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1.
An understanding of the types of interactions that take place between plant pathogens and other microorganisms in the natural environment is crucial in order to identify new potential biocontrol agents. The use of microorganisms labelled with stable isotopes is a potentially useful method for studying direct parasitisation of a given pathogen or assimilation of the pathogen's metabolites by microorganisms. A microorganism labelled with a stable isotope can be monitored in the environment and isotope ratio mass spectrometry can detect whether it is directly parasitised or its metabolites are used by other microorganisms. In this study, we isolated 158 different species of fungi and bacteria from soil and assayed their biocontrol potential against a plant pathogen (Armillaria mellea) by coupling a dual-culture test with mass spectrometry analysis of the 13C isotope in the microorganisms in presence of 13C-labelled A. mellea. The microorganisms affected the pathogen by means of antibiosis phenomena (total or partial inhibition of pathogen growth, alteration of its morphology) and by antagonism, probably resulting from competition for space and nutrients or from mycoparasitism. Isotope ratio mass spectrometry was used to identify direct trophic interactions between microorganisms and the pathogen as in dual cultures as in soil microcosms. Six fungi and one bacterium were found to display the best active trophic behaviour against the pathogenin dual cultures; three microorganisms were discarded due to their plant pathogen potential. Trichoderma harzianum, Pseudomonas fluorescens and Rhodosporidium babjevae were selected to carry out the experiments. T. harzianum inhibited pathogen development (rate of inhibition 80 ± 0.19%) and its δ 13C values increased (244.03 ± 36.70‰) in contact with 13C-labelled A. mellea. Lower levels of antagonism and correspondingly lower assimilation of 13C were detected in P. fluorescens and R. babjevae. Only T. harzianum maintained mycoparasitic activity in the soil microcosm, showing a δ 13C value of 1.97 ± 2.24‰ after one month in co-presence with the labelled pathogen. This study provides support for the use of isotope ratio mass spectrometry as an additional tool in screening for potential biocontrol agents.  相似文献   

2.
《Applied soil ecology》2011,47(3):355-371
Secondary succession of nematodes was studied in 1–48-year-old abandoned fields on cambisols in South Bohemia, Czech Republic, and compared with cultivated field and sub-climax oak forests. Bacterivores were the predominant group in the cultivated field whereas in forests root-fungal feeders (mainly Filenchus) were almost as abundant as bacterivores. The total abundance of nematodes in the cultivated field averaged 868 × 103 ind m−2. During the first three years of succession the abundance practically did not change (775 × 103 ind m−2), the fauna was still similar to that in cultivated field but the biomass increased mainly due to Aporcelaimellus. Then the abundance increased up to 3731 × 103 ind m−2 in 7–8-year-old abandoned fields, plant parasites (Helicotylenchus) dominated and the fungal-based decomposition channel was activated. Later the abundance stabilised at between 1086 and 1478 × 103 ind m−2 in 13–25-year-old successional meadow stages with high population densities of omnivores and predators. The total abundance of nematodes was low in the 12–13-year-old willow shrub stage (594 × 103 ind m−2), increased in the 35–48-year-old birch shrub stage (1760 × 103 ind m−2) and the nematode fauna developed towards a forest community. The diversity and maturity of nematode communities generally increased with the age of abandoned fields but the highest values were in meadow stages (81–113 species, 57–68 genera, MI 2.73–3.30). The development of meadow arrested succession towards forests or diverted succession towards a waterlogged ecosystem. The succession of nematodes was influenced by the method of field abandonment (bare soil vs. legume cover, mowing) that affected the formation of either a shrub or meadow stage, and by the soil water status. The composition of the nematode fauna indicated that the soil food web could recover faster from agricultural disturbance under successive meadows than under shrubs.  相似文献   

3.
A real-time PCR assay was developed to quantify in soil the fungus Hirsutella minnesotensis, an important parasite of secondary-stage juvenile (J2) of the soybean cyst nematode. A primer pair 5′-GGGAGGCCCGGTGGA-3′ and 5′-TGATCCGAGGTCAACTTCTGAA-3′ and a TaqMan probe 5′-CGTCCGCCGTAAAACGCCCAAC-3′ were designed based on the sequence of the ITS region of the rRNA gene. The primers were highly species-specific. The PCR reaction system was very sensitive and able to detect as few as 4 conidia g?1 soil. Regression analysis showed similar slopes and efficiency on DNA from pure culture (y = ?3.587x + 41.017, R2 = 0.9971, E = 0.9055) and from Log conidia g?1 soil (y = ?3.855x + 37.669, R2 = 0.9139, E = 0.8172), indicating that the real-time PCR protocol can reliably quantify H. minnesotensis in the soil. The real-time PCR assay was applied to 20 soil samples from soybean fields, and compared with a parasitism assay. The real-time PCR assay detected H. minnesotensis in six of the soils, whereas the parasitism assay detected H. minnesotensis in the same six soils and three additional soils. The real-time PCR assay was weakly correlated (R2 = 0.49) with the percentage of parasitized J2 in the six soils, indicating that different types of soil may interfere the efficiency of the real-time PCR assay, possibly due to the effect of soil types on efficacy of DNA extraction. The parasitism assay appeared to be more sensitive than real-time PCR in detecting presence of H. minnesotensis, but real-time PCR was much faster and less costly and provided a direct assessment of fungal biomass. Using the two assays in combination can obtain more complete information about the fungus in soil than either assay alone. Hirsutella parasitism was widespread and detected in 13 of the 20 field soils, indicating that these fungi may contribute to suppressiveness of soybean cyst nematode in nature and likely have high biological control potential for the nematode.  相似文献   

4.
《Applied soil ecology》2000,14(2):177-182
Pine sawdust (9 kg m−2) was ploughed into soils, intended for future forestry plantations, that had been left for 3 or 6 years after previously being used for agriculture. Two years after the amendment, soil pH had changed in both sites and the C:N ratio had increased. Total fungal populations decreased after the treatment. A small decrease in the number of species was not statistically significant. Trichoderma harzianum, an important biological control fungus, increased considerably after sawdust application whilst some fungi, such as Penicillium spp., Pseudogymnascus roseus and partially Mucorales decreased. The practical implications of the increase in T. harzianum density for the health of the young forests are discussed.  相似文献   

5.
《Applied soil ecology》2001,16(1):23-34
The succession of soil nematodes from initial planting with Pinus sylvestris seedling to about 30-year-old pine plantations on coal mining sands in the Lusatian lignite-mining district near Cottbus (Germany) was studied and compared with the nematode fauna of a 40-year-old semi-natural pine forest on naturally formed sandy soil. The initial stage was primarily characterised by a very low abundance (20×103 individuals/m2), which increased over a period of two years to values common in older pine plantations (500–600×103 individuals/m2). In the semi-natural forest the mean abundance of nematodes was about 1300×103 individuals/m2. Populations of Tardigrada, Rotifera and Enchytraeidae also increased with stand age. Nematode biomass increased from 49 to 543 mg m−2 in pine plantations and slightly decreased in the semi-natural forest to 301 mg m−2 over the period of investigation. The early colonisation of the initial stage was by bacterivorous (Acrobeloides) and fungal feeding (Aphelenchoides) nematodes, but the communities diversified as succession progressed with bacterivorous nematodes of the genera Plectus, Wilsonema and Metateratocephalus, root-fungal feeding Filenchus, omnivorous Aporcelaimellus and Eudorylaimus, and predacious Prionchulus becoming abundant. The abundance of plant-parasitic nematodes was very low. The greatest number of nematode genera was found in the semi-natural forest.  相似文献   

6.
Soil-dwelling insect herbivores are significant pests in many managed ecosystems. Because eggs and larvae are difficult to observe, mathematical models have been developed to predict life-cycle events occurring in the soil. To date, these models have incorporated very little empirical information about how soil and drought conditions interact to shape these processes. This study investigated how soil temperature (10, 15, 20 and 25 °C), water content (0.02 (air dried), 0.10 and 0.25 g g?1) and pH (5, 7 and 9) interactively affected egg hatching and early larval lifespan of the clover root weevil (Sitona lepidus Gyllenhal, Coleoptera: Curculionidae). Eggs developed over 3.5 times faster at 25 °C compared with 10 °C (hatching after 40.1 and 11.5 days, respectively). The effect of drought on S. lepidus eggs was investigated by exposing eggs to drought conditions before wetting the soil (2–12 days later) at four temperatures. No eggs hatched in dry soil, suggesting that S. lepidus eggs require water to remain viable. Eggs hatched significantly sooner in slightly acidic soil (pH 5) compared with soils with higher pH values. There was also a significant interaction between soil temperature, pH and soil water content. Egg viability was significantly reduced by exposure to drought. When exposed to 2–6 days of drought, egg viability was 80–100% at all temperatures but fell to 50% after 12 days exposure at 10 °C and did not hatch at all at 20 °C and above. Drought exposure also increased hatching time of viable eggs. The effects of soil conditions on unfed larvae were less influential, except for soil temperature which significantly reduced larval longevity by 57% when reared at 25 °C compared with 10 °C (4.1 and 9.7 days, respectively). The effects of soil conditions on S. lepidus eggs and larvae are discussed in the context of global climate change and how such empirically based information could be useful for refining existing mathematical models of these processes.  相似文献   

7.
《Applied soil ecology》2007,35(1):21-24
Field studies were conducted over two seasons to investigate effects of random versus highly aggregated spatial arrangements of sclerotia of S. sclerotiorum, and effects of biocontrol agent density and formulation additives, on colonization of sclerotia by Trichoderma spp. Application of T. harzianum encapsulated in alginate pellets with either bran or polyethylene glycol additives increased the percentages of sclerotia colonized in both years, but there was no difference between additives in either year. Higher pellet densities (200 pellets/m2 versus 40 pellets/m2) resulted in higher proportions of sclerotia colonized by Trichoderma spp. in one season but not in the other. However, when sclerotia were in highly aggregated spatial patterns, significantly higher percentages were colonized in both years, compared to sclerotia in random distributions.  相似文献   

8.
We used the eddy-covariance technique to measure evapotranspiration (E) and gross primary production (GPP) in a chronosequence of three coastal Douglas-fir (Pseudotsuga menziesii) stands (7, 19 and 58 years old in 2007, hereafter referred to as HDF00, HDF88 and DF49, respectively) since 1998. Here, we focus on the controls on canopy conductance (gc), E, GPP and water use efficiency (WUE) and the effect of interannual climate variability at the intermediate-aged stand (DF49) and then analyze the effects of stand age following clearcut harvesting on these characteristics. Daytime dry-foliage Priestley–Taylor α and gc at DF49 were 0.4–0.8 and 2–6 mm s?1, respectively, and were linearly correlated (R2 = 0.65). Low values of α and gc at DF49 as well at the other two stands suggested stomatal limitation to transpiration. Monthly E, however, showed strong positive linear correlations to monthly net radiation (R2 = 0.94), air temperature (R2 = 0.77), and daytime vapour pressure deficit (R2 = 0.76). During July–September, monthly E (mm) was linearly correlated to monthly mean soil water content (θ, m3 m?3) in the 0–60 cm layer (E = 453θ ? 21, R2 = 0.69), and GPP was similarly affected. Annual E and GPP of DF49 for the period 1998–2007 varied from 370 to 430 mm and from 1950 to 2390 g C m?2, respectively. After clearcut harvesting, E dropped to about 70% of that for DF49 while ecosystem evapotranspiration was fully recovered when stand age was ～12 years. This contrasted to GPP, which varied hyperbolically with stand age. Monthly GPP showed a strong positive linear relationship with E irrespective of the stand age. While annual WUE of HDF00 and HDF88 varied with age from 0.5 to 4.1 g C m?2 kg?1 and from 2.8 to 4.4 g C m?2 kg?1, respectively, it was quite conservative at ～5.3 g C m?2 kg?1 for DF49. N-fertilization had little first-year response on E and WUE. This study not only provides important results for a more detailed validation of process-based models but also helps in predicting the influences of climate change and forest management on water vapour and CO2 fluxes in Douglas-fir forests.  相似文献   

9.
The endogeic earthworm Pontoscolex corethrurus (Müller, 1857) was the most abundant species (75%) in soil contaminated with hydrocarbons, mostly benzo(a)pyrene (BaP), in the state of Tabasco (Mexico). The earthworm P. corethrurus was tested for its capacity to remove 100 mg BaP kg−1 from an Anthrosol soil (sterilized or not) and amended with legume Mucuna pruriens (L.) DC. var. utilis (Wall. ex Wight) Baker ex Burck (3%) or the grass Brachiaria humidicola (L.) DC (3%) (recently renamed as Urochloa humidicola (Rendle) Morrone & Zuloaga) in an aerobic incubation experiment. P. corethrurus removed 26.6 mg BaP kg−1 from the sterilized soil and application of B. humidicola as feed increased this to 35.7 mg BaP kg−1 and M. pruriens to 34.2 mg BaP kg−1 after 112 days. The autochthonous microorganisms removed 9.1 mg BaP kg−1 from the unsterilized soil and application of B. humidicola increased this to 18.0 mg BaP kg−1 and M. pruriens to 11.2 mg BaP kg−1. Adding P. corethrurus to the unsterilized soil accelerated the removal of BaP and 36.1 mg kg−1 was dissipated from soil. It was found that the autochthonous microorganisms removed BaP from soil, but addition of P. corethrurus increased the dissipation 4-fold. The endogeic earthworm P. corethrurus can thus be used to remediate hydrocarbon-contaminated soils in tropical regions.  相似文献   

10.
Underestimation of nocturnal CO2 respiration using the eddy covariance method under calm conditions remains an unsolved problem at many flux observation sites in forests. To evaluate nocturnal CO2 exchange in a Japanese cypress forest, we observed CO2 flux above the canopy (Fc), changes in CO2 storage in the canopy (St) and soil, and trunk and foliar respiration for 2 years (2003–2004). We scaled these chamber data to the soil, trunk, and foliar respiration per unit of ground area (Fs, Ft, Ff, respectively) and used the relationships of Fs, Ft, and Ff with air or soil temperature for comparison with canopy-scale CO2 exchange measurements (=Fc + St). The annual average Fs, Ft, and Ff were 714 g C m−2 year−1, 170 g C m−2 year−1, and 575 g C m−2 year−1, respectively. At small friction velocity (u*), nocturnal Fc + St was smaller than Fs + Ft + Ff estimated using the chamber method, whereas the two values were almost the same at large u*. We replaced Fc + St measured during calm nocturnal periods with a value simulated using a temperature response function derived during well-mixed nocturnal periods. With this correction, the estimated net ecosystem exchange (NEE) from Fc + St data ranged from −713 g C m−2 year−1 to −412 g C m−2 year−1 in 2003 and from −883 g C m−2 year−1 to −603 g C m−2 year−1 in 2004, depending on the u* threshold. When we replaced all nocturnal Fc + St data with Fs + Ft + Ff estimated using the chamber method, NEE was −506 g C m−2 year−1 and −682 g C m−2 year−1 for 2003 and 2004, respectively.  相似文献   

11.
《Applied soil ecology》2006,32(3):186-198
Comparisons of organic and inorganic fertilizer effects on nematode communities depend on the specific organic fertilizer used. Field experiments were conducted during 2001 and 2002 in a squash (Cucurbita pepo) agroecosystem to determine if applying sunn hemp (Crotalaria juncea) hay as an organic fertilizer improved nematode communities involved in soil nutrient cycling compared to an equivalent N rate (100 kg N/ha) of ammonium nitrate. Fertilizer source had minimal effect on nematode communities in 2001 when treatments were applied after a winter cover crop of oats (Avena sativa), but differences (P ≤ 0.05) between the fertilizer sources occurred in 2002 when no winter cover cropping preceded squash. Fertilization with sunn hemp hay increased abundance of the bacterivore guilds Ba1 and Ba2, and increased fungivores at the end of the experiment. Compared to ammonium nitrate, fertilization with sunn hemp hay resulted in a community with lower maturity index, higher enrichment index, and lower channel index, consistent with a disturbed and nutrient-enriched soil food web undergoing bacterial decomposition. Sunn hemp hay occasionally stimulated omnivorous nematodes, but suppressed plant-parasitic nematodes relative to ammonium nitrate fertilizer. Increasing the sunn hemp hay rate to 200 kg N/ha increased the abundance of bacterivores, fungivores, and predatory nematodes, and total nematode abundance compared to hay at 100 kg N/ha. Fertilization with ammonium nitrate increased the percentage of herbivores, but reduced percentage and abundance of omnivores. In conclusion, sunn hemp fertilizer maintained greater numbers of nematodes involved in nutrient cycling as compared to ammonium nitrate.  相似文献   

12.
《Applied soil ecology》2007,35(2):380-389
To compare the impact of parasite control agents in sheep faeces, 1 kg quantities of fresh faeces were spread uniformly over 1 m2 pasture plots in June 2001 (winter; a time of high earthworm activity). Faecal treatments applied to five replicate plots were C− (none), C+ (from untreated sheep), B (from sheep with an intra-ruminal bolus releasing a benzimidazole anthelmintic—‘albendazole’), ML (from sheep with a bolus releasing a macrocyclic lactone anthelmintic—‘ivermectin’), F (from sheep receiving a daily feed supplement containing chlamydospores of the nematophagous fungus, Duddingtonia flagrans). The disappearance of faeces was assessed visually over the 50 days following faecal application, then soil samples were taken to assess: (a) populations of earthworms and other soil macrofauna, (b) nematodes and other soil microfauna, and (c) the presence of D. flagrans in soil. Faecal disappearance was greatest in F and C+ plots and least in ML and B plots at 12 and 23 days (P < 0.05). Earthworm casting after 23 and 50 days was greater (P < 0.05) in plots with faeces (C+, ML, F, but not B) than in plots without faeces (C−). Greater earthworm activity in plots with faeces was reflected in greater numbers of earthworms, cocoons and greater biomass m−2 than in C− plots. On the basis of faecal dry weight applied, F plots had most earthworms and ML plots the least. After 50 days total nematodes in 0–5 cm soil showed a treatment effect (P < 0.001), being more abundant in F, C+ and B than in C− and ML plots; enchytraeids, rotifers, tardigrades and copepods showed no treatment effects. A few nematode taxa (Acrobeles, Alaimus, Pungentus, Tylencholaimus) showed significant treatment effects. The greatest effect among nematodes was in nematode channel ratio (NCR) (P < 0.008), with a decrease in F plots; changes in NCR may reflect the impact of earthworm activity on soil processes rather than a direct effect of the fungal treatment on nematodes. D. flagrans did not become established in the soil. During the trial conditions were favourable for earthworms and their activity was high in all treatments receiving faeces, with F and ML plots being the extremes. There was an apparent shift towards fungal-mediated decomposition in F plots. At the end of the 50-day trial, in a period when earthworms were active, there was no evidence of differential effects of any of the anthelmintic treatments on environmental indicators.  相似文献   

13.
Nitrogen mineralization and nitrification in the soil of sub-alpine ruderal community of Mount Uludağ, Bursa, Turkey was measured for 1 year, under field conditions with Verbascum olympicum and Rumex olympicus being the dominant pioneer species under dry and wet sites, respectively. Seasonal fluctuations were observed in N mineralization and nitrification. The net N mineralization and nitrification were high in early summer and winter, due to high moisture. The annual net N mineralization rate (for the 0–15 cm soil layer) was higher under R. olympicus (188 kg N ha−1 yr−1) than under V. olympicum (96 kg N ha−1 yr−1). A significant positive correlation between net N mineralization and soil organic C (r2 = 0.166), total N (r2 = 0.141) and water content (r2 = 0.211) was found. Our results indicate that N mineralization rate is high in soils of ruderal communities on disturbed sites and varies with dominant species and, a difference in net N mineralization rate can be attributed to organic C, total N and moisture content of soils.  相似文献   

14.
Polar ecosystems are currently experiencing some of the fastest rates of climate warming. An increase in soil temperature in High Arctic regions may stimulate soil permafrost melting and microbial activity, thereby accelerating losses of greenhouse gases. It is therefore important to understand the factors regulating the rates of C turnover in polar soils. Consequently, our aims were to: (1) assess the concentration of low molecular weight (MW) dissolved organic carbon (DOC) in soil, (2) to investigate the temperature-dependent turnover of specific low MW compounds, and (3) to analyse the influence of substrate concentration on C cycling. Microbial mineralisation of labile low MW DOC in two High Arctic tundra soils was investigated using soil solutions spiked with either 14C-labelled glucose or amino acids. Spiked solutions were added to the top- and sub-soil from two ecosystem types (lichen and Carex dominated tundra), maintained at three temperatures (4–20 °C), and their microbial mineralisation kinetics monitored. 14CO2 evolution from the tundra soils in response to 14C-glucose and -amino acid addition could best be described by a double first order exponential kinetic equation with rate constants k1 and k2. Both forms of DOC had a short half-life (t1/2) in the pool of microbial respiratory substrate (t1/2 = 1.07 ± 0.10 h for glucose and 1.63 ± 0.14 h for amino acids; exponential coefficient k1 = 0.93 ± 0.07 and 0.64 ± 0.06 h?1 respectively) whilst the second phase of mineralisation, assumed to be C that had entered the microbial biomass, was much slower (average k2 = 1.30 × 10?3 ± 0.49 × 10?4 h?1). Temperature had little effect on the rate of mineralisation of 14C used directly as respiratory substrate. In contrast, the turnover rate of the 14C immobilized in the microbial biomass prior to mineralisation was temperature sensitive (k2 values of 0.99 × 10?3 h?1 and 1.66 × 10?3 h?1 at 4 and 20 °C respectively). Concentration-dependent glucose and amino acid mineralisation kinetics of glucose and amino acids (0–10 mM) were best described using Michaelis–Menten kinetics; there was a low affinity for both C substrates by the microbial community (Km = 4.07 ± 0.41 mM, Vmax = 0.027 ± 0.005 mmol kg?1 h?1). In conclusion, our results suggest that in these C limiting environments the flux of labile, low MW DOC through the soil solution is extremely rapid and relatively insensitive to temperature. In contrast, the turnover of C incorporated into higher molecular weight microbial C pools appears to show greater temperature sensitivity.  相似文献   

15.
The aim of this study was to test the impact of compost and biochar, with or without earthworms, on the mobility and availability of metals, and on the growth of grass to re-vegetate contaminated soil from the Parys Mountain mining site, Anglesey. We also determined if the addition of earthworms compromises remediation efforts.In a laboratory experiment, contaminated soil (1343 mg Cu kg?1, 2511 mg Pb kg?1 and 262 mg Zn kg?1) was remediated with compost and/or biochar. After 77 days Lumbricus terrestris L. earthworms were added to the treatment remediated with both compost and biochar, and left for 28 days. L. terrestris was not able to survive in the biochar, compost or unamended treatments. A germination and growth bioassay, using Agrostis capillaris (Common Bent) was then run on all treatments for 28 days.The combination of biochar and compost decreased water soluble Cu (from 5.6 to 0.2 mg kg?1), Pb (from 0.17 to less than 0.007 mg kg?1) and Zn (from 3.3 to 0.05 mg kg?1) in the contaminated soil and increased the pH from 2.7 to 6.6. The addition of L. terrestris to this treatment had no effect on the concentration of the water soluble metals in the remediated soil.The compost was the only treatment that resulted in germination and growth of A. capillaris suitable for re-vegetation purposes. However, the combination of compost and biochar (with or without L. terrestris) produced the lowest concentrations of Cu (8 mg kg?1) and Zn (36 mg kg?1) in the aboveground biomass, lower than the compost treatment (15 mg Cu kg?1 and 126 mg Zn kg?1).The addition of biochar and compost both separately and as co-amendments was effective in reducing the mobility and availability of metals. The addition of L. terrestris did not re-mobilise previously sequestered metals.  相似文献   

16.
Metal(loid) accumulation and arbuscular mycorrhizal (AM) status of the dominant plant species, Cynodon dactylon, growing at four multi-metal(loid)s-contaminated sites and an uncontaminated site of China were investigated. Up to 94.7 As mg kg?1, 417 Pb mg kg?1, 498 Zn mg kg?1, 5.8 Cd mg kg?1 and 27.7 Cu mg kg?1 in shoots of C. dactylon were recorded. The plant was colonized consistently by AM fungi (33.0–65.5%) at both uncontaminated site and metal-contaminated sites. Based on morphological characteristics, fourteen species of AM fungi were identified in the rhizosphere of C. dactylon, with one belonging to the genus of Acaulospora and the other thirteen belonging to the genus of Glomus. Glomus etunicatum was the most common species associated with C. dactylon growing at metal-contaminated sites. Spore abundance in the rhizosphere of C. dactylon growing at the metal-contaminated soils (22–82 spores per 25 g soil) was significantly lower than that of the uncontaminated soils (371 spores per 25 g soil). However, AM fungal species diversity in the metal-contaminated soils was significantly higher than that in the uncontaminated soils. This is the first report of AM status in the rhizosphere of C. dactylon, the dominant plant survival in metal-contaminated soils. The investigation also suggests that phytorestoration of metal-contaminated sites might be facilitated using the appropriate plant with the aid of tolerant AM fungi.  相似文献   

17.
The response of the soil food web structure to soil quality changes during long-term anthropogenic disturbance due to farming practices has not been well studied. We evaluated the effects of three tillage systems: moldboard plow/rotary harrow (MP), rotary cultivator (RC), and no-tillage (NT), three winter cover-crop types (fallow, FL; rye, RY; and hairy vetch, HV), and two nitrogen fertilization rates (0 and 100 kg N ha−1 for upland rice, and 0 and 20 kg N ha−1 for soybean production) on changes in nematode community structure. Sixty-nine taxa were counted, total nematode abundance (ALL), bacterial feeders (BAC), predators (PRD), omnivores (OMN), and obligatory root feeders (ORF) were more abundant in NT than in MP and RC, but fungal feeders and facultative root feeders (FFR) were more abundant in RC than in NT and MP. Cover crop also influenced nematode community structure; rye and hairy vetch were always higher in ALL, BAC, FFR, ORF, and OMN than fallow. Seasonal changes in nematode community structure were also significant; in particular, as soil carbon increased, nematode abundance also increased. The relationship between nematode indices and soil carbon was significant only in NT, but not in MP and RC. In NT, with increasing soil carbon, enrichment index and structure index (SI) were positive and significant and channel index was negative. Bulk density was significantly negatively correlated with FFR and ORF. Seasonal difference in nematode community between summer and autumn was larger in an upland rice rotation than in a soybean rotation. Over the nine-year experiment, SI increased not only in NT but also in MP and RC, suggesting that repeated similar tillage inversions in agroecosystems may develop nematode community structures adapted to specific soil environmental conditions. Because NT showed the highest values of both SI and soil carbon, the increase of soil carbon in NT is expected to have a great impact on developing a more diverse nematode community structure.  相似文献   

18.
To minimize application of nematicides in banana fields, crop systems have been developed in the French West Indies that combine fallow or rotation crops and nematode-free in vitro plants. After two to four years, populations of the burrowing nematode Radopholus similis have developed enough to cause economic losses, leading banana growers to use nematicides. To understand how banana fields are recontaminated, we studied the dissemination of R. similis by water flow. At a 1-m scale, we analyzed the dispersion of R. similis under a rainfall simulator: we isolated a 1-m2 study plot, placed a R. similis suspension on the upstream soil surface, and simulated a 60 mm/h rainfall for 72 min. We collected soil samples every 10 cm downstream after 12 min of rainfall, and subsequently at 20-min intervals, and extracted the nematodes using a Seinhorst elutriator and then a Baermann funnel. Our results showed that the nematode dissemination follows an inverse exponential law, and depends more on soil moisture at the beginning of rainfall than on the length of rainfall: in fresh soil, 69–80% of the R. similis recovered were found less than 10 cm downstream from the nematode inoculation line, whereas in wetted soil, 76–85% of the recovered individuals were collected in the outlet tub located downstream from the apparatus. This passive dissemination model partially explains the distance covered by individual nematodes but not the low percentage of motile nematodes recovered in the outlet tub (10% and 36% in fresh and wet soils) compared to the percentage of motile nematodes found in the soil (80% and 84% in fresh and wet soils). Indeed, water runoff is likely to disseminate R. similis over long distances only when soil moisture is close to field capacity.  相似文献   

19.
It is known that carbon (C) amendments increase microbial activity in anoxic soil microcosm studies, however the effects on abundance of total and denitrifier bacterial communities is uncertain. Quantitative PCR was used to target the 16S rRNA gene for the total bacterial community, the nosZ functional gene to reflect a broad denitrifier community, and functional genes from narrow denitrifier communities represented by Pseudomonas mandelii and related species (cnorBP) and Bosea/Bradyrhizobium/Ensifer spp. (cnorBB). Repacked soil cores were amended with varying amounts of glucose and red clover plant tissue (0–1000 mg C kg? 1 of soil) and incubated for 96 h. Carbon amendment significantly increased respiration as measured by cumulative CO2 emissions. Inputs of red clover or glucose at 1000 mg C kg? 1 of soil caused increased abundance in the total bacteria under the conditions used. There was about an approximate 2-fold increase in the abundance of bacteria bearing the nosZ gene, but only in treatments receiving 500 or 1000 mg C kg? 1 of soil of glucose or red clover, respectively. Additions of ≥ 500 mg C kg? 1 soil of red clover and ≥ 250 mg C kg? 1 of glucose increased cnorBP-gene bearing denitrifiers. Changes in abundance of the targeted communities were related to C availability in soil, as indicated by soil respiration, regardless of C source. Applications of C amendments at rates that would occur in agricultural soils not only increase microbial activity, but can also induce changes in abundance of total bacterial and denitrifier communities in studies of anoxic soil microcosms.  相似文献   

20.
Polycyclic aromatic hydrocarbons (PAH) are ubiquitous pollutants that are toxic and recalcitrant to degradation by bacteria. This research evaluated the toxicity of different concentrations [10, 20, 40, 60, 80 and 100 μg mL−1] of phenanthrene (PHE) or benzo[a]pyrene (BaP) on the growth of Rhizobium tropici CIAT899 under in vitro conditions as well as the potential degradation of PHE and BaP by this bacterium. At 24 h, a 40% decrease in Rhizobium growth was observed when exposed to 40 μg mL−1 of either PHE or BaP. Furthermore, bacterial growth was completely inhibited by PHE or BaP applied in 80 and 100 μg mL−1. After 96 h, the growth of R. tropici at 40 μg PHE mL−1 or 60 μg BaP mL−1 was similar to those treatments without PAH. To evaluate R. tropici degrading capabilities, supernatants of cultures with 40 μg PHE mL−1 or 60 μg BaP mL−1 were analyzed by gas chromatography coupled to mass spectrophotometer (GC–MS). R. tropici was able to degrade either PHE or BaP diminishing its concentration in 20% and 25% during the first 24 h, degradation obtained at 120 h was 50% and 45% for PHE or BaP, respectively. This research shows for the first time that R. tropici CIAT 899 grows in liquid culture medium contaminated with PAH, and moreover is able to growth and to degrade either PHE or BaP.  相似文献   

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