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1.
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2.
Cacao (Theobroma cacao L.) is the main source for chocolate with an annual production of four million tons worldwide. This Neotropical tree crop was domesticated in Mesoamerica as far back as 3,000 years ago. Knowledge of genetic diversity and population structure in farmer varieties of cacao in the center of domestication is essential for sustainable production of fine-flavored cacao beans and contributes to in situ/on-farm conservation of farmer varieties. Based on 70 single nucleotide polymorphism markers, we analyzed 84 fine-flavored farmer varieties collected from traditional cacao farms in Honduras and Nicaragua. The study also included 31 clones from the international cacao collections to serve as references. The SNP based multilocus matching identified six synonymous groups, including 14 Criollo and two Amelonado varieties. A moderately high level of genetic diversity was observed in these farmer varieties, indicating the possibility to further explore intra-population variation and breed for fine-flavored cocoa. Multivariate analysis showed clustering of the 84 farmer accessions in five genetic groups: ancient Criollo, Amelonado, Trinitario (including Nicaragua Trinitario and Honduras Trinitario) and Upper Amazon Forastero (only one accession). The Honduras Trinitario differed from the Nicaragua Trinitario group. The clustering results largely supported the perceived classification of cacao by local farmers and researchers, which was mainly based on morphological traits. However, the well known traditional variety “Indio” in this region was identified as synonymous with Amelonado. Parentage analysis showed that the variety “Indio” (or Amelonado) contributed more to the Trinitario type farmer varieties, whereas ancient Criollo had less influence. The present study demonstrates the efficacy of using a small set of SNP makers for cacao germplasm characterization, and further depicts the diverse origins and parentage in farmer varieties from Mesoamerica. This information thus will be highly useful for conservation and utilization of cacao germplasm from this region.  相似文献   

3.
The legume pod borer, Helicoverpa armigera (Hübn.), is one of the major constraints to chickpea production, and host plant resistance is an important component for the management of this pest. The levels of resistance in the cultivated chickpea are low to moderate, and therefore, we evaluated 17 accessions of perennial Cicer along with three cultivated chickpea genotypes for resistance to H. armigera. There was a significant reduction in both leaf feeding and larval weights when the larvae were fed on the leaves of Cicer microphyllum Benth. accessions ICC 17146, ICC 17236, ICC 17240, and ICC 17248. Relative resistance index based on leaf feeding, larval survival, and larval weight indicated that C. microphyllum accessions ICC 17146, ICC 17236, ICC 17234, ICC 17240, ICC 17243, and ICC 17248 were highly resistant to H. armigera. Under natural infestation, accessions belonging to C. microphyllum, C. canariense Santos Guerra et Lewis, and C. macracanthum M. Pop suffered a damage rating of <2.0 compared to 4.0 in C. judaicum Boiss. accession ICC 17148 (annual species) and 8.5–9.0 in the cultivated chickpeas (1 = <10% leaf area damaged, and, 9 = >80% leaf area damaged). There was considerable diversity in the accessions belonging to perennial wild species of chickpea, and these can be exploited to increase the levels and diversify the basis of resistance to H. armigera in the cultivated chickpea.  相似文献   

4.
Cacao (Theobroma cacao L.) is an important economic crop in the Bolivian Amazon. Bolivian farmers both cultivate cacao, and extract fruits from wild stands in the Beni River region and in valleys of the Andes foothills. The germplasm group traditionally used is presently referred to as “Cacao Nacional Boliviano” (CNB). Using DNA fingerprinting technology based on microsatellite markers, we genotyped 164 Bolivian cacao accessions, including both cultivated and wild CNB accessions sampled from the Amazonian regions of La Paz and Beni, and compared their SSR profiles with 78 reference Forastero accessions from Amazonian cacao populations, including germplasm from the Ucayali region of Peru. Results of multivariate ordination and analysis of molecular variance show that CNB cacao has a unique genetic profile that is significantly different from the known cacao germplasm groups in South America. The results also show that cultivated CNB and wild CNB populations in the Beni River share a similar genetic profile, suggesting that the cultivated CNB is of indigenous origin in Bolivia. The level of genetic diversity, measured by allele richness and gene diversity in the Bolivian cacao, is moderately high, but was significantly lower than gene diversity in the other Amazonian cacao populations. Significant spatial genetic structure was detected in the wild CNB population, using analysis of autocorrelation (rc = 0.232; P < 0.001) and Mantel tests (Rxy = 0.276; P < 0.001). This finding is also highly valuable to support in situ conservation and sustainable use of CNB genetic diversity in Bolivia.  相似文献   

5.
The identification of seedling resistance to white rust of crucifers was performed in a screening of a B. oleracea core collection with 400 accessions representing the genetic and geographic diversity of the species. Fifty seedlings per accession were tested against the Portuguese isolate Ac502 using the methodology and evaluation procedures developed by and . The percentage of resistant seedlings (%R) and the conventional rating criteria of the mean Disease Index (DI) based on the two different evaluation procedures of disease expression used, were compared and adopted as the criteria to rank the accessions for their interest as sources of resistance. A great variability of reactions was found between and within accessions of the core collection, ranging from complete resistance to full susceptibility. Sources of resistance were found namely among the cauliflowers, broccoli and tronchuda cabbages gene pools. Forty-seven accessions presented at least 20% of resistant seedlings. Nine accessions (the kales INRA18 and INRA62, the cauliflowers HRI4856, HRI4866 and HRI5424, the loose-head cabbage HRI11555, the savoy cabbage BRA848, the black broccoli HRI6318 and the Portuguese tronchuda cabbage ISA207) presented 50–78% of resistant seedlings and so they should be considered as potential and useful sources for direct use in breeding programs for white rust resistance. Fourteen inbred lines, representing the full range of disease expression, derived from resistant accessions of the core collection were also tested for resistance to other two Portuguese isolates (Ac503 and Ac504) and to a UK isolate. The results provided no evidence of differential reaction to the A. candida isolates tested.  相似文献   

6.
A germplasm collection of red clover (Trifolium pratense L.) and seven related species was evaluated in greenhouse tests for resistance to Meloidogyne arenaria (Neal) Chitwood, M. hapla Chitwood, M. incognita (Kofoid & White) Chitwood, and M. Javanica (Treub) Chitwood. Plants were rated for root galling severity and nematode egg production at eight weeks after inoculation with 1500 nematode eggs. A resistance index, RI = (gall2; + egg2;), was generated to assess the plants' reaction to nematode infection as immune, highly resistant, resistant, moderately resistant, intermediate, moderately susceptible, susceptible, or highly susceptible. More than 98% of red clover accessions were intermediately to highly susceptible to all four root-knot nematode species. Only one accession, PI 271627 introduced from India, had a moderate resistance level to the four nematodes tested. About one third of the T. medium accessions were resistant or highly resistant to M. arenaria, M. incognita, and M. javanica whereas more than 50% of the T. alpestre accessions were highly resistant or immune to all four nematodes species. Genetic factors for resistance to root-knot nematode could be introduced into T. pratense through interspecific hybridization with T. medium and/or T. alpestre  相似文献   

7.
Worldwide, a variety of pathogens negatively affect potato production, resulting in an estimated 22% annual yield reduction. Wild Solanum species represent a unique gene pool where all the traits necessary to improve the cultivated potato can be found. Therefore, breeding efforts for improved disease resistance and research aimed at characterizing wild germplasm have been extensively made. In this paper, sources of resistance to Phytophthora infestans, Erwinia carotovora subsp. carotovora, Fusarium solani and Globodera spp. have been investigated in several clones of two Solanum species originating from Central Mexico (S. bulbocastanum and S. cardiophyllum). Interestingly, we found sources of combined resistance to late blight and bacterial soft rot. This is an important finding considering that the development of resistant potato varieties has been hindered by the scarcity of resistant germplasm. In addition, we explored molecular differences within and between the two species generating AFLP fingerprints. By means of six primer pair combinations, we found 13 and 16 putative species-specific AFLP markers for S. bulbocastanum and S. cardiophyllum, respectively, and a bounty of markers useful for mapping, MAS, and cloning purposes. The phenotypic and molecular information associated to S. bulbocastanum and S. cardiophyllum for designing strategies of assisted selection are discussed.  相似文献   

8.
About 90% of chickpea (Cicer arietinum L.) in the world is grown under rainfed conditions where it is subjected to drought and heat stress. Unlike the cultivated chickpea, annual wild Cicer species possess sources of resistance to multiple stress; annual wild Cicer species were therefore evaluated for resistance to drought and heat stress. Eight annual wild Cicer species (Cicer bijugum, C. chorassanicum, C. cuneatum, C. echinospermum, C. judaicum, C. pinnatifidum, C. reticulatum, and C. yamashitae) were compared with special checks, the cvs ICC 4958 and FLIP 87-59C (drought resistant) and ICCV 96029 (very early double-podded). ILC 3279 and 8617 as drought susceptible checks were sown after every 10 test lines. Yield losses due to drought and heat stress in some accessions and susceptible checks (ILC 3279 and ILC 8617) reached 100%. Accessions were evaluated for drought and heat resistance on a 1 (free from drought and heat damage)−9 (100% plant killed from drought and heat) visual scale. Four accessions of C. reticulatum and one accession of C. pinnatifidum were found to be as resistant to drought and heat stress (up to 41.8°C) as the best checks. C. reticulatum should be taken account in short term breeding programs since it can be crossed with the cultivated chickpea.  相似文献   

9.
Downy mildew (Peronospora viciae (Berk) de Bary) is an important disease of vetches (Vicia spp.) in the Mediterranean Region. Narbon and common vetch germplasm accessions originating from different countries, and advanced breeding narbon vetch genotypes, were evaluated for reaction to downy mildew for two seasons under field conditions. In narbon vetch, there were resistant sources from both germplasm accessions and advanced genotypes. From the germplasm accessions, 25 accessions were resistant while from the advanced breeding genotypes, 10 had resistance, with 2–3 ratings. In common vetch, many accessions were highly resistant to downy mildew. These were widely distributed in different countries, mainly Turkey, Italy, Syria and Iran. In general, common vetch had higher sources of resistance than the narbon vetch accessions. These new sources of resistance to downy mildew will be incorporated into the forage legume improvement project in a continuous effort to identify cultivars suitable for replacing fallow in the cereal-based cropping systems.  相似文献   

10.
Lentil anthracnose (Colletotrichum truncatum (Schwein.) Andrus et W.D. Moore is a potential threat in many lentil (Lens culinaris Medik.) production regions of North America. In the lentil germplasm maintained in Germany and North America, 16 lines were reported to have resistance to race Ct1, but none has resistance reported to race Ct0. The objective of this study was to examine accessions of wild Lens species for their resistance to races Ct1 and Ct0 of lentil anthracnose. Five hundred and seventy-four wild accessions of six species and control lines were screened in two replications under both field and greenhouse conditions using a 1–9 scoring scale (1, highly resistant; 2–3, resistant; 4–5, moderately resistant; 6–7, susceptible; and 8–9, highly susceptible). Indianhead and PI 320937 were resistant while Eston and Pardina were susceptible to race Ct1 as expected. However, none of the check lines were resistant to race Ct0. Among the six Lens wild species tested, accessions of Lens ervoides (Brign.) Grande had the highest level of resistance, 3–5 to race Ct1 and Ct0 followed by L. lamottei Czefr. in the field and greenhouse. Lens orientalis (Boiss.), L. odemensis L., L. nigricans (M. Bieb.) Godron and L. tomentosus L. were highly susceptible, 8–9 to race Ct0 in the greenhouse. The highest frequency of resistance, especially in L. ervoides (Brign.) Grande, was found in accessions originating from Syria and Turkey. The usefulness of these L. ervoides (Brign.) Grande accessions as sources of resistance to the more virulent race of anthracnose in a lentil breeding program is discussed.  相似文献   

11.
Lentil is one of the important cool-season food legumes grown in many countries in the Mediterranean region. But a substantial yield loss is observed every year due to various biotic stresses. The Sitona weevil (Sitona crinitus Herbst) is a major insect pest limiting lentil productivity mainly in the countries of West Asia and North Africa region. The adult insects feed on the leaflets at seedling stage, and the plant suffers due to reduced photosynthesis. The larvae feed on the root systems and on the nodules, thus decreasing the ability of the plant to fix atmospheric nitrogen. Since sources of resistance to this pest in the cultivated lentil Lens culinaris Medikus subsp. culinaris are lacking, we searched for resistant sources in a collection of wild Lens species available in the ICARDA Gene Bank. We screened 315 accessions of wild lentil covering all known species/sub-species based on nodule damage at ICARDA’s main experimental station (Tel Hadya, Aleppo), a hot-spot for the pest in the region. Large variation was observed in the percent nodule damage among accessions across species. Eight accessions, ILWL 110, ILWL 136, ILWL 166, ILWL 203, ILWL 207, ILWL 245, ILWL 254 and ILWL 258 were identified as resistant, with ≤10% nodule damage, compared to >56% damage recorded on the cultivated lentil. This is the first report of resistance against Sitona weevil in lentil. One resistant accession ILWL 245 belongs to the species L. culinaris Medikus subsp. orientalis (Boiss.) Ponert, progenitor of the cultivated lentil, which is crossable with the cultivated lentil. This line is being used to introgress resistance genes to cultivated lentil and to understand the inheritance of Sitona weevil resistance.  相似文献   

12.
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13.
Seventy accessions of coriander (Coriandrum sativum L.) were screened for resistance against stem gall, a severe disease caused by Protomyces macrosporus Unger., with the goal to select the resistant cultivars. The accessions PH-7, Pant Haritima, COR-17 and COR-2 were highly resistant. These may be used as the parents to breed high yielding accessions resistant to stem gall disease.  相似文献   

14.
Exploitation of wild gene pool for breeding is a common practice in an increasing number of cultivated plants. The cultivated lentil could not attain the substantial improvement in the yield potential due to loss of genes for higher productivity and lack of resistance against biotic and abiotic stresses. The absence of evaluation data of wild lentils for characters of economic importance, besides biotic and abiotic stresses, is one of the constraints in their use in lentil breeding programme. In the present study, 70 wild accessions from four wild Lens subsp./sp. (L. culinaris subsp. orientalis, L. odomensis, L. ervoides and L. nigricans) along with 3 checks (Precoz, PL-406 and PL-639) were evaluated for phenological and agro-morphological characters, for their reaction to three fungal diseases (wilt, powdery mildew and rust) and screened for tolerance to moisture stress. The wild accessions showed higher performance for branches/plant as compared to cultivated genotypes. Similarly, a few accessions of L. culinaris subsp. orientalis were earlier to flower and had higher seeds and seed yield/plant as compared to cultivated lentil. However, some were comparable with cultivated genotypes for flowers/peduncle, peduncle length and plant height. The mean performance for flowers per peduncle, leaflets per leaf, plant height, seeds and seed yield per plant increased, while decreased for days to flowering and maturity, and branches per plant during the evolution of cultivated lentil from the wild Lens taxa. Of Lens taxa, L. nigricans had the maximum resistant accessions for biotic and tolerance to abiotic stresses. The valuable variation existing among wild accessions can be exploited following introgression with cultivated lentils. It will help in the flow of useful genes from wild to cultivated lentil for generating wide spectrum of variability and its subsequent use in genetic restructuring of lentil.  相似文献   

15.
Seven Brassica species were evaluated for their resistance to the cabbage aphid, Brevicoryne brassicae, in a series of field experiments. Four wild Brassica species, two 8 chromosome species with similarities to the B genome of Brassica nigra (Brassica fruticulosa and Brassica spinescens) and two 9 chromosome species containing the C genome (Brassica incana and Brassica villosa) were identified as possessing consistently high levels of antibiosis mediated resistance to B. brassicae. None of the species were shown to possess consistently high levels of antixenosis resistance. In more detailed glasshouse experiments one B-like genome species, B. fruticulosa, showed considerable variation between accessions collected from different sites for resistance to B. brassicae. In addition, individual accessions of one A genome species (Brassica rapa) and one C genome species (Brassica alboglabra) were shown to be highly variable in their resistance to B. brassicae, some plants of each accession being highly resistant and others very susceptible. The implications of the variability in resistance to B. brassicae within wild Brassica species for exploitation in Brassica breeding programmes are discussed.  相似文献   

16.
Three hundred and fifty three Triticum accessions, several also classified as Aegilops and comprising 13 diploid, tetraploid or hexaploid species, were screened for seedling and adult-plant resistance to Puccinia triticina Eriks. using a mixture of pathotypes UVPrt2, 3, 9 and 13. Seedlings were spray-inoculated with a suspension of freshly collected urediospores in distilled water containing Tween 20® seven days after planting. Infection types (ITs) were scored 10 days post-inoculation (d.p.i.). Fully expanded flag leaves were inoculated and ITs and leaf rust severity were scored 16 d.p.i. One hundred and eighty two of the accessions were resistant to moderately resistant in the adult stage, whereas 126 were resistant or moderately resistant as seedlings to the pathotype mixture. Hypersensitive adult-plant resistance was particularly apparent in lines of T. timopheevii, T. sharonense, T. longissimum, T. searsii and T. turgidum. In T. turgidum, which comprised 272 accessions, approximately 44% of the adult plants were resistant to moderately resistant compared to 28% of the seedlings. The expression of these adult-plant resistances varied between hypersensitive flecking of flag leaves, and small pustules commonly associated with chlorosis and/or necrosis of leaf tissue. Partial resistance, expressed by small pustules without any apparent chlorosis, was observed in species such as T. tauschii, T. turgidum ssp. durum and T. turgidum ssp. pyramidale.  相似文献   

17.
Wild annual Cicer gene pools contain valuable germplasm for chickpea improvement programs. Previous research showed that duplication might exist in accessions collected from these gene pools, which would hinder chickpea breeding and related research. AFLP (amplified fragment length polymorphism) markers were used to fingerprint the world collections of the primary and secondary gene pools including C. reticulatum Lad., C. bijugum K.H. Rech., C. judaicum Boiss. and C. pinnatifidum Jaub. et Sp. Duplicates were detected in a total of 24 accessions in both the gene pools, highlighting the necessity to fingerprint the germplasm. Genotypic difference was detected as gene pool specific, species specific and accession specific AFLP markers. These were developed into fingerprinting keys for accession identification between and within species and gene pools. Use of AFLP markers to detect duplicates and to identify accessions is a reliable method which will assist in the characterisation and use of wild annual Cicer germplasm in chickpea improvement programs. We recommend the procedure presented in this paper as a standard approach for the precise genetic identification and characterisation of future world collections of wild Cicer, to keep germplasm integrity and to benefit chickpea breeding and related research programs.  相似文献   

18.
Pigeonpea [Cajanus cajan (L.) Millsp.] is an important legume crop in South Asia, East and southern Africa, and the Caribbean. Pod fly (Melanagromyza obtusa Malloch) and pod wasp (Tanaostigmodes cajaninae La Salle) are important constraints to increase the production and productivity of pigeonpea under subsistence farming conditions. Host plant-resistance can be used as an important component for the management of these pests, and therefore, we evaluated 28 accessions of wild relatives of pigeonpea for resistance to these pests. There were significant inter- and intra-species differences in the relative susceptibility to pod fly and pod wasp damage. Accessions belonging to Cajanus scarabaeoides (L.) Thouars, C. sericeus (Benth. ex Bak.) van der Maesen, Rhynchosia bracteata Benth. ex Bak., C. acutifolius (F.v. Muell.) van der Maesen, C. lineatus (W. & A.) van der Maesen, and C. albicans (W. & A.) van der Maesen showed resistance to pod fly damage, while those from C. platycarpus (Benth.) van der Maesen, C. cajanifolius (Haines) van der Maesen and R. aurea DC. were susceptible. For the pod wasp, some of the accessions from C. scarabaeoides, C. albicans, Flemingia stricta Roxb., and R. bracteata (Roxb.) Wight showed a resistant reaction, while ICPW 83 belonging to C. scarabaeoides showed a susceptible reaction. ICPW 141, ICPW 278, and ICPW 280 (C. scarabaeoides), ICPW 214 (R. bracteata), ICPW 14 (C. albicans), and ICPW 202 (F. stricta) showed resistance to both pod fly and pod wasp damage. There was considerable variation in accessions belonging to different species for their susceptibility to pod fly and pod wasp, which can be exploited to breed for resistance to these pests. There was a negative association between pod wasp and pod borer damage, and therefore, it is important to keep track of the relative susceptibility of pigeonpea genotypes to pod wasp, while breeding for resistance to pod borers.  相似文献   

19.
A collection of 164 Aegilops tauschii accessions, obtained from Gatersleben, Germany, was screened for reaction to leaf rust under controlled greenhouse conditions. We have also evaluated a selection of synthetic hexaploid wheats, produced by hybridizing Ae. tauschii with tetraploid durum wheats, as well as the first and second generation of hybrids between some of these resistant synthetic hexaploid wheats and susceptible Triticum aestivum cultivars. Eighteen (11%) accessions of Ae. tauschii were resistant to leaf rust among which 1 was immune, 13 were highly resistant and 4 were moderately resistant. Six of the synthetic hexaploid wheats expressed a high level of leaf rust resistance while four exhibited either a reduced or complete susceptibility compared to their corresponding diploid parent. This suppression of resistance at the hexaploid level suggests the presence of suppressor genes in the A and/or B genomes of the T. turgidum parent. Inheritance of leaf rust resistance from the intercrosses with susceptible bread wheats revealed that resistance was dominant over susceptibility. Leaf rust resistance from the three synthetics (syn 101, syn 701 and syn 901) was effectively transmitted as a single dominant gene and one synthetic (syn 301) possessed two different dominant genes for resistance.  相似文献   

20.
Germplasm conserved as seeds in genebanks requires regular regeneration. In this process, selection and genetic drift may cause loss of genetic diversity from accessions. In the case of selfing crops, separation of distinct lines into different accessions may be an efficient strategy to avoid these negative effects. In order to evaluate the applicability of this method for collection management, knowledge about the level of intra-accession genetic diversity is required. By means of AFLP analysis intra-accession variation was investigated in two cultivars, two landraces and two wild populations of ex situ conserved barley germplasm. In the total sample of 216 individuals analysed (36 per accession), 22 genotypes were observed based on 104 polymorphic loci. The number of genotypes detected ranged from 1 to 3 per accession, except for a Nepalese landrace that revealed 12 genotypes. An UPGMA cluster analysis grouped the genotypes unambiguously into the accession they belonged to and genotypes within accessions were generally found to be closely related. In order to determine the repeatability of the results obtained, 11 individuals belonging to 4 genotypes from the Nepalese landrace were scored for a second set of AFLP markers. Matrices of genetic distances calculated for the two AFLP datasets were found to be highly correlated (r = 0.9346, P < 0.001). Separation of genotypes into different accessions was considered a relevant option only for the Nepalese landrace. Analysis of molecular variance indicated that this accession could be well divided into 8 distinct lines. Further implications of the results for genebank practices are discussed.  相似文献   

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