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1.
Echinochloa species are amongst the most problematic weeds in rice fields of Korea. The steady reliance on the Acetyl‐CoA carboxylase (ACCase) and acetolactate synthase inhibiting herbicides for control of these weeds has led to resistance to these herbicides. The objective of this study was to assess the genetic diversity among populations of ACCase inhibitor‐resistant and ‐susceptible Echinochloa crus‐galli and E. oryzicola in Korea, to better understand their population structure and possible origins of resistance. Seven simple sequence repeat markers were applied to assess the genetic diversity between resistant and susceptible E. crus‐galli and E. oryzicola from 12 populations in Korea. Genetic diversity was slightly higher in the resistant group. The Unweighted Pair Group Method using Arithmetic algorithm (UPGMA) dendrogram generated two distinct clades. One clade consisted of Echinochloa spp. from three populations, i.e. Anmyeondo, Gimje 4 and Gongju, which are resistant and differentiated from the susceptible populations, and the other clade contained the rest of the populations. Structure modelling supported two clades of UPGMA clustering. Based on these data, we can infer that some resistant populations are greatly differentiated, whereas other resistant biotypes are still building up resistance in rice fields in Korea. Resistance traits will be fixed and continue to spread over time without proper control measures.  相似文献   

2.
The genus Echinochloa (Poaceae) includes numerous problematic weeds over a wide range of ecoregions in the world. To date, molecular markers for species identification and assessing phylogenetic relationship are still limited in the genus Echinochloa. In this study, we developed seven chloroplast molecular markers based on divergent chloroplast regions of E. crus‐galli and E. oryzicola. Furthermore, Marker #1 (psbA) was examined in more than 200 Echinochloa accessions and a phylogenetic tree grouped these Echinochloa accessions into four clades. Additionally, two different E. crus‐galli varieties (E. crus‐galli var. crus‐galli, E. crus‐galli var. praticola) and E. colona were successfully distinguished by this marker. The developed molecular markers contribute to better identification of Echinochloa taxa.  相似文献   

3.
Echinochloa crus‐galli (L.) Beauv. var. formosensis Ohwi (2n = 6x = 54, AABBCC genomes) and Echinochloa oryzicola (Vasinger) Vasinger (2n = 4x = 36, AABB) are major paddy weeds in East and Southeast Asia. E. oryzicola has been generally considered to be a paternal genome donor of E. crus‐galli s. l., which includes E. crus‐galli var. formosensis based on cpDNA sequences. Thus, molecular characterization using polymerase chain reaction‐restriction fragment length polymorphism analysis of cpDNA has been proposed as a reliable method for discriminating between the two species. In this study, we report that four accessions of E. crus‐galli var. formosensis from Okinawa, Nagasaki, Shizuoka and Tokyo had similar cpDNA sequences to E. oryzicola and had been misidentified as E. oryzicola using molecular methods. In addition, our results demonstrated that these accessions likely inherited their chloroplast genomes from E. oryzicola and not from an anonymous diploid species during polyploidization. Our findings provide new insights into the evolution of E. crus‐galli s. l. and suggest that identification using the cpDNA molecular method alone is not an appropriate approach to differentiate E. crus‐galli var. formosensis and E. oryzicola.  相似文献   

4.
Barnyardgrass, hexaploid Echinochloa crus‐galli, is considered to arise from the hybridization between tetraploid Echinochloa oryzicola and an unknown diploid species. The genetic relationship between E. crus‐galli and E. oryzicola was examined to investigate the position of E. oryzicola in the evolutionary process of E. crus‐galli, based on the nuclear DNA internal transcribed spacer (ITS) and the chloroplast cpDNA trnT‐L, trnL intron, and trnL‐F regions. New World E. crus‐galli was clearly separated from Eurasian E. crus‐galli and showed a close relationship to the American taxa, Echinochloa crus‐pavonis and Echinochloa walteri, in both the ITS and chloroplast DNA. The nrDNA ITS sequences indicated no differentiation between the Eurasian E. crus‐galli and E. oryzicola, in contrast to their clear divergence in the cpDNA sequence. The present results suggest that E. oryzicola is the male donor of E. crus‐galli.  相似文献   

5.
Two major weeds in rice in the Philippines, Sphenochlea zeylanica Gaertn. and Echinochloa crus‐galli (L.) Beauv., are controlled with chemical and cultural methods. In the 1980s, after >10 years of continuous use of 2,4‐D, S. zeylanica evolved resistance to the chemical in those rice fields that had been treated with 2,4‐D once or twice every cropping season. In the 1990s, E. crus‐galli evolved resistance to butachlor and propanil in rice monocrop areas where both herbicides were used continuously for 7–9 years. Rice farmers continue to use 2,4‐D, butachlor and propanil extensively and are often unaware of herbicide resistance or the potential for cross‐resistance, its causes or its implications. In order to control herbicide‐resistant E. crus‐galli, farmers are shifting to locally available herbicides with different modes of action, such as bispyribac, an acetolactate synthase inhibitor, and cyhalofop, an acetyl coenzyme A carboxylase inhibitor. Follow‐up manual weeding or rotary weeding after herbicide spraying, a common farmers’ practice, removes the susceptible and resistant biotypes and could help to delay or prevent the evolution of resistance. Although the resistance mechanisms of both weeds are not determined yet, they could be related to enhanced degradation that is similar to the mechanisms that are shown by the resistant biotypes in other countries.  相似文献   

6.
Barnyardgrass (Echinochloa crus‐galli) proliferation seriously threatens rice production worldwide. Whole‐plant bioassays were conducted in order to test the sensitivity to penoxsulam of 52 barnyardgrass populations and the resistance of six penoxsulam‐resistant populations to 12 other herbicides that are commonly used in rice fields. Among the 48 populations that had escaped penoxsulam control in the rice fields, 8.3% showed a very high level of resistance, 58.3% showed a high level of resistance and 10.4% showed a moderate level of resistance. Multiple resistance was confirmed in all six penoxsulam‐resistant populations that were tested further. They exhibited at least a moderate level of resistance; that is, to 6–10 of the total of 13 herbicides that was tested. Most of the six penoxsulam‐resistant populations showed at least a moderate level of resistance to bispyribac‐sodium, quinclorac, metamifop, cyhalofop‐butyl and oxadiazon, three populations held at least a moderate level of resistance to oxyfluorfen and pretilachlor, two populations also held at least a moderate level of resistance to pyrazosulfuron‐ethyl, pyribenzoxim and fenoxaprop‐P‐ethyl, but the resistance indices of the six populations to pendimethalin were all low. This study has confirmed resistance to pretilachlor and oxadiazon in weeds for the first time.  相似文献   

7.
Echinochloa crus‐galli and Echinochloa muricata are common weeds in Belgian maize fields. Both species are morphologically difficult to distinguish and exhibit high morphological variability. Their response to herbicides varies from field to field. This study investigated whether the considerable morphological polymorphism found among Belgian Echinochloa accessions has a genetic background and whether it is consistently associated with differences in sensitivity to maize herbicides. For this purpose, accessions of E. crus‐galli and E. muricata were compared for morphological and genetic resemblance and tested for herbicide sensitivity. All accessions were planted in the field to examine the morphological traits. A cluster analysis was conducted to assess them for morphological diversity. DNA of leaf material was used for amplified fragment length polymorphism analysis to cluster the accessions genetically. Dose–response pot experiments were conducted in the glasshouse to assess the effectiveness of an acetolactate synthase (nicosulfuron), acetyl‐CoA carboxylase (cycloxydim) and 4‐hydroxyphenyl phosphate dioxygenase (topramezone) inhibiting herbicide. The genetic and morphological clusters were compared with the effective doses obtained from the dose–response bioassays. Morphological variation significantly correlated with genetic variation, but the relation with herbicide sensitivity was weak. Spikelet size and biomass characteristics are reliable discriminating characteristics for (sub)species classification. Intraspecies identification does not seem essential for optimisation of chemical control of E. crus‐galli and E. muricata in the field.  相似文献   

8.
The intensive use of the acetolactate synthase (ALS)‐inhibiting herbicides, imazethapyr, penoxsulam and bispyribac‐sodium, in imidazolinone‐resistant (Clearfield) rice increases the risk of the evolution of ALS‐resistant barnyardgrass. In 2009, imazethapyr failed to control barnyardgrass that was collected from a field in Arkansas, USA, following the failure of the herbicide in 2008. A greenhouse experiment was conducted to confirm and document the level of resistance of the biotype against three ALS‐inhibiting herbicides that currently are labeled in rice. The level of control of the resistant biotype at the labeled rate of bispyribac‐sodium of 35 g ai ha?1 was 10%, penoxsulam at 22 g ai ha?1 was 0% and imazethapyr at 70 g ai ha?1 was 25%. The level of mortality of the susceptible biotype was 100% with all the herbicides at the labeled rate. The dose needed to kill 50% of the resistant plants was 49 g ha?1 of bispyribac‐sodium, 254 g ha?1 of penoxsulam and 170 g ha?1 of imazethapyr. For the susceptible biotype, bispyribac‐sodium at 6 g ha?1, penoxsulam at 10 g ha?1 and imazethapyr at 12 g ha?1 killed 50% of the treated plants. Based on these findings, it was confirmed that a barnyardgrass population has evolved cross‐resistance to three ALS‐inhibiting herbicides in rice culture in Arkansas. Furthermore, an experiment was conducted to determine if the ALS‐resistant biotype could be controlled using other mechanisms of action. The results indicated that propanil, a photosystem II inhibitor, and quinclorac, a synthetic auxin, failed to control the resistant biotype at the labeled rates, whereas all the other evaluated herbicides provided effective control of both biotypes.  相似文献   

9.
The effects of herbicide dose on rice‐weed competition were investigated to develop a combined model, which can be utilised to estimate an optimum herbicide dose for a given weed density in paddy rice cultivation. Field studies were conducted in Suwon for rice‐Echinochloa crus‐galli competition and Iksan for rice‐Eleocharis kuroguwai during 2007. The competitive effect of the weeds E. crus‐galli and E. kuroguwai decreased with increasing doses of flucetosulfuron and azimsulfuron, respectively, in the same manner as the standard dose–response curve. The combination of the rectangular hyperbolic model and the standard dose–response curve adequately described the complex effects of herbicide dose and weed competition on rice yield. Parameter estimates were used with the model to predict rice yield and estimate the doses of flucetosulfuron and azimsulfuron required to restrict rice yield loss caused by E. crus‐galli and E. kuroguwai, respectively, to an acceptable level. For a rice yield of 5.0 t ha?1, the model recommended flucetosulfuron doses of 8.7, 13.4 and 20.1 g a.i. ha?1 when infested with E. crus‐galli at 12, 24 and 48 plants m?2 respectively. For a rice yield of 5.2 t ha?1, the model recommended azimsulfuron doses of 3.9, 7.5 and 12.6 g a.i. ha?1 when infested with E. kuroguwai at 24, 48 and 96 plants m?2 respectively. The theoretical outputs of the combined model appear robust and indicate there are opportunities for reduced herbicide use in the field. These now require evaluation under field conditions.  相似文献   

10.
为明确广东省水稻田杂草稗Echinochloa crus-galli对五氟磺草胺的抗性现状及其可能的抗性机理，采用整株剂量反应法测定不同地区稗种群对五氟磺草胺的抗性水平，对不同稗种群的乙酰乳酸合成酶（acetolactate synthase，ALS）基因片段进行扩增测序，分析细胞色素P450酶（cytochrome P450 monooxygenase，P450）和谷胱甘肽-S-转移酶（glutathione-S-transferase，GST）抑制剂胡椒基丁醚（piperonylbutoxide，PBO）和4-氯-7-硝基-2，1，3-苯并氧杂噁二唑（4-chloro-7-nitro-1，2，3-benzoxadiazole，NBD-Cl）对不同稗种群抗性水平的影响，并对替代药剂进行筛选。结果显示，广东省水稻田多数稗种群对五氟磺草胺仍表现敏感，但采自湛江市的1个种群BC-7对五氟磺草胺产生了抗性，抗性倍数达6.5倍。与敏感种群BC-2相比，BC-7种群并未发生已报道的ALS靶标抗性相关突变。PBO和NBD-Cl均可显著提高BC-7种群对五氟磺草胺的敏感性，其干重抑制中量GR50由31.1 g/hm2分别降为11.0 g/hm2和24.7 g/hm2。BC-7种群对氰氟草酯和噁唑酰草胺仍较敏感，但对二氯喹啉酸和双草醚产生了抗性。表明P450和GST介导的代谢抗性是稗BC-7种群产生抗性的重要原因，氰氟草酯和噁唑酰草胺适用于治理该抗性种群。  相似文献   

11.
Echinochloa oryzicola Vasing. (= Echinochloa phyllopogon Stapf ex Kessenko) is an obligate weed with an elaborated survival strategy in the flooded rice of Japan. In this review various adaptive characters of the weed, which comprise the survival strategy, are discussed through the life cycle. The weed is distributed only in flooded rice. Seeds (spikelets) buried in the soil exhibit annual cycles between dormant and non‐dormant state, and non‐dormant seeds recurrently appear in spring when rice growers start to prepare seedling beds and fields for rice transplanting. The non‐dormant seeds have unique characters metabolically adapted to submerged conditions to germinate and grow by the anaerobic respiration through alcohol fermentation. The weed has seemingly perfect mimicry of the rice plants throughout its development from seedling to heading, by which the weed escapes from manual weeding. In a rice paddy, the weed starts heading coincidentally with the rice plants at the period when the growers are reluctant to walk in the rice paddy to weed. Irrespective of plant height of the rice cultivar, the weed develops a few upper leaves above the rice canopy during the heading period of rice. This phenotypic plasticity of E. oryzicola in plant height is one of the characters conferring its competitive aggressiveness in flooded rice. When weeding is begun again after heading, the dormant weed seeds escape weeding by shattering and join the soil seedbank. The dormant seeds express the gene of an enzyme catalyzing ATP synthesis through the mitochondrial oxidative phosphorylation more abundantly, and have larger oxygen absorption and enzyme activity of the aerobic respiration than the non‐dormant seeds, suggesting that the dormant seeds maintain viability by the conventional aerobic respiration in the paddy soil drained from rice harvesting in fall to the next early spring. The various adaptive characters comprising the survival strategy of E. oryzicola in flooded rice consist of those inherited from the wild progenitor and those selected by the crop cultivation pressure. It is suggested that both the mimicry of the weed and the heading coincident with the rice plants have been acquired by the large selection pressure of frequent weeding, which has been done over the past hundred years. However, today, the manual weeding is substituted with herbicides, which cannot detect the mimicry and heading photoperiodic sensitivity. As a result, the dominant species of Echinochloa weeds in flooded rice is changing from E. oryzicola to Echinochloa crus‐galli var. crus‐galli that has neither mimicry nor photoperiodic sensitivity synchronizing to that of rice, but is more competitive against rice.  相似文献   

12.
Experiments were conducted to (i) evaluate the efficacy of propanil formulations available in Sri Lanka in controlling Echinochloa crus‐galli; (ii) study the seedling growth of propanil‐resistant (R) and ‐susceptible (S) biotypes of the weed under different temperatures; (iii) quantify the level of resistance in R biotypes and; (iv) to suggest alternative control measures for R biotypes. Field studies showed that retail propanil formulations (36% a.i., EC) applied at 2.7 kg a.i. ha?1 gave less than 30% control of E. crus‐galli collected from several locations of the north dry zone of Sri Lanka. Chemical analysis revealed that there was no adulteration of propanil formulations at the retailer level. Growth studies conducted in controlled environments indicated that per cent germination and seedling growth of R and S biotypes were similar at the day/night temperature regimes imposed. However, per cent germination for plants grown under a 34/31°C (day/night) regime was 27–29% higher compared to those grown at 28/24°C. At the higher temperature regime, R and S biotypes reached the 2–3 leaf stage five days earlier, and the 4–5 leaf stage seven days earlier. The ED50 values from the dose–response experiments indicated that the R biotype was four times more resistant to propanil than susceptible ones. The resistance index (RI) did not vary significantly under different temperature regimes. Quinclorac (25% a.i., SC) applied at 200 g a.i. ha?1 and bispyribac‐sodium (10% a.i., SC) applied at 30 g a.i. ha?1 (recommended dosages) successfully controlled propanil‐resistant biotypes of E. crus‐galli. Conversely, oxadiazon and propanil (8% and 23% a.i., EC, respectively) applied at 280 + 805 g a.i. ha?1 did not result in satisfactory control.  相似文献   

13.
G Li  S G Wu  R X Yu  T Cang  L P Chen  X P Zhao  L M Cai  C X Wu 《Weed Research》2013,53(5):314-321
Plant glutathione S‐transferase (GST) forms a major part of the herbicide detoxification enzyme network in plants. A GST cDNA was isolated from Echinochloa crus‐galli and characterised. The gene, designated EcGST1 (E. crus‐galli GeneBank no: JX518596 ), has a 684 bp open reading frame predicted to encode a 25 kD protein. Sequence alignment showed that EcGST1 is a GST homologue. Its expression in response to quinclorac treatment was monitored in seedlings (leaves and roots) and adult plants (leaves, roots, stems and seeds) of quinclorac‐resistant (R) and susceptible (S) biotypes of E. crus‐galli. EcGST1 expression was 1.5–3 times greater in the R plants than in the S plants. However, after exposure to quinclorac, the difference in the expression levels of EcGST1 in R plants, compared with S plants, increased to a ratio of 6–10. Enhanced EcGST1 levels should enable greater quinclorac detoxification following quinclorac stimulation in R plants. GST‐based metabolism may be partially responsible for resistance to quinclorac in E. crus‐galli. The results suggest a new resistance mechanism for this R biotype in Chinese rice fields.  相似文献   

14.
为明确东北稻区稻稗Echinochloa oryzoides HJHL-715种群对五氟磺草胺的抗性水平及抗性机制,采用整株生物测定法测定稻稗种群对五氟磺草胺的敏感性,明确抗性种群的交互抗性和多抗性情况,研究3种细胞色素P450抑制剂对其敏感性的影响;并应用分子生物学方法进行稻稗的乙酰乳酸合酶(acetolactate synthase,ALS)离体活性测定、ALS基因序列分析及其表达量测定。结果表明:在东北稻区,五氟磺草胺对稻稗HJHL-715种群鲜重的抑制中剂量GR50为62.53 g/hm^2;稻稗HJHL-715的ALS基因序列中未发现氨基酸突变,其ALS离体活性与敏感种群的ALS离体活性无显著性差异,ALS基因表达量显著低于敏感种群。1-氨基苯并三唑(1-aminobenzotriazole,ABT)、胡椒基丁醚(piperomyl butoxide,PBO)、马拉硫磷3种P450抑制剂显著提高了稻稗HJHL-715种群对五氟磺草胺的敏感性,使其对五氟磺草胺的GR50由原来的62.53 g/hm^2分别下降到5.78、5.02、3.53 g/hm^2。表明东北稻区已经出现了对五氟磺草胺具有高水平抗性的稻稗种群,稻稗HJHL-715种群对五氟磺草胺的抗性很可能是由细胞色素P450介导的代谢增强所致。  相似文献   

15.
Ten accessions of sulfonylurea‐resistant Schoenoplectus juncoides were collected from paddy fields in Japan. In order to characterize acetolactate synthase from sulfonylurea‐resistant S. juncoides, acetolactate synthase amino acid substitutions, whole‐plant growth inhibition and acetolactate synthase enzyme inhibition were examined. Schoenoplectus juncoides has two acetolactate synthase genes (ALS1 and ALS2). The sulfonylurea‐resistant accessions harbored amino acid substitutions at Pro197 or Trp574 in either ALS1 or ALS2 (the amino acid number is standardized to the Arabidopsis thaliana sequence). The whole plants of all the sulfonylurea‐resistant accessions showed resistance to imazosulfuron. The resistance level depended on the altered amino acid residues in acetolactate synthase. The acetolactate synthase enzyme that was partially purified from all the sulfonylurea‐resistant accessions was less sensitive to imazosulfuron, compared to the susceptible accession, suggesting that the resistance is related to the altered acetolactate synthase enzyme. In addition, the concentration–response inhibition of acetolactate synthase activity by imazosulfuron in the sulfonylurea‐resistant accessions was remarkably different with the presence of an amino acid substitution in either ALS1 or ALS2. Furthermore, the concentration–response inhibition of acetolactate synthase activity in the sulfonylurea‐resistant accessions with a P197S, P197T or W574L mutation showed a double‐sigmoid curve. The regression analysis of enzyme inhibition suggested that the abundance ratio of ALS1 to ALS2 enzymes was approximately 70:30%, with a range of ±15%. Taken together, these results suggest that the resistance of sulfonylurea‐resistant accessions of S. juncoides is related to altered acetolactate synthase in either ALS1 or ALS2, although the abundance of the altered acetolactate synthase in the plants is different among the sulfonylurea‐resistant accessions.  相似文献   

16.
Laboratory experiments were conducted to analyze the iron (Fe) tolerance of paddy weeds and rice varieties (Oryza sativa) for germination and root elongation. Under a waterlogged soil condition, the Fe(II) content in a soil solution increased with an increase in the ratio of rice straw to the soil. In the presence of 0.9% (w/w) straw to soil, which corresponds approximately to 8 t of straw applied to an area of 1 ha × 10 cm depth in the field, ～80 mg L?1 of Fe(II) was produced in the soil solution. Based on this result, the seeds of rice and the weeds were incubated in a solution with <100 mg L?1 of Fe(II). The presence of 100 mg L?1 of Fe(II) suppressed the germination of Echinochloa crus‐galli var. crus‐galli, Cyperus serotinus, Cyperus difformis, and Monochoria korsakowii. However, it had no effect on the germination of Echinochloa oryzicola, Schoenoplectus juncoides (= Scirpus juncoides var. ohwianus), and Monochoria vaginalis. This level of Fe tolerance was the same as that of rice. These findings suggest that E. oryzicola, S. juncoides, and M. vaginalis can grow under more severe conditions than E. crus‐galli, C. serotinus, C. difformis, and M. korsakowii. In relation to seminal root elongation, the order of tolerance of Fe toxicity was O. sativa cv. Dunghan Shali > O. sativa cv. Hoshinoyume > E. oryzicola > M. vaginalis > S. juncoides. Thus, the results show that the tolerance of rice is greater than that of E. oryzicola, which had a comparatively strong tolerance among the weeds examined, and also that there are differences in tolerance among the rice varieties. These findings suggest that the difference in Fe tolerance is involved in weed control systems when organic materials are applied. If this difference is an important factor in the weed control system, Fe‐tolerant rice varieties, like cv. D. Shali, could facilitate weed control systems due to their higher Fe tolerance ability.  相似文献   

17.
J Y Li  X K Guo  Q Zhang  C H Liu  Z H Lin  Z M Yu  H Wu  H B He 《Weed Research》2015,55(5):441-448
Screening crop accessions for allelopathic activity is of paramount importance for crop allelopathy research. Previous bioassays often did not use a mixed culture of donor and target plants, did not use soil and were not conducted under natural conditions. In this study, we designed an inhibitory‐circle method in which a rice accession (donor plant) and Echinochloa crus‐galli (target plant) were cultured together in paddy soil under natural conditions. First, we determined that the highest allelopathic activity of allelopathic rice accession PI312777 was at the 5‐leaf stage, and the suitable distance of rice seedlings and E. crus‐galli was 12 cm apart. This method was then validated by a field test. A further 40 rice accessions were evaluated for allelopathic activity to E. crus‐galli using this method. Two rice accessions, PI312777 and Taichung Native 1, had highly allelopathic activity to E. crus‐galli (inhibitory rate > 50%), while another accession, Lemont, had non‐allelopathic activity. These experimental results were in accordance with previous studies using direct field experiments. The inhibitory‐circle method integrated three necessary conditions, that is donor and target plants grown together, with soil as the medium and under natural conditions for reliable results. The ‘inhibitory‐circle method’, which combined donor and target plants, soil medium and field conditions, can give reliable results in one step, compared with laboratory screening methods. Also, the ‘inhibitory‐circle method’ gave results in 30‐35 days, thereby substantially reducing the requirements for time, labour and cost.  相似文献   

18.
Abstract

Two morphological variants of Echinochloa crus‐galli were collected from rice fields of an area in Greece where rice has been grown for over a decade and growers have recently been complaining about reduced effectiveness of propanil. Seedling response of the two variants to propanil was compared with that of E. crus‐galli collected from vegetable fields in another area where rice has never been grown. Initial contact toxicity of propanil was similar in all collections. Growth inhibition thereafter was clearly different, resulting in death of the E. crus‐galli from vegetables but not of the E. crus‐galli from rice. The latter could overcome initial toxicity and resume growth at 8 kg/ha of propanil, whereas the former was killed at 2–4 kg/ha. Prevalence of E. crus‐galli forms of higher tolerance resulting from selection through rice husbandry and/or repeated use of propanil may account for the reduced effectiveness of propanil in the area of intensive rice growing.  相似文献   

19.
Echinochloa crus‐galli is a serious weed worldwide. Microsatellite markers (simple sequence repeats, SSRs) are important molecular markers that are used widely for studying genetic diversity in plants. However, a limited number of SSRs is available for E. crus‐galli. The restriction site‐associated DNA (RAD) sequencing approach was combined with Illumina DNA sequencing for the rapid and mass detection of SSRs in E. crus‐galli. The RAD tags were generated from the genomic DNA of E. crus‐galli and were sequenced in order to produce 6921.6 Mb of high‐quality sequences with 45.1% guanine–cytosine content. In total, 3081 putative SSRs were detected, of which 82.2% were dinucleotide motif‐repeats. AT was the most frequent motif, accounting for 35.0% of the SSRs. In order to test the validity of the SSRs that were developed here, eight SSRs that were selected from putative SSRs were used to study the genetic diversity and structures of 20 E. crus‐galli populations that had been collected from rice fields in eastern China. Ninety‐seven alleles were amplified from the eight microsatellite loci among the 20 E. crus‐galli populations. These populations showed low genetic diversity and were classified on the basis of their genetic structures into three distinct groups that corresponded to the three regions of population sampling. The SSRs that were identified in this study represent a valuable resource for studying the genetic diversity, population biology and evolution of E. crus‐galli.  相似文献   

20.
Sagittaria trifolia L. is one of the most serious weeds in paddy fields in Japan. Since the late 1990s, severe infestations of S. trifolia have occurred following applications of sulfonylurea herbicides in Akita prefecture. In this study, two accessions of S. trifolia, R1 and R2, were collected from paddy fields with severe infestations and their resistance profiles were determined in comparison to a susceptible accession, S1. R1 and R2 were highly resistant to bensulfuron‐methyl. R1 was also highly resistant to pyrazosulfuron‐ethyl, but R2 was susceptible. Relative to S1, R1 had an amino acid substitution at the Pro197 residue of acetolactate synthase (ALS), a well‐known mutation that confers sulfonylurea resistance, suggesting that R1 has a target‐site‐based resistance (TSR) mechanism. The sequence of the ALS gene in R2 was identical to that in S1. A Southern blot analysis indicated that there was only one copy of the ALS gene in S1 and R2. These results suggest that R2 has a non‐target‐site‐based resistance (NTSR) mechanism. R2 was moderately resistant to imazosulfuron but susceptible to thifensulfuron‐methyl. R2 and S1 were susceptible to pretilachlor, benfuresate, MCPA‐ethyl and bentazon. The results reveal the occurrence of two sulfonylurea‐resistant biotypes of S. trifolia that show different mechanisms of cross‐resistance to sulfonylureas related to TSR in R1 and NTSR in R2.  相似文献   

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