共查询到19条相似文献，搜索用时 171 毫秒
1.
应用ISSR-PCR分析福建水稻纹枯菌的遗传多样性 总被引：5，自引：0，他引：5
本研究应用简单序列重复区间(inter-simple sequence repeats,ISSR)标记技术对福建省10个县市100个水稻纹枯病菌菌株的遗传多样性进行了分析。从16个随机引物中筛选出3个重复性好、特异性高的引物对菌株进行ISSR-PCR扩增,共产生41个ISSR分子标记,其中90.2%的片段具有多态性。PopGene分析结果表明,种群的平均多态位点百分率为55.14%,Shannon表型多样性指数I平均为0.2953,具有较高的遗传多样性;种群间存在着明显的遗传分化(Nei′s信息多样性指数h平均值为0.1991,Gst平均值为0.6423),聚类分析可将它们分成5个遗传聚类群。同时还进行了菌株生长速率和致病力的测定。ISSR遗传聚类组群的划分与菌株的地理来源有明显的相关性,但与菌株的致病力和生长速率都没有明显的相关性。以上结果为进一步开展水稻纹枯病菌群体遗传分析和纹枯病防治提供了一定的理论依据。 相似文献
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利用UP-PCR、ISSR和AFLP标记分析玉米丝黑穗病菌遗传多样性 总被引：3，自引：2，他引：1
利用UP-PCR、ISSR和AFLP分子标记方法研究了我国主要玉米产区34株玉米丝黑穗病菌的遗传多样性。从供试引物中筛选获得具多态性的UP-PCR引物9个、ISSR引物11个和AFLP引物组合22对,分别扩增出113、72和293条谱带,多态性条带比率分别为91.15%、84.7%和83.27%。聚类分析表明,玉米丝黑穗病菌存在丰富的遗传变异,与地理来源无明显相关性。3种分子标记的遗传相似系数矩阵相关性分析表明,UP-PCR与AFLP具有较高的相关性,相关系数为0.698;UP-PCR与ISSR、ISSR与AFLP的相关系数分别为0.659和0.633。从多态性水平、稳定性和可操作性可以看出,UP-PCR技术更适于分析玉米丝黑穗病菌遗传多样性。此外,UP-PCR、ISSR和AFLP标记划分的类群与鉴别寄主划分的致病类型之间存在一定的相关性,吻合率分别为50.0%、60.0%和47.6%。 相似文献
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对30个西瓜枯萎病菌Fusarium oxysporum f.sp.niveum菌株基因组DNA进行相关序列扩增多态性(SRAP)分子标记分析,以探究其遗传多样性与地理来源的关系。采用尖孢镰刀菌西瓜专化型Fusarium oxysporumf.sp.niveum0、1、2号生理小种的基因组DNA为模板,对225对SRAP引物进行筛选,筛选出20对多态性、重复性较好且条带清晰的引物,对30个菌株进行PCR扩增,共扩增出386条带,其中多态性条带有371条,多态性比率为96.11%,平均每对引物扩增出19.3个位点和18.55个多态性位点。UPGMA法聚类分析结果显示,供试菌株两两之间的遗传相似系数范围为0.69~0.90,平均为0.79,说明尖孢镰刀菌西瓜专化型的遗传多样性较为丰富。基于SRAP标记聚类分析表明,30个菌株在遗传相似系数为0.70处被划分为3个类群,I类群包含24个菌株,其中18个来自湖南省,Ⅱ类群只包含1个来自黑龙江省哈尔滨市的菌株,它和另一个来自黑龙江地区的菌株被划分到不同的类群,且遗传距离相对较远;Ⅲ类群包含了5个菌株,其中3个来自海南三亚,其余两个来自湖南省。根据菌株的分布情况来看,菌株的聚集与地理来源没有明显的相关性。 相似文献
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新疆不同地区葡萄霜霉病菌致病性分化及遗传多样性的分析 总被引：1，自引：0，他引：1
为了解新疆不同地区葡萄霜霉病菌Plasmopara viticola的遗传特征,分别采用叶盘接菌法及SSR分子标记技术对采自新疆吐鲁番、阿克苏、石河子等11个不同产区的葡萄霜霉病菌菌株的致病性进行测定,并分析各菌株的遗传多样性。结果显示,来自新疆不同地区的菌株种内存在着致病性分化现象,依据其在鉴别寄主上致病性的差异,将供试菌株划分为强、中、弱3类,其中强致病性菌株为优势菌株,且种间致病性分化与菌株的地理来源无关;SSR标记结果表明,供试菌株之间存在遗传变异现象,并且菌株之间亲缘关系都较近,在相似系数为0.93时,48株菌株聚为4大类,且遗传分化与地理分布具有一定的相关性。研究表明新疆不同地区的葡萄霜霉病菌菌株之间存在致病性分化与遗传变异现象。 相似文献
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为了明确陕西省小麦禾谷镰刀菌混合群(Fusarium graminearum species complex)的遗传多样性,利用4对E coRⅠ和M seⅠ引物对来自陕西省19个区县的162株小麦禾谷镰刀菌菌株进行了AFLP扩增。结果表明,4对引物均能扩增出数量不等的多态性条带,最少的6条,最多的20条,大部分扩增片段在100～750bp之间。利用NTSYS-2.1软件聚类分析表明,不同地区禾谷镰刀菌可分为两大类群,即类群A和类群B。这两大类群的分化和地理来源有明确相关性,类群A主要分布在关中地区,类群B主要分布在陕南地区。初步判断可能与两个地区生态环境和小麦主栽品种差异有关。各类群内的菌系与地理位置间的关系较为复杂,一些菌系与地理来源存在明确关系,而个别菌系与地理来源间的关系尚不能完全明确。还需进一步研究以明确各菌株与地理来源之间的关系。 相似文献
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尖孢镰刀菌及芬芳镰刀菌遗传多样性的ISSR分析 总被引：1，自引：0，他引：1
为了明确镰刀菌属(Fusarium)美丽组（Section Elegans）中尖孢镰刀菌(F. oxysporum)和芬芳镰刀菌（F. redolens）2种菌的遗传差异性和亲缘关系,利用ISSR分子标记技术对这2种菌的35个菌株进行了遗传多样性分析。结果表明,用筛选的15条引物对35个供试菌株共扩增出231条条带,其中多态性条带220条,平均多态性比率为95.2%,平均每条引物产生条带为14.7条。聚类结果和遗传相似系数分析显示,35个菌株间的遗传相似系数范围为0.506~0.935,平均为0.661。在遗传相似系数为0.593时,供试的35株镰刀菌可明显的分成2个ISSR类群（IG）,其中IGⅠ包括1～23号菌株,全部为F. oxysporum;IGⅡ包括24～35号菌株,全部为F. redolens。ISSR类群划分与菌种分类之间存在一定相关性 (IGⅠ中23株F. oxysporum间的平均相似系数为0.720,IGⅡ中12株F. redolens间的平均相似系数为0.717),但与菌株的地理来源不存在相关性。而同一类群中,菌株之间的遗传相似性与菌株的地理来源存在一定的相关性。 相似文献
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采用RAPD-PCR分子标记技术分析了51株不同地理来源、寄主来源的绿僵菌Metarhizium anisopliae菌株的遗传多态性。从94条RAPD引物中筛选出18条引物,对所有试验菌株进行RAPD-PCR扩增,共获得96条扩增片段,其中81条片段表现多态性,占84.1%。聚类分析表明,供试的51株菌株间的相似性系数范围为0.52~0.98,表明菌株间存在丰富的遗传多态性。供试菌株在相似性系数0.7的水平可分为4个组群。按菌株DNA多态性与地理及寄主来源的聚类分析表明,大多数菌株的DNA多态性与地理或寄主有一定的相关性,即长期的地理环境和寄主适应性可能形成了种群的分化。 相似文献
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贵州省烟草黑胫病菌遗传多样性分析 总被引：2，自引：0，他引：2
运用RAPD分子标记技术分析了采自贵州各个地区的38个烟草黑胫病菌株的遗传多样性,探索了贵州省主要烟草种植区间的烟草黑胫病病菌的遗传分化关系.结果表明,受试38个菌株共产生65条谱带.其中多态性为59条,占90.7％.说明贵州省主要烟草种植区的烟草黑胫病病菌具有丰富的遗传多样性,不同地点烟草黑胫病病菌的遗传结构之间都有一定的差异.根据引物扩增的指纹图谱,运用UPGMA分析法,以遗传相似系数0.74,将供试38个菌株划分为9个基因型,发现除少数地区的菌株被划分为同一基因型外,其他不同地理区域的菌株基因型的划分与地理来源没有直接的相关性. 相似文献
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利用ITS序列分析和ISSR分子标记对吉林省玉米主产区的49株寄生亚洲玉米螟的球孢白僵菌进行了遗传多样性分析。ITS序列分析表明,各菌株间的亲缘关系与其地理来源无关。分别根据9个采集地,以及寄主化性类型划分供试菌株类群,利用ISSR分子标记技术进一步分析表明,不同地理类群中榆树地区的遗传多样性最高,双辽地区最低;双辽和通化地区间的遗传分化系数最高,梨树和通化地区间的遗传距离最大。根据寄主化性类型划分类群得出一代玉米螟分离菌株遗传多样性指数最高,一代兼二代区最低;一代兼二代区菌株遗传分化系数最高,而一代区和二代区的遗传距离最大。由此可见,吉林省球孢白僵菌遗传多样性水平较高,种群的异质性较强,遗传多样性同地理位置无关,与寄主化性类型存在相关性。 相似文献
10.
玉米新月弯孢菌(Curvularia lunata)的RAPD分析 总被引：3，自引：1，他引：3
对分离自玉米弯孢菌叶斑病标样中的77株新月弯孢菌和1株来自水稻的新月弯孢菌进行RAPD分析表明,菌株间具有丰富的遗传多样性,在相似系数约0.60处,所有菌株被聚为3个组,但88.0%的菌株聚入第Ⅰ组内,其余菌株被聚入另外2个组内。第Ⅰ组内共有69个菌株,包含来自不同区域的致病性较强的菌株,是玉米弯孢菌叶斑病的优势类群,其余2个类群主要是一些致病能力较弱或不致病的菌株。结果表明,新月弯孢菌种内菌株的遗传多样性与致病性相关,但与菌株地理来源无明显的直接关系。 相似文献
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Pathogenic and genetic variability among Colletotrichum lindemuthianum isolates of different geographic origins 总被引：2，自引：1，他引：2
K. I. Ansari † N. Palacios C. Araya T. Langin D. Egan F. M. Doohan 《Plant pathology》2004,53(5):635-642
The pathogenic and genetic diversity of Colletotrichum lindemuthianum isolates collected from a total of 10 Central and South American, European and African countries were characterized using common bean differential cultivar pathogenicity tests and amplified fragment length polymorphism (AFLP) analysis. On the basis of pathogenicity tests, 74 isolates were attributed to 30 different pathogenic races using the CIAT-defined binary race-classification system. Twenty-one races were restricted geographically, being exclusive to different countries. Race 9 was the most widespread, being detected in four different countries. Cluster analysis of consensus AFLP data generated using three selective AFLP primer combinations grouped 86 isolates (including the 74 subjected to pathogenicity tests) into three clusters (with one isolate as an outlier). This analysis showed that the majority of South and Central American isolates were divided among two clusters, and that the limited number of European and African isolates used in this study were genetically most similar to Central American isolates. Overall, the results of this research showed some associations between the genetic diversity of the isolates and their country of origin, but not between genetic diversity and race classification of isolates. 相似文献
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为分析相同遗传背景下稻瘟病菌致病性变化情况,利用24个水稻单基因系品种为评价体系,通过喷雾接种的方式,对36个以空育163为哺育品种的稻瘟病菌株进行了分析,得出以下结论:1、供试菌株致病力强,对24个抗瘟基因的致病率在36.11%~100%之间,平均致病率77.51%,逐年增强趋势明显。2、供试菌株致病性分化严重,相似系数在0.00~1.00之间,在相似系数0.50水平上,共划分为29个类群,优势类群菌株占总菌株的13.89%。3、24个抗瘟基因对供试菌株抗谱在5.56%~56.48%之间,Pi-km抗谱最窄, Pi-9(t)抗谱最宽;在基因搭配前提下,Pi-9(t)& Pi-12(t)组合和 Pi-9(t)& Pi-11组合效果略好。总体分析,供试菌株致病力和致病性分化都处于较高水平,目前缺少高效抗源加以控制。 相似文献
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Nguyen Thi Ninh Thuan Joseph Bigirimana Ed Roumen Dominique Van Der Straeten Monica Höfte 《European journal of plant pathology / European Foundation for Plant Pathology》2006,114(4):381-396
Rice blast caused by Pyricularia oryzae is a devastating disease worldwide. In Vietnam, rice blast is especially severe in the Red River Delta in the North. The
genetic diversity of 114 P. oryzae isolates collected from rice in 2001 in the Red River Delta and nine additional Vietnamese P. oryzae isolates was analysed using Amplified Fragment Length Polymorphism (AFLP). DNA similarity and cluster analysis based on 160
polymorphic AFLP markers showed twelve different AFLP genetic groups among the 123 field isolates. Isolates collected from
japonica hosts clustered separately from indica host isolates with at least 60% dissimilarity with little evidence for gene flow between the two populations. In the 2001
population originating from indica hosts, three genetic groups were predominant and represented 99% of the isolates sampled. One predominant clonal lineage
represented 59% of the 2001 indica host population and was found in eleven provinces in the Red River Delta of North Vietnam. Significant genotype flow could
be demonstrated between the indica population south of Red river and the indica population north of Red river. There was significant linkage disequilibrium between the AFLP loci within the indica population, indicating that this is not a random mating population. Pathogenicity tests of 25 isolates selected from the
12 AFLP groups on a set of 29 differential rice lines revealed two avirulent isolates and 23 pathotypes. Different combinations
of known resistance genes were found to have potential for blast resistance breeding for North Vietnam.
First two authors contributed equally 相似文献
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ABSTRACT Isolates of Rhizoctonia spp. were obtained from rice in India during 2000-2003. Characterization by conventional techniques and polymerase chain reaction showed that from 110 isolates, 99 were R. solani and 11 were R. oryzae-sativae. Of 99 isolates identified as R. solani, 96 were AG1-IA, 1 was AG1-IB, and 2 were AG1-IC. Amplified fragment length polymorphism (AFLP) analyzes were used to determine genetic relationships in Rhizoctonia pathogen populations collected from different geographic regions. Cluster analysis based on the AFLP data separated isolates belonging to the three different intraspecific groups of R. solani AG1 and differentiated R. solani from R. oryzae-sativae. Analysis of molecular variance (AMOVA) revealed that geographic region was the dominant factor determining population structure of R. solani AG1-1A; host cultivar had no significant effect. Pathogenicity tests on Oryza sativa cv. Zenith revealed that isolates of R. solani AG1-1A and AG1-1B were more virulent than R. solani AG1-IC and R. oryzae-sativae isolates. 相似文献
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ABSTRACT Isolates of Rhizoctonia solani were obtained from plant and soil samples that had been systematically collected in a field experiment in C?te d'Ivoire to study the diversity of the pathogen and the influence of three different rice rotations on the pathogen population. Characterization by morphology, anastomosis testing, pathogenicity testing, and restriction fragment length polymorphisms (RFLPs) of AT-rich DNA (AT-DNA) showed that there were no differences in isolates from different experimental plots, suggesting that the soil as well as the plant population of the fungus was indistinguishable throughout the experiment and was not influenced by crop rotation. Analysis of AT-DNA showed that the isolates obtained from plant material and one from soil shared a distinct banding pattern, identical with the AT-DNA RFLP obtained for the reference strain of anastomosis group 1 (AG-1). The remaining soil isolates produced a consistent RFLP pattern that was distinct from that of the plant isolates. Morphological characterization of isolates produced two major clusters consisting of the same groups of isolates as found by AT-DNA RFLP. Diversity in morphological characters was much higher in plant than in soil isolates and indicated that the population might consist of several clones. Anastomosis testing revealed that soil as well as plant isolates were able to fuse with the tester strain of AG-1. Significant differences in disease severity were observed between the two groups of isolates in pathogenicity tests on rice plants, with plant isolates being distinctively more virulent. 相似文献
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水稻上三种条斑病细菌DNA的多态性初析 总被引：7，自引：0，他引：7
试用40个引物对我国水稻条斑病菌、"稻短条斑病菌"和李氏禾条斑病菌等14个代表菌株进行RAPD分析,其中11个引物的扩增产物表现明显的多态性,共扩增出158条谱带,多态性为89.74%。聚类分析结果显示14个菌株可区分为3个类群,第1群包括LLS2、LLS3、LLS4、RS05、R1008、TAS和TAX;来自不同稻区水稻条斑病菌的群体结构差异明显,分属于第2群(如RS-Hai等)和第3群(如RS105等)。菌株DNA-RAPD指纹分析和致病性测定结果证明:李氏禾条斑病菌、"稻短条斑病菌"在水稻和李氏禾上不仅可相互侵染,而且遗传背景的相似性较高,确认是同一种病菌,其与小麦黑颖病菌亲缘关系较近,但与水稻细菌性条斑病菌具有明显差异。 相似文献