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1.
The G-and C-band chromosome patterns and the location of the nucleolus organizer regions (NORs) are presented for A. namaquensis (2n = 24), A. granti (2n = 32) and A. chrysophilus (2n = 44; 2n = 50). The presence of two distinct cytotypes in what is conventionally recognized as A. chrysophilus is indicative of the presence of two discrete species which, karyology apart, appear to be indistinguishable using existing identification keys. The chromosomal relationships of the South African species and the taxonomic implications of these data are discussed.  相似文献   

2.
Mastomys natalensis, Aethomys chrysophilus and Saccostomus campestris are three common and widespread rodent species in the Kruger National Park. Chromosomal and protein electrophoretic investigations reveal that these species are in fact complexes of morphologically similar, though genetically distinct, species. Their respective distributions in the Kruger National Park are reported and species diagnostic characters (diploid chromosome number, genitalia, spermatozoa and electromorphs) are presented for the practical identification of the cryptic species. The value of a genetical approach to resolving cryptic species is emphasized with respect to ecological studies.  相似文献   

3.
The mammal fauna of the Kammanassie Mountain State Forest Reserve and Mountain Catchment Area was censused in the high-rainfall southeastern sector and low-rainfall northwestern sector from 2-12 February, 1979. Collecting yielded 287 specimens of 17 species of small mammals, while the presence of a further 16 species of larger mammals was confirmed. Mean trapping success was low (2,0%) which reflects the low density of most species. Of the 10 species of small mammals collected in the southeastern sector Acomys subspinosus and Otomys irroratus were abundant, while Rhabdomys pumilio, Praomys verreauxi and Myosorex varius were common; the other five species collected were rare. In the northwestern sector the species composition and relative density of each differed. Here Aethomys namaquensis was abundant, R. pumilio common, and five other species (including A. subspinosus and O. irroratus) rare. Few carnivores occur. Stomach samples of collected specimens yielded information on feeding habits; species vary considerably in their diet. Twenty-four species of both large and small mammals occur in the southeastern part, and 25 in the northwestern sector; 17 species are common to both.  相似文献   

4.
This is the first detailed study of the post-natal development of Aethomys chrysophilus. Physical measurements were taken from 37 litters consisting of 116 young, and the behaviour of 37 young from 12 litters was observed. The physical development of the young is described and the weight and linear increases analysed. Litter size varied between one and five with an average of 3,1 young per litter for 37 litters. The minimum age of sexual maturity was approximately 82 days, and the shortest interval between litters was 26 days. Major behavioural changes were found at six, 12 and 26 days, and on this basis the post-natal development is divided into Neonatal (0-5 days). Transition (6-11 days), Infantile (12-25 days) and Juvenile (26-82 days) periods. Nipple-clinging dominated the early stages of development and the modifications of the incisors for this purpose are described. The parent-young relationship and mortality of the young are discussed. In addition, the post-natal development of A. chrysophilus is compared with that of three other South African murids, namely Aethomys namaquensis, Thallomys paedulcus and Praomys (Mastomys) natalensis.  相似文献   

5.
DNA barcoding represents an objective tool for fast species identification, especially for taxa for which morphological identification is difficult. One current limitation of barcoding is the lack of reference sequences for many groups. While many European and North American countries have started their own barcoding initiatives to generate complete local inventories and databases, such efforts are sparse for African, Asian and South American countries, despite their high biodiversity and comparably poorly explored faunas. Therefore, it is important to start local barcoding efforts in such countries. In this study we performed DNA barcoding for the band-winged grasshoppers of the Biskra province in Algeria, a region of high diversity for this taxon. All specimens were identified morphologically and then barcoded. We generated a total of 47 sequences of the COI gene for 22 morphologically identified species of Oedipodinae, many of which were sequenced for the first time. We present the data in a phylogenetic tree, which suggests monophyly for most genera, but rejects it for Sphingonotus and Vosseleriana. Statistical species delimitation worked well for most genera, except those within the Sphingonotini, likely because these have radiated rather recently. Together with data sourced from the literature we used our new data set to generate an updated list of band-winged grasshoppers for the region. Several species are recorded for the region and for the country for the first time. One species appears to be new to science. Furthermore, we found geographic variation within several more widespread species for which data from other countries were present. We consider the new data as an important resource for future faunistic, ecological and biodiversity studies and point out the importance of local (taxon-specific) barcoding studies.  相似文献   

6.
An old quarry, 2,5 hain size near Livingstone in southern Zambia was kill-and live-trapped between September 1974 and December 1976 to determine ecological relations among. rodent species inhabiting it. Seven species were found to comprise the old quarry rodent community. Praomys natalensis was by far the most common although Saccostomus campestris and Lemniscomys griselda were also abundant. Four species (Tatera leucogaster, Steatomys pratensis, Mus minutoides and Aethomys chrysophilus were rare. Food and micro-habitat preferences of S. campestris and P. natalensis appeared similar. Seasonal fluctuations characterized the P. natalensis population while L. griselda was absent from the site during the latter part of the rainy season and early in the dry season. Pre-weaning survival of P. natalensis was very low, particularly early in the breeding season. The survival of the trappable population was good but declined following a burn at the study site. P. natalensis recruited into the population from May-July, lost between 20 and 35% of their body mass during the August-October period. Body mass increased as rodents attained sexual maturity early in the rainy season.  相似文献   

7.
Field studies (Lake Kariba shoreline and Salisbury) and experiments with a captive colony of 12 species of Rhodesian rodents were undertaken for a period of three years. Comparative behavioural data are presented here with special reference to den and nest behaviour, group and territorial behaviour, reproductive and juvenile behaviour, and activity pattern. No species was found to be truly gregarious except Dendromus mesomelas, but Praomys (Mastomys) natalensis, Lemniscomys griselda, Tatera leucogaster, and Aethomys chrysophilus were found to tolerate crowded conditions in captivity. Nipple dragging of young was found in both species of Aethomys and in Acomys, with the remainder observed to utilise mouth carrying behaviour. It was noted that especially in Rhabdomys and Praomys (Mastomysj, and also in Lemniscomys, young have a strong tendency to scatter in all directions from a disturbed nest, even before their eyes open. The significance of nipple dragging, scattering and crowding behaviour and correlation to survival and tendency to irrupt are discussed. All species were found to be nocturnal (usually with irregular sub cycles of activity) except Rhabdomys (largely diurnal), Lemniscomys (diurnal/crepuscular) and Otomys (nocturnal/crepuscular).  相似文献   

8.
A five‐year‐old, entire female mixed‐breed dog was presented with corneal oedema and episcleral hyperaemia in the left eye. The ophthalmological examination revealed the presence of a free‐swimming nematode in the anterior chamber. Circulating microfilariae were not observed by a modified Knott test nor were adult antigens detected in serum by a commercial ELISA. The parasite was surgically removed from the dog's eye, but its anterior end was damaged during the surgery. Based on the morphology of the posterior end, the nematode was preliminarily identified as a male Dirofilaria immitis. The species identification was confirmed by PCR amplification and sequencing of the mitochondrial coxI and 12S rDNA genes, using a DNA barcoding approach. Although other cases of ocular dirofilariosis by D. immitis have been previously recorded in Australia and the United States, the case reported herein is the first in a dog from Europ.  相似文献   

9.
The freshwater snails belonging to the genus Melanoides Olivier, 1804 are widespread across tropical regions of the world and endemic species have evolved in the African Lakes Malawi, Mweru and Tanganyika. The endemic Melanoides species of Lake Malawi have been investigated several times during the last century, due to their large conchological variation, but no unambiguous answer regarding the number of species has been given. The phylogenetic relationship between morphs or genetic clones of Melanoides in Lake Malawi was inferred by phylogenetic analyses of DNA sequence data from the mitochondrial genes 16S and COI. Additional sequences from GenBank were included to investigate the relationship to other morphs from different parts of the world. For the first time, a putative secondary structure was developed for a partial region of 16S in this genus to identify the variability of the secondary structure in stems and loops. The molecular analyses indicated that several genetic clones exist in Lake Malawi and that M. tuberculata is a paraphyletic taxon. It is not clear from the results whether invasions or dispersals account for the complex situation in Lake Malawi. The basal position of M. admirabilis, endemic to Lake Tanganyika, in the inferred phylogeny indicates that Africa might be the origin of the genus. The results further indicate that three major clades of Melanoides, consisting of several genetic clones, are present in Lake Malawi; one clade consisting of invasive M. tuberculata, another of native M. tuberculata and a third consisting of the M. polymorpha- complex. It appears as if the unique development of morphs within the Melanoides genus in Lake Malawi has evolved primarily by divergence of genetic clones instead of species differentiation.  相似文献   

10.
The objectives of this study were to determine the prevalence and characteristics of Clostridium difficile shedding in owned dogs in Nigeria and Malawi. Clostridium difficile was isolated from 31/120 (26%) dogs in Nigeria and 11/92 (12%) dogs in Malawi (p = 0.012). Overall, 22/42 (52%) isolates were toxigenic; 17/31 (55%) from Nigeria and 5/11 (45%) from Malawi. All toxigenic isolates possessing tcdA and tcdB, and only one also possessed cdtA/B. Sixteen different ribotypes were found, ten (63%) of which were non‐toxigenic. Most isolates corresponded to ribotypes that have been previously identified in humans or livestock. The role of dogs in transmission of C. difficile and the clinical implications of C. difficile shedding in dogs remain unclear. These data indicate that dogs could act as a source of C. difficile for exposure of other species, including humans; however, the true risk is unknown. Further study of the ecology of C. difficile and the role of dogs in disease of humans and other domestic animals is indicated.  相似文献   

11.
One hundred and ninety five specimens of free tailed bat (Tadarida brasiliensis) obtained from two regions of Chile were analized to determine parasite infection. From those specimens the endoparasites identified were: Trematoda: Acanthatrium lunatum, Limatuoides limatulus and Paralecithodendrium carlsbadensis; Cestoda: Vampirolepis sp.; Nematoda: Nochtia pilosus and Anoplostrongylus paradoxus. The ectoparasites identified were Chiroptonyssus robustipes, Ewingnana inaequalis and Notoedres lasionycteris all of them are acari species. Even thought the bat specimens are from the same species on both survey sites, the results differ for each site when the parasite species identified are compared.  相似文献   

12.
《African Zoology》2013,48(1):128-137
The breeding dynamics of three species of rodents, Mastomys natalensis, Aethomys chrysophilus and Gerbilliscus vicina were investigated in a seasonal environment (wet versus dry) in Berega in the eastern parts of central Tanzania. Berega has a distinct unimodal rainfall pattern, with most rainfall from November to April/May. We hypothesized that breeding of rodents in central Tanzania would be confined to the wet season, when unlimited resources would be available for reproduction. We provide evidence of breeding discontinuity in the three species, showing that breeding was seasonally restricted to the wet season and early in the dry season. The observed discontinuity could largely be ascribed to variation in primary productivity between the wet and dry seasons. Reproductively active females were found in the population as early as November, a month into the rainy season, but when early rains occurred, some individuals were already breeding in October. Breeding was more intensive in the latter part of the wet season (March–May) and completely ceased during the dry season. For M. natalensis, survival was highest in the wet period and low in the dry season. The study provides knowledge on the breeding dynamics of rodents in central Tanzania, which can help farmers to take proactive rodent management decisions to prevent high rodent densities and reduce crop damage in the fields. Application of control measures by the community early in the season when populations of reproductive females is lowest will be most rewarding.  相似文献   

13.
Species of the genus Gynandropaa within the family Dicroglossidae are typical spiny frogs whose taxonomic status has long been in doubt. We used integrative methods, involving morphological and molecular analyses, to elucidate the phylogenetic relationships, and to determine identities and the geographic distribution of each valid species. We obtained DNA sequence data of 5 species of Gynandropaa (complete sequences of the mitochondrial NADH dehydrogenase subunit 2 [ND2] gene, and 890 bp of 12S rRNA and 16S rRNA partial sequences) from 37 localities (including the topotypes of 5 described species) and constructed Bayesian and maximum‐likelihood trees to examine the patterns of phylogeography. A total of 28 morphological variables were taken on 624 specimens. Three clades with clear geographic patterns were recognized: clade C (from south‐western Sichuan Province and central Yunnan Province), clade E (western Guizhou Province and eastern to central Yunnan Province) and clade W (western to southern Yunnan Province). Integrating morphological characteristics and distribution information, the clades W, E and C represent Gynandropaa yunnanensis, G. phrynoides and G. sichuanensis, respectively. We draw the following conclusions: (i) the taxon G. phrynoides, formerly evaluated as a junior synonym of G. yunnanensis, is revalidated herein at the rank of species; (ii) G. liui is a junior synonym of G. sichuanensis; and (iii) G. yunnanensis is a valid species while G. bourreti is probably a subspecies of G. yunnanensis, with the distribution range from Vietnam to southern Yunnan Province. This study clears up the taxonomic status of Gynandropaa and provides important information for understanding the evolution and conservation of these spiny frogs.  相似文献   

14.
The collection of biting midges was taking place some months before the first bluetongue outbreak in Belgium in August 2006. The Walloon Agricultural Research Centre had been monitoring aphid populations at two sites annually in Belgium (Gembloux and Libramont), using two stationary ‘12-m’ Rothamsted suction traps. For the Gembloux trap, collections of insects captured daily from 11 May 2006 onwards were already available at the time of the outbreak. An examination of these samples revealed the presence of Culicoides, some species of which are considered as potential vectors of the bluetongue virus (BTV). The trapping was therefore extended beyond the normal aphid activity period and the Culicoides captured were identified to species level. From 11 May to 31 December 2006, the Gembloux trap caught 664 Culicoides specimens belonging to 19 species comprising known BTV-vectors. The second trap, at Libramont, was reactivated from 12 September to 13 October and caught 97 specimens belonging to nine species, all of which had been found at the Gembloux site. Among the 19 species identified, four were new to Belgian fauna: Culicoides achrayi, C. deltus, C. lupicaris and C. newsteadi. This paper examines the overall phenology and the physiological status of Culicoides in 2006 before and during the bluetongue epidemic. It discusses the potential of the Rothamsted suction trap to monitor Culicoides.  相似文献   

15.
《African Zoology》2013,48(2):271-284
Phylogenetic relationships in the genus Aethomys were examined based on qualitative cranial data for all currently recognized species. A cladistic analysis suggested the presence of three clades: 1) A. bocagei, A. thomasi, A. silindensis, A. kaiseri, and A. nyikae;2) A. chrysophilus, A. ineptus, and A. hindei;3) A. granti, A. namaquensis, and A. stannarius. These phylogenetic groupings are largely inconsistent with previously postulated supraspecific relationships for the genus. Nonetheless, relationships within each clade broadly correspond with some previously suggested evolutionary hypotheses among some members of the genus, the only notable exception being a close affinity between two southern African taxa (A. namaquensis and A. granti) and the geographically disjunct West African endemic, A. stannarius. A phylogram derived from an analysis of anagenetic divergence among taxa supported the widely-held view of a close affinity between A. namaquensis and A. granti that has traditionally led to their inclusion in the subgenus Micaelamys. These results are relatively concordant with recent molecular studies based on microcomplement fixation of albumin, mitochondrial DNA cytochrome b and 16S rRNA data, which collectively suggest that the genus Aethomys is paraphyletic. Possible paraphyly is also reflected by a relatively low bootstrap value at the node uniting all ingroup taxa in this study, as well as previous studies on dental morphology, modes of karyotypic change, and gross sperm and bacular morphology, and strongly supports the taxo-nomic elevation of the currently recognized subgenera Micaelamys and Aethomys to full generic rank. Despite the broad correspondence between the morphological and molecular data, homoplasy and low bootstrap support in the present investigation point to the need for a careful consideration of the power and choice of morphological characters in future studies on this and related groups of murine rodents.  相似文献   

16.
Three Meriones species inhabit Tunisia, namely M. shawi, M. libycus and M. crassus, but little genetic data exist on these gerbils. We collected Meriones from eight localities in Tunisia, and obtained mitochondrial (cytochrome b) and nuclear (IRBP) gene sequence data for 37 and 13 specimens, respectively, belonging to two species: M. shawi and M. libycus. We also optimised three microsatellite markers previously described in M. unguiculatus to obtain a finer analysis of their genetic diversity and geographic structure, given their wide distribution. Phylogenetic inferences of cyt b and IRBP data for these species, in the context of other gerbillin data, corroborate their taxonomic affinities reported by previous studies. High cyt b haplotype diversity was observed in both species (25 haplotypes in 29 and 27 sequences for M. shawi and M. libycus, respectively) with little geographical structure for M. shawi but three divergent groups in M. libycus. The average microsatellite diversity within each population was high (HO ≥ 0.6, HE ≥ 0.8) with M. libycus populations attaining the highest values. Population differentiation was moderate for several population pairs (Fst ≥ 0.1), the highest being between M. shawi populations. However, genetic distance among populations was not significantly correlated with geographic distance in either M. shawi or M. libycus. Our results contribute to a better characterisation of Tunisian Meriones species, suggesting high geographic structure in mtDNA of M. libycus populations within North Africa.  相似文献   

17.
《African Zoology》2013,48(3):83-97
Throughout the Miocene, the African landscape underwent broad climatic shifts that profoundly influenced the distribution of fauna and flora. Since the late Miocene, these shifts have created a landscape in southern Africa that is strongly characterised by savanna and arid environments. Forests persist in small fragments, primarily in mountainous or heterogeneous landscapes. Arthroleptis wahlbergii is a small frog endemic to eastern South Africa that has presumed low dispersal ability. Because of its preference for forests, the dynamics of forests since the late Miocene in this region might have promoted diversification within A. wahlbergii. To investigate whether habitat fragmentation might have driven divergences among populations, we carried out species distribution modelling and population level and phylogenetic analyses using two genetic loci (16S, mitochondrial; RAG-1, nuclear) sequenced for 48 individuals from 14 forests across the c. 500 km range of this species. There is substantial population-level structuring within A. wahlbergii, however the structure does not relate to forest types or catchments. We instead propose that the structure is a result of dynamic and idiosyncratic changes in forest connectivity over the Pleistocene. We identified two geographically circumscribed clades, the northern of which corresponds to true A. wahlbergii. The southern clade corresponds to populations from which Arthroleptis wageri FitzSimons, 1930 was described. This has long been considered a synonym of A. wahlbergii, but our molecular phylogenetic and distribution modelling supports recognising A. wageri as a distinct species.  相似文献   

18.
Knowledge of what pest species are eating is important to determine their impact on stored food products and to plan management strategies accordingly. In this study, we investigated the food habits of 2 rodents, Rattus rattus (ship rat) and Mus musculus castaneus (house mouse) as well as an insectivore, Suncus murinus (shrew), present in human dwellings. Both a microhistological approach and a DNA barcoding approach were used in the present study. Following DNA extraction, amplification was performed using group‐specific primers targeting birds, plants and invertebrates. Resulting polymerase chain reaction products were sequenced and analyzed to identify the different prey species present in the gut contents. The findings from the application of both techniques were in agreement, but the detection of prey type with each technique was different. The DNA barcoding approach gave greater species‐level identification when compared to the microhistological method, especially for the invertebrate and avian prey. Overall, with both techniques, 23 prey taxa were identified in the gut contents of the 3 species, including 15 plants, 7 insects and a single bird species. We conclude that with a selection of suitable “barcode genes” and optimization of polymerase chain reaction protocols, DNA barcoding can provide more accurate and faster results. Prey detection from either technique alone can bias the dietary information. Hence, combining prey information of both microhistological analysis and DNA barcoding is recommended to study pest diet, especially if the pest is an omnivore or insectivore species.  相似文献   

19.
An analysis of morphological and allozyme variation in the Namaqua gecko, Pachydactylus namaquensis from southern Africa is presented. Three separately evolving lineages, well defined by morphology and allozyme variation, are identified. The isolated southern population, occurring on the southern escarpment and Cape Fold Mountains surrounding the western Little Karoo, is named P. kladamderma sp. nov., and is characterized by a slit-like ear opening, low number of granules bordering the mental (3-6) and mental and adjacent infralabials (513), the frequent (79%) occurence of the supralabial entering the nostril, and its drab brown base colouration. A northern population, occurring in southern Namibia and the Richtersveld is named P. haackei sp. nov., and is characterized by its more rounded or squared ear opening; high number of granules bordering the mental and adjacent infralabials (11-19), the general exclusion of the supralabial from the nostril (only 3.7% entry), and brighter, lighter colouration. It is further differentiated from P. kladaroderma on the basis of fixed differences at 11 allozyme loci. Both new species differ from P. namaquensis, which is mainly restricted to Little Namaqua- land, but is sympatric with P. haackei in the Lower Orange River region, by their more heterogenous dorsal scalation, smaller cloacal spurs, lack of spine-like tubercles on the lateral surfaces of the tail, and more fragile skin. The type locality of P. namaquensis is restricted to ‘the vicinity of Springbok, Little Namaqualand, Northern Cape Province, South Africa’.  相似文献   

20.
Abstract

Several species of marine fish caught in the wild and of freshwater ornamental fish were used in this study. Infected organs (liver, spleen, and kidney) were sampled for mycobacteria. Decontaminated tissue samples were plated onto selective media for mycobacterial recovery. After initial isolation, fluorescent and acid-fast staining techniques identified bacterial colonies to genus. Profiles of biochemical growth characteristics were used to further identify the isolates to species. Five species of Mycobacterium were identified: M. simiae, M. scrofulaceum, M. marinum, M. chelonae, and M. fortuitum. Of these, M. simiae and M. scrofulaceum have not been previously reported from fish. Tissue samples containing focal granulomatous lesions were prepared for electron microscopic examination.  相似文献   

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