principal component analysis and clustering were employed to examine genetic relationship among the 73 emmer wheat accessions vis-à-vis geographical regions of collections. The genetic distance coefficients for all possible 55 pairs of regional comparisons ranged from 0.63 (between Iran and Armenia, Georgia and Azerbaijan, Georgia and Slovakia) to 0.97 (between Morocco and Yemen, Spain and Georgia, and Turkey and Iran) with a mean of 0.82. From the PCA results, a two dimensional plot of PC1 versus PC2 was constructed. The scatter plot of the first two principal components which explained altogether 27% of the total variation depicted the presence of a clear pattern of geographical differentiation except in few cases like accessions from Caucasian region. Similar pattern of genetic relationships among accessions was observed in cluster analysis. The study provided genetic information of emmer wheat in relation to geographical regions of origin. The information could be utilized in crop improvement, germplasm conservation programs, and in further investigation.  相似文献   

11.
Accurate and reliable means for identification are necessary to assess the discrimination between landraces of tetraploid wheat [T.␣turgidum L. subsp. durum (Desf.) Husn.] and hexaploid wheat (T. aestivum L. em. Thell.). In Afghanistan, farmers usually cultivate mixed landraces, and thus distinction between bread and durum is difficult. A set of 18 microsatellites derived from the DuPont EST-database were used to describe genetic diversity in a sample of 82 Afghan wheat landraces. A total of 101 alleles were detected, with allele number per locus ranging from 2 to 13, and a mean allele number of 6.31. The percentage of polymorphic loci was 89%. The EST-SSRs markers showed different level of gene diversity: the highest Polymorphism Information Content value (0.921) was observed with DuPw 221. Our results demonstrated that with a reasonable number of expressed sequences target microsatellites (EST-SSRs) it is possible to discriminate between T. durum and T. aestivum species of wheat germplasm. Our results showed that EST-databases could be a useful source for species-specific markers and have the potential for new genic microsatellites markers that could enhance screening germplasm in gene banks.  相似文献   

12.
The genetic diversity in a Triticum durum Desf. collection, consisting of 102 Bulgarian landraces, nine Bulgarian and 25 introduced cultivars was studied using 14 highly polymorphic microsatellite markers. A total of 100 alleles were identified, with an average of 7.14 alleles per marker. The gene diversity values (He) of the markers for the total samples ranged from 0.23 (WMS357 and WMS631) to 0.77 (WMS46), with an average of 0.52. Within the landraces that were collected from 18 sites in Southern Bulgaria showed 2–11 alleles per locus with an average of 6.07. The microsatellite analysis suggests that the genetic diversity among landraces is lower compared to the diversity levels for durum wheat in countries close to the main centers of wheat domestication. Breeding activities have caused significant reduction of the allelic polymorphism, elimination of rare alleles, and increase in the number of common alleles and the frequency of dominating alleles.  相似文献   

13.
For millennia, wheat (Triticum spp.) has been grown in traditional aflaj-irrigation systems of remote mountain oases in Oman. However, little is known about the diversity of the ancient landraces used. Given recent reports about the occurrence of novel germplasm in such material, the objective of this study was to evaluate the genetic diversity of hexaploid wheat (Triticum aestivum L.) landraces in relation to their geographic origin using microsatellites. The collection covered most of the cultivation areas in northern Oman where wheat landraces are growing. Total genomic DNA was extracted from six pooled plants representing each accession. A total of 161 wheat accessions were assayed using 35 microsatellite loci in which a total of 305 polymorphic bands were recorded for the 35 microsatellites. The polymorphic information content (PIC) across the 35 microsatellite loci ranged from 0.02 to 0.89 with an average of 0.50. A heterozygosity percentage value of 9.09 was determined and the highest level recorded for accessions from the Batinah district. Rare alleles averaged 1.85 with the highest value being from the Dakhilia district. The results indicated a significant correlation between gene diversity and number of alleles across districts. The correlation coefficient between these two variables over the 35 loci was 0.657, whereby correlation coefficients of 0.718, 0.706, 0.657 and 0.651, respectively, were found for the Batinah, Dhahira, Dakhilia and Sharqia materials. Genetic distances indicated that all landraces were closely related. The cluster analysis discriminated most of the landraces accessions. However, it failed to achieve region-specific groupings of landraces. The present study demonstrated the presence of high diversity in Omani landraces and also indicated the effectiveness of microsatellites to describe it.  相似文献   

14.
Contemporary trends and perspectives of Chinese winter wheat breeding programs were explored using multiple alleles of gliadin (Gli) and glutenin (Glu)-coding loci as genetic markers. To estimate genetic diversity and specific features of Chinese cultivars, the allele frequencies and genetic diversity H in Chinese wheat pool were calculated and compared to those of cultivars from 11 regions of the world. Among all these cultivars the Chinese ones exhibited the highest allelic diversity of the Gli loci while showing relatively low genetic variability for the Glu loci. Most (96%) of the cultivars examined had unique Gli allele compositions, which enabled to differentiate these cultivars with high precision. Cluster analysis of the genetic distances among the wheats from different regions showed that the Chinese cultivars were close to Italian and Russian ones, sharing with them the common Gli alleles. Clustering of modern cultivars and that of cultivars bred 10–15 years ago was essentially the same. All cultivars from all of the countries examined were classified into three groups according to their quality based on their Glu allele compositions. The Chinese cultivars showed a moderate quality score of 7.0, which conforms to the quality evaluation based on SDS sedimentation. This quality proved to be insufficiently high as compared to cultivars from other countries. However, the genetic diversity estimation suggests that Chinese cultivars have a potential for quality improvement.  相似文献   

15.
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16.
The progenies of four intervarietal durum wheat crosses were used to determine the effects of glutenin variants coded at Glu‐1 and Glu‐3 loci on durum wheat quality properties. The F2 lines were analyzed for high molecular weight (HMW) and low molecular weight (LMW) glutenin composition by electrophoresis. Whole grain derived F3 and F4 samples were analyzed for vitreousness, protein, and dry gluten contents, gluten index, SDS sedimentation volume, mixograph, and alveograph properties. Allelic variation at the Glu‐B1 and Glu‐B3 loci affected gluten quality significantly. Comparisons among the Glu‐B3 and Glu‐B1 loci indicated that the LMW glutenin subunits controlled by Glu‐B3 c and j made the largest positive contribution, followed by the alleles a, k, and b. HMW glutenin subunits 14+15 gave larger SDS values and higher mixing development times than subunits 7+8 and 20. The positive effects of the glutenin subunits LMW c and HMW 14+15 were additive. Flour protein content, vitreousness, and mixograph peak height values were positively correlated with each other as well as with Dglut values, whereas the SDS sedimentation highly correlated with mixing development time, alveograph strength, and extensibility but was not correlated with the other parameters. The results of quality analysis, together with the results of the genetic analysis, led to the conclusion that SDS sedimentation, mixograph mixing development time, and peak breakdown are the tests more influenced by allelic variation of prolamin. The uses of the results in durum wheat quality breeding programs are discussed.  相似文献   

17.
Temporal variation of diversity in Italian durum wheat germplasm   总被引：1，自引：0，他引：1  
The aim of this work is to analyse the temporal change of genetic diversity in Italian durum wheat germplasm. The germplasm deployed in this study (158 accessions), belonging to 5 different historical classes, was characterised for its microsatellite and gliadin markers. The level of genetic diversity (He), based on gliadin and SSR markers results – on average – greater in indigenous landraces present in Italy before 1915, with the exception of pure line material which had been selected from landraces (showing highest level of heterozigosity for gliadin markers). Genotypes obtained from crosses or mutagenesis (referring to the 1950–1960 period) along with those resulting from crosses between CIMMYT lines and old materials (1970s and beyond) were also genetically more diverse. Forty-nine percent of indigenous landraces were genetically heterogeneous. Nine out of 53 landrace accessions were able to capture 4 different SSR private alleles. It is speculated that the reduction of allele richness is an indicator of the genetic erosion of the pre-breeding germplasm and it is pointed out that the implementation of appropriate methods of genetic conservation of this germplasm is a priority for breeding and food safety.  相似文献   

18.
This study was undertaken to compare patterns of agronomic characters and yellow pigment content diversity between Iranian durum landraces and modern varieties. In four field experiments, a collection of 127 accessions of landraces and 23 modern cultivars tetraploid wheat representing Iranian and global genetic diversity were tested under optimum and rain-fed conditions. Across the environments, the yellow pigment concentrations ranged from 1.85 mg kg?1 to 8.95 mg kg?1 in the field-grown samples. Multivariate analysis detected five groups, four including landraces and one comprising modern cultivars. As a group, modern cultivars were the most productive and showed high mean values for harvest index, grains per spike and yellow pigment, but they had the lowest plant height. Landraces had the highest mean number of spikes per m2 and 1000-kernel weight, but were characterized by low plant height and yellow pigment content. Clustering analysis also showed that, based on yield and yellow pigment content, the accessions in different groups were of different origins, suggesting that there was no clear relationship between accessions and geographical diversity. According to our results, Iranian landraces can be particularly useful as germplasm in breeding programmes to improve spikes per m2 and 1000-kernel weights.  相似文献   

19.
Wheat endosperm storage proteins, namely gliadins and glutenins, are the major components of gluten. They play an important role in dough properties and in bread making quality in various wheat varieties. In the present study, the different alleles encoded at the 6 glutenin loci and at 3 -gliadin loci were identified from a set of 200 hexaploid wheat cultivars grown primarily in France using SDS PAGE. At Glu-A1, Glu-B1 and Glu-D1, encoding high molecular weight glutenin subunits (HMW-GS), 3, 8 and 5 alleles were observed respectively. Low molecular weight glutenin subunits (LMW-GS) displayed similar polymorphism, as 5 and 11 alleles were identified at loci Glu-A3 and Glu-B3 respectively. Four alleles were observed at Glu-D3 loci. Omega-gliadin diversity was also very high, as 7, 13 and 9 alleles were found at Gli-A1, Gli-B1 and Gli-D1, respectively. A total of 147 (or 149) patterns resulted from the genetic combination of the alleles encoding at the six glutenin loci (or Glu-1 and Gli-1 loci). Although Glu-1 and Glu-3 loci were located on different chromosome arms and were theoretically independent, some associations were revealed due to pedigree relatedness between some French wheat cultivars. The usefulness of allelic identification of LMW-GS together with HMW-GS and gliadins for future genetic and technological wheat improvement is discussed.  相似文献   

20.
The introduction of novel quality characteristics from wheat (Triticum aestivum L.) landraces can enhance the genetic diversity of current wheat breeding programs. The composition of starch and protein in wheat is important when determining the end‐product quality, particularly for white salted noodles (WSN). Quality characteristics that contribute to the production of improved WSN include high starch pasting peak viscosity, low amylose content, high proportion of A‐type granules, low protein content, soft grain texture, and high protein quality as measured by SDS sedimentation volume. A survey of 133 wheat landraces from Afghanistan, China, Egypt, Ethiopia, India, Iran, Syria, and Turkey was conducted to examine the genetic variability of starch and protein quality characteristics. Two wheat cultivars, Rosella and Meering, were used as the quality controls. The variation in starch pasting peak viscosities observed among the wheat landraces had a range of 175–295 Rapid Visco Analyser units (RVU), where 52 of the landraces were not significantly different from Rosella, a commercial soft grain wheat with high pasting properties. The amylose content of the landrace population was 23.4–30.2%, where 17 landraces had significantly lower values than Rosella. The proportion of A‐type granules was 60.5–73.9%, where 112 landraces had significantly higher values than Rosella. The grain texture hardness score was 28.0–99.3, the total protein content was 8.0–15.1%, and the adjusted SDS sedimentation volume (SDS/protein) was 1.6–7.0 mL/%P. The landrace AUS4635 had high starch pasting peak viscosity, high breakdown, low amylose content, low protein content, soft grain texture, and high protein quality flour. This wheat is an ideal parent to use in a breeding program that increases the genetic variation available to develop cultivars with high‐quality WSN characteristics.  相似文献   

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