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1.
The polyacrylamide gel electrophoresis (PAGE) test of Morris & Smith (1977) was evaluated for detection of potato spindle tuber viroid (PSTV) in breeding material. Number, density and mobility of nucleic acid bands in the electropherograms were influenced by genotype and growing temperature. So direct testing of genotypes was not reliable. After an intermediate viroid multiplication in tomato host plants at about 30oC and high irradiance, PSTV was reliably detectable with PAGE in inocula of potato samples of diverse origin. A 4-week incubation period proved to be suitable for inocula with low and high concentrations of a mild strain of PSTV (m-PSTV) as well as a severe strain of PSTV (s-PSTV). If incidence of PSTV is expected to be low, testing can be speeded up by bulking samples. With the combined tomato-intermediate/ PAGE assay, one m-PSTV or one s-PSTV infected leaf disk in 200 healthy ones was consistently detectable. Occasionally gels with a nucleic acid band of about the same relative mobility as the viroid band were found. Evidence that these bands were not caused by viroid is presented. A procedure to resolve such questionable test results is described. Infectivity of s-PSTV was higher than that of m-PSTV. Concentration of viroids in the inoculum influenced appearance of mild or severe symptoms and the rate of symptom production. 相似文献
2.
H.-L. WEIDEMANN 《EPPO Bulletin》1987,17(1):45-50
Potato spindle tuber viroid (PSTV) in potato plants was investigated by ‘return’ gel electrophoresis. The experiments were carried out under quarantine conditions in the greenhouse with primarily and secondarily infected plants. The PSTV content in different plant parts was estimated by the intensity of the viroid band in polyacrylamide gel. The results showed a decrease of viroid content from the upper to the lower parts of the plant. In both primarily and secondarily infected plants, PSTV was reliably detected in the top leaves, but less so in the lower leaves. In four out of ten secondarily infected plants, PSTV was found in the roots. In dormant tubers, the bands were more intense with samples obtained from the rose end and the heel than from those obtained from the medullary tissue. With one exception, all 64 tubers from 26 primarily infected plants were infected with PSTV. 相似文献
3.
Threats from potato spindle tuber viroid (PSTV) to potato breeding and centralized elite seed-tuber production have been identified in world potato genetic resources. In the UK effective diagnostic testing has proved essential in preventing acquisition. Inoculation of potato nucleic acids to tomato and subsequent viroid detection by polyacrylamide gel electrophoresis (PAGE) has proved a sensitive, but cumbersome, test over 8 years. Additionally, over 2 years, 32P-labelled PSTV cDNA was used to probe denatured sap and nucleic acid extracts: 10-4 of peak viroid concentrations in tissue could be detected. Spurious positives were seen in particular circumstances, but could be avoided. Probing of non-denatured samples was not as sensitive. Tubers became infected and PSTV was readily detected by PAGE in leaves of potato experimentally inoculated and maintained below 20°C, but the cDNA probe could not detect infection in tuber sprouts growing at 8–10°C in darkness. Otherwise similar green-leaved sprouts were faintly positive. Detection for all sprouts was unproblematic after movement to 25°C and light for 10 days. 相似文献
4.
马铃薯纺锤块茎类病毒株系鉴定 总被引：6，自引：0，他引：6
以加拿大的马铃薯纺锤块茎类病毒(Potato spindle tuber viroid,PSTV)强毒、中毒和弱毒株系样品作对照,用改进的往返-聚丙烯酰胺凝胶电泳方法,鉴定了发生在我国北方种植的马铃薯上的PSTV株系类型。从60个马铃薯品种488个样品中,所有检测到的PSTV的电泳迁移率与加拿大的弱毒株系迁移率相同。表明所有检测到的PSTV都属弱毒株系。首次明确发生在我国北方种植的马铃薯上的PSTV以弱毒株系为主要类型。没有分离到强毒株系或其它株系。 相似文献
5.
J. A. De Bokx P. G. M. Piron 《European journal of plant pathology / European Foundation for Plant Pathology》1981,87(2):31-34
Aulacorthum solani (Kaltenbach),Macrosiphum euphorbiae (Thomas) andMyzus persicae (Sulzer) were used for transmission experiments in laboratory and glasshouse. As inoculum served PSTV-containing tomato foliage and artificial diets containing purified PSTV. It is concluded thatM. euphorbiae can transmit PSTV in a non-persistent way.Samenvatting Aardappelspindelknolviroïde (PSTV) wordt tot een vrij nieuwe groep van pathogenen, de viroïden, gerekend. De ziekte, die er door wordt veroorzaakt, wordt sedert 1923 waargenomen in Noord-Amerika en is meer recentelijk ook aangetroffen in Afrika, Australië, Sowjet-Unie en Zuid-Amerika maar tot dusver niet in West-Europa.PSTV kan gemakkelijk mechanisch worden overgebracht. De overdracht door bladluizen was nog niet betrouwbaar vastgesteld. De bladluissoortenMyzus persicae (Sulzer),Aulacorthum solani (Kaltenbach) enMacrosiphum euphorbiae (Thomas) zijn daarom in overdrachtsproeven betrokken, waarbij als inoculum met PSTV geïnfecteerd blad en een door een membraan afgesloten gezuiverde PSTV-bevattende suspensie is gebruikt. Het laatstgenoemde type inoculum is gebruikt, om een mogelijke mechanische overdracht bij het overzetten van bladluizen van de viroïdebron naar de toetsplant tomaat cv. Sheyenne uit te sluiten. Er is vastgesteld, datM. euphorbiae PSTV op non-persistente wijze kan overbrengen. 相似文献
6.
Detection of chrysanthemum stunt and potato spindle tuber viroids by polyacrylamide gelelectrophoresis 总被引：1，自引：0，他引：1
W. H. M. Mosch H. Huttinga F. A. Hakkaart J. A. De Bokx 《European journal of plant pathology / European Foundation for Plant Pathology》1978,84(3):85-93
Stunt viroid can be detected in chrysanthemums with the polyacrylamide gelectrophoresis (PAGE) method developed by Morris and Smith (1977) for potato spindle tuber viroid. The time of sample preparation can even be shortened considerably. The reliability of the short and the complete PAGE method proved to be similar to that of the biological Mistletoe test in a parallel experiment. Combined samples can be tested in the complete PAGE method easily permitting the detection of one diseased chrysanthemum top in a total of ten.Although potato spindle tuber viroid is not known to occur in the Netherlands we searched for methods to detect possible infections. Artificial infections of tomato and potato plants and of sprouts of potato tubers could readily be detected by Morris and Smith's method. Using this method it was possible to demonstrate infections by severe and weak isolates even when not yet producing symptoms. In tomato plants the viroid could be detected four to eight days before symptoms appeared.Samenvatting Het dwergziekteviroïde (CSV) kon in chrysanten worden aangetoond met een door Morris en Smith (1977) voor het aardappelspindelknolviroïde (PSTV) ontwikkelde polyacrylamide-gelelektroforesemethode (PAGE). Het bereiden van de monsters voor elektroforese kon evenwel aanzienlijk worden vereenvoudigd. De volledige, evenals de korte PAGE-methode bleek even betrouwbaar als de biologische Mistletoe-toets. De PAGE-methode was zo gevoelig dat toepassing ervan op mengmonsters verantwoord is: één besmette top van een chrysantheplant in een totaal van tien kon nog betrouwbaar worden aangetoond.Howewel het PSTV niet in Nederland voorkomt, werden de mogelijkheden onderzocht om infecties met dit viroïde te kunnen vaststellen. Kunstmatige infecties met het viroïde in tomate- en aardappelplanten en in aardappelspruiten konden met de door Morris en Smith beschreven PAGE-methode worden aangetoond. Dit gold zowel voor sterke als voor zwakke isolaten, ook als ze geen symptomen veroorzaken. In tomaat kon met de PAGE-methode het PSTV al vier tot acht dagen vóór de symptomen verschenen worden aangetoond. 相似文献
7.
A comparison was made of methods for viroid detection. Molecular hybridization using cDNA is a very sensitive method that can handle large quantities of samples at the same time but it has the disadvantage that only small amounts of the sample can be applied to the nitrocellulose filter. The method therefore can only detect viroid in plants when its concentration is 10–20 ng g-1 of leaves, using 32P as a marker system. Bi-directional electrophoresis can detect viroid in plants when its concentration is 10 ng g-1 of leaves, because it uses larger samples. It does not need hazardous chemicals like 32P and formamide, and the reading of the results of the test is less liable to failures because it is based on two criteria (position and intensity of RNA band). The Dutch Plant Protection Service and the Dutch General Inspection Service for Ornamentals therefore use a modified bi-directional electrophoresis method to detect potato spindle tuber viroid and chrysanthemum stunt viroid, respectively. 相似文献
8.
Evidence of asexual recombination in Rhynchosporium secalis 总被引：3，自引：3，他引：0
Three single-spore isolates of Rhynchosporium secalis that differed in their α-esterase and β-glucosidase isozyme patterns were inoculated as two mixtures, each of two isolates, on to seedlings of the susceptible barley cultivar Maris Mink. Approximately 100 single-spore isolates were taken from mature lesions produced by each mixture. These were subjected to polyacrylamide gel electrophoresis and the gels were stained for α-esterase and β-glucosidase. Parental types only were produced by one of the isolate mixtures. However, one of the 10 lesions examined for the second mixture produced nine isolates with a novel combination of isozymes, indicating that some form of asexual recombination had occurred. The use of isozymes as a natural marker system for the detection in vivo of asexual recombination in pathogenic fungi is discussed. 相似文献
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12.
Frank Van Der Wilk Marja Korsman Frans Zoon 《European journal of plant pathology / European Foundation for Plant Pathology》1994,100(2):109-122
An assay, based on amplification of cDNA synthesized from genomic viral RNA, has been developed to detect tobacco rattle virus in infected plant material and viruliferous nematodes. A range of different TRV strains could be detected using the procedure developed. The presence of one to three viruliferous nematodes in a nematode suspension was sufficient for the detection of TRV. The minimum amount of purified virus detectable in the assay was 15 fg, indicating an increased sensitivity of the PCR-based assay as compared to serological detection methods, like ELISA. A dot-blot hybridization procedure was developed for the detection of the PCR products, making agarose gel electrophoresis dispensable. 相似文献
13.
黄瓜花叶病毒NASBA检测技术的建立 总被引：3，自引：0，他引：3
以香蕉花叶病病样为材料,初步建立了黄瓜花叶病毒核酸序列依赖性扩增(Nucleic acid sequence based amplifica-tion,NASBA)的检测技术。通过以香蕉叶片总RNA为模板,在黄瓜花叶病毒(Cucumber mosaic virus,CMV)亚组ⅠRNA 2高保守区设计特异引物,进行NASBA反应,经5%琼脂糖凝胶电泳检测,阳性样品中出现了预期大小为310 bp的条带,而阴性和空白对照中均未出现。并对11份香蕉样品分别进行NASBA反应,并经过斑点杂交验证与RT-PCR检测比较,两者的检测结果一致,灵敏度相当,检出限量可达100 pg。 相似文献
14.
Double-stranded RNA (dsRNA) associated with plum pox virus (PPV) in Nicotiana clevelandii and Prunus domestica has been isolated. While dsRNA was detected in N. clevelandii in considerable amounts by electrophoresis, only small amounts were found in P. domestica. This may be due to viscous substances in the leaves of this woody host. Different PPV strains (NAT - not aphid-transmissible; AT - aphid-transmissible) showed specific patterns in electrophoresis gels. When PPV was assayed in N. clevelandii by dsRNA detection or by standard ELISA or ISEM, all three methods were found to be efficient, with none being superior. ELISA, as a simple and fast routine method, is still the method of choice. DsRNA detection will be suitable for plant disease agents undetectable by ELISA and ISEM. 相似文献
15.
Isozyme variation of Hordeum murinum in Switzerland and test of hybridization with cultivated barley
Summary Variability between and within spontaneous populations of Hordeum murinum in Switzerland was studied by enzyme electrophoresis. Most of the variation (61.5%) occurred within populations, while 38.5% occurred between populations. Absence of cleistogamy was observed. The results suggest evidence for a mixed mating system in H. murinum . Isozyme diagnostic bands for H. murinum and cultivated barley were established, allowing the detection of putative hybrids between them. No hybrids were obtained after performing experimental hybridization in the field and in the greenhouse. None was detected in the progeny of H. murinum growing in spontaneous contact zones either, confirming the existence of strong genetic barriers against hybridization. Our results are discussed in the context of the risk of transgene escape, associated with the cultivation of transgenic crops. 相似文献
16.
Ralstonia solanacearum is a pathogenic bacterium that causes wilt in over 200 plant species. Here we report a rapid and sensitive detection of R. solanacearum using an isothermal method for copying DNA known as loop-mediated amplification (LAMP). A set of four primers was designed to replicate the gene coding for the flagellar subunit, fliC, and conditions for detection were optimized to complete in 60 min at 65 degrees C. Magnesium pyrophosphate resulting from the amplification reaction could be detected optically as an increase in the solution turbidity, and the DNA products spread in a reproducible ladder-like banding pattern after electrophoresis in an agarose gel. Replication of the fliC gene was detected only from R. solanacearum. The detection limit of this LAMP assay was between 10(4) to 10(6) colony forming units/ml, and the technique may be useful for developing rapid and sensitive detection methods for the R. solanacearum pathogen in soil and water. 相似文献
17.
免疫凝聚试纸条和TaqMan探针实时荧光PCR检测西瓜细菌性果斑病菌比较研究 总被引：7，自引：0，他引：7
以西瓜细菌性果斑病菌(Acidovorax avenae subsp.citrulli)菌悬液和田间采集的病组织为试材,研究了免疫凝聚试纸条和实时荧光PCR技术检测的灵敏度和适应性。结果表明,免疫凝聚试纸条检测灵敏度为106 cfu/mL,具有简便、快速、易操作特点,适用于田间快速检测和病害诊断;TaqMan探针实时荧光PCR检测灵敏度达103~4 cfu/mL,比传统PCR检测灵敏度(105 cfu/mL)提高了10~100倍,且不需要琼脂糖凝胶电泳、溴化乙锭染色和Southern杂交。但需要昂贵的仪器和试剂,适用于室内检测及相关研究。 相似文献
18.
A rapid DNA extraction and loop‐mediated isothermal amplification (LAMP) procedure was developed and evaluated for the detection of two specific groups of phytoplasmas from infected plant material. Primers based upon the 16–23S intergenic spacer (IGS) region were evaluated in LAMP assays for amplification of group 16SrI (aster yellows group) and group 16SrXXII (Cape St Paul wilt group) phytoplasma strains. DNA could be extracted from leaf material (16SrI phytoplasmas) or coconut trunk borings (16SrXXII phytoplasmas) onto the membranes of lateral flow devices, and small sections of these membranes were then added directly into the LAMP reaction mixture and incubated for 45 min at 65°C. Positive reactions were detected through the hydroxyl napthol blue colorimetric assay within 1 h of the start of DNA extraction, and were confirmed by subsequent agarose gel electrophoresis of the LAMP products. The level of detection was comparable to that obtained by nested PCR using conventional 16S rDNA phytoplasma‐specific primers. Furthermore, the assays were specific for the phytoplasmas they were designed to detect – the 16SrI assay only detected 16SrI phytoplasmas and not those from any other phylogenetic groups, whilst the 16SrXXII assay only detected 16SrXXII phytoplasmas. The DNA extractions and LAMP assay are easy to perform, requiring minimal equipment, and may therefore form the basis of a rapid and reliable field‐detection system for phytoplasmas. 相似文献
19.
采用磁性纳米微球增强信号的表面等离子体共振免疫传感系统检测水中莠去津残留 总被引：1，自引：0，他引：1
将磁性纳米微球(MNP,表面修饰羧基的磁性四氧化三铁微球)与表面等离子体共振(SPR)免疫传感技术结合,以莠去津单克隆抗体(AT-m Ab)与磁性纳米微球的偶联物(AT-m AbM NP)作为传感识别元件,初步建立了一种用于饮用水中除草剂莠去津残留检测的SPR信号增强免疫传感方法。通过对检测条件的优化,该方法对自来水中莠去津的检出限为0.89 ng/m L(S/N=3),检测范围为8.62~7.18×10~3ng/m L,检测时间小于20 min;在10~1 000 ng/m L添加水平内,莠去津的平均回收率为94%~102%,相对标准偏差(RSD)为5.1%~7.3%。磁性纳米微球的加入有效增强了SPR传感器的响应信号强度,提高了检测方法的灵敏度。本研究建立了一种快速、灵敏、准确的水中莠去津残留的检测方法,可为相应的现场检测技术和设备的研发提供技术基础。 相似文献
20.
W. H. M. Mosch H. Huttinga D. Z. Maat A. Treur 《European journal of plant pathology / European Foundation for Plant Pathology》1982,88(3):113-122
A standard test method for detecting viroids was designed, to be applied on imported plant material, for which a zero-tolerance exists in the Netherlands towards potato spindle tuber viroid (PSTV).Partial purification of nucleic acids after homogenizing leaf material with a Polytron homogenizer, followed by increasing the viroid concentration by inoculation of an intermediate tomato host, and complete purification of the small nucleic acids from the tops of these plants, followed by polyacrylamide gelectrophoretic analysis, proved successful. With this procedure, now used as a standard method, more samples could be handled than with other methods tested.Desalting by Sephadex filtration proved to be superior to dialysis. An attempt to develop a serological test for PSTV failed. Albinism, induced in PSTV-infected tomato plants by certain environmental conditions, was not of diagnostic value.
Samenvatting Voor het viroïde, dat de aardappelspindelknolziekte veroorzaakt (ASKV) geldt in Nederland een nultolerantie. Al het geïmporteerde aardappelmateriaal wordt daarom getoetst op het voorkomen van het viroïde. Voor dat doel is een betrouwbare en, zo mogelijk, ook snelle toets noodzakelijk, die niet alleen secundaire infecties maar ook jonge, primaire infecties kan aantonen.Een standaardmethode, die werd ontwikkeld, bleek zeer betrouwbaar, hoewel niet snel. Zij toont meer infecties aan dan snellere methoden die in het buitenland beschreven zijn. De toets omvat de volgende stappen: 2–5 g bladmateriaal wordt vermalen en op het homogenaat wordt een eenvoudige nucleïnezuurextractie en-concentratie toegepast. Dit preparaat wordt gebruikt om vier jonge tomatezaailingen te inoculeren. Door deze zaailingen 4 weken onder optimale omstandigheden te houden wordt het eventueel aanwezige viroïde vermeerderd. Geeft tenminste één van de tomateplanten symptomen, dan wordt het oorspronkelijke monster ziek verklaard. Vertoont geen van de vier tomateplanten symptomen dan wordt een nucleïnezuurextractie uitgevoerd van de topjes van deze planten. Kleine nucleïnezuurmoleculen worden geïsoleerd, geconcentreerd en tenslotte geanaliseerd met behulp van polyacrylamide gelelektroforese.Om overdracht van het ene naar het andere monster te voorkomen werd voor het vermalen gebruik gemaakt van verwisselbare schachten bij de Polytron homogenisator.Ontzouten van de nucleïnezuurextracten met Sephadexfiltratie gaf betere resultaten en was sneller uitvoerbaar dan dialyse.Pogingen om een specifiek antiserum tegen ASKV te maken zijn niet gelukt. Onder onze omstandigheden was het ook niet mogelijk om op een betrouwbare manier albinisme in geïnfecteerde planten te induceren als middel om infecties met ASKV op te sporen.相似文献