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1.
In studies on digestive processes and microorganisms in the gut of the common woodlouse, Porcellio scaber (Isopoda: Oniscidea), we observed marked contradictions between the activity of cellulolytic enzymes and the number of microorganisms. The anterior hindgut exhibited the highest cellulolytic activity, but was characterized by low microbial counts. Due to the presence of endosymbiotic bacteria in the midgut lobes that appear to produce cellulases, we suggest that the cellulases that are active in the hindgut of woodlice are of endogenous origin. Received: 4 April 1997  相似文献   

2.
《Applied soil ecology》2007,35(1):226-236
The gut of many soil arthropods contains a complex and mutualistic microbial community that usually assists the host with digestion. The same is probably true for earthworms, but the nature and function of the microbiota inhabiting their gut are virtually unknown. In this paper, we studied the microbial community in the gut content of the earthworm Lumbricus terrestris L. and in the bulk soil by assessing their fatty acid (FA) profiles. Our results indicated that the total FA concentration in the earthworm gut was about two orders of magnitude greater than in bulk soil, with higher concentration of bacteria (up to 500-fold), fungal and metazoan-derived FAs. Several FAs appearing in the gut were not present in bulk soil. PCA analysis revealed that the microbial community in the gut was different from that in the bulk soil, and that significant changes occurred between midgut, hindgut and proctodeum. Cluster analysis of bacterial and fungal-derived FA profiles grouped the bulk soil samples apart from the gut samples, where the hindgut profiles were more closely related to those from the proctodeum than those from the midgut. We showed important changes in the FA concentration and composition occurring at very small spatial scales inside the gut of the earthworm L. terrestris. These results have implications for understanding earthworm digestion, and they suggest that the microbial community in the earthworm gut is not a casual combination of microorganisms already present in the soil. Further study is needed to determine how these gut microbial communities are involved in earthworm digestion processes.  相似文献   

3.
Previous feeding experiments have shown that soil-feeding termites (Termitidae: Termitinae) preferentially mineralize the peptidic component of synthetic humic acids, but nothing was known about the mechanism involved in digestion. Here, we studied the hydrolysis of humus-stabilized peptides in gut extracts of Cubitermes orthognathus by measuring the release of radiolabel from 14C-peptide-labeled synthetic humic acids. Gut extracts exhibited proteolytic activity over a wide pH range (from 4 to 12) with a maximum at about pH 8. The highest activity was located in the gut section containing the midgut and the extremely alkaline (up to pH 12) mixed segment. Chemical hydrolysis at in situ pH (up to pH 12) was negligible. Proteolytic activity in the hindgut fluid was generally relatively low, but alkaline proteases dominated in the anterior hindgut. When compared to other alkaline proteases, the proteolytic activity of gut extracts had a higher alkali-stability and tolerance to humic acids than subtilisin and an alkaline protease of Streptomyces griseus. Gut extracts also hydrolyzed the peptidic component of synthetic humic acids more efficiently than the commercial enzymes. Together with previous results, this study strongly supports the hypothesis that soil-feeding termites mobilize and digest the peptidic component of organic nitrogen in soil humic substances by a combination of proteolytic activities and extreme alkalinity in their intestinal tract.  相似文献   

4.
Dipteran larvae play an important role in the soil of some deciduous forests. They can consume a considerable part of the annual litter fall and produce a large amount of faecal pellets, which are forming an important part of the fermentation horizon of forest soils. We measured the pH changes and assayed the activities and pH optima of saccharolytic enzymes in the digestive tracts of the larvae of Bibio pomonae and Penthetria holosericea (Bibionidae). The pH of the litter offered as a food was about 5. The gut content became highly alkaline (pH about 10) in the anterior part of the midgut and the pH decreased posteriorly and in the hindgut. Excrements were neutral or had slightly alkaline pH (7.5–8.0) in both species. The alkaline pH optima of amylase (9.5–10.0) and maltase (8.0), trehalase and cellobiase (7.0) were the same in both species. Saccharolytic activity showed an optimum at pH 7 in B. pomonae and at pH 8 in P. holosericea. Though there are previously published reports of high assimilation efficiency of bibionid larvae fed in litter (46–76% in B. pomonae), activities of both exo and endocellulases were below the detection limit of saccharolytic and chromolytic assays along a wide pH range (5–10). Possible explanations are discussed.  相似文献   

5.
Perennial plants are known to be one of the most influential parameters in desert ecosystems affecting microbial activity. In this study, we examined the importance of these perennial shrubs and attempted to determine the most influential factor that contributes the most to the ecosystem by separating the physical part and the organic contribution of perennial plants. The study site is located in the northern Negev Desert, Israel, where 50 Hammada scoparia shrubs and 50 artificial plants were randomly marked to be used as a tool for the above objectives. Soil samples were collected monthly in the vicinity of the canopies of both shrubs while control samples were collected from the open areas between the shrubs. All samples were collected from the upper (0–10 cm) and the deeper (10–20 cm) soil layers. The contribution to microbial activity was measured by evaluation of the microbial community functions in soil. The results of the research showed a trend of a strong influence of the perennial H. scoparia shrubs on microbial community function. The functional aspects of the microbial community that were measured were CO2 evolution, microbial biomass, microbial functional diversity, and the physiological profile of the community. High values for all parameters were observed under the vicinity of the H. scoparia shrubs, while the artificial plants were found to have a weaker effect on the community according to soil depth. The upper-soil layer at both locations (artificial plant canopy and control samples) showed higher values of the functioning parameters than that of the deeper soil layer. The results indicate the importance of the organic contribution (plant litter) in comparison to the physical part of desert shrubs.  相似文献   

6.
Summary Some physicochemical and biological measurements were carried out on the gut content and casts of Allolobophora molleri, an earthworm which lives in humid soils of Northern Spain. In the anterior part of the gut, water (22% of moist weight of soil) and soluble organic matter (27.4%) had been added to the ingested soil and pH had increased from 5.75 to 7.0. The amount of water-soluble compounds decreased sharply in the middle and posterior parts of the gut and were hardly detectable in control soil or casts. The average O2 consumption, measured at 28° and 21°C, indicated respectively 2.75-to 12-fold increases in microbial respiration in the gut content compared to the non-ingested soil. These results extend the hypothesis of a mutualistic digestion in earthworms previously proposed for tropical endogeic species.  相似文献   

7.
Most wildfires, even the most severe, burn at mixed intensities across a landscape, depending on local fuel loads, fuel moistures, and wind strength and direction. This heterogeneous patchwork of fire effects can influence the patterns of above- and belowground biotic recovery through altered environmental conditions, nutrient availability, and biotic sources for microbial and vegetative re-colonization. We quantified the effects of low- and high-severity fire 14 months post-burn on key environmental variables typically limiting to microbial activity. We characterized the soil microbial community structure through ester-linked fatty acid analysis (EL-FAME) and identified the soil environmental factors that best explain the pattern of microbial community profiles through canonical correspondence analysis (CCA). Low-severity burning caused no change in soil moisture, pH or temperature while high-severity burning caused an increase in soil moisture, temperature, and a decrease in pH levels, relative to the unburned sites. Soil respiration rates were significantly lower in both the low- and high-severity burn sites, relative to unburned sites, likely due to initial root and microbial death. Overall microbial biomass did not change with either low- or high-severity burning, but the microbial community ordination biplots showed separation of communities by fire, and slight separation by fire severity along three axes. This community separation was driven primarily by a decrease in fungal biomarkers (18:2ω6c, 18:3ω6c) with both low- and high-severity fire. Only 23% of the variation in the microbial community distribution could be explained by three environmental variables: soil pH, temperature, and carbon. These results suggest that the microbial communities in both the low- and high-severity burn sites are structurally different from the populations in the unburned sites.  相似文献   

8.
The diet of earthworms includes soil organic matter, soil microbes and other microfauna, but the relative contribution of these dietary components to earthworm nutrition is not well known. Analysis of fatty acid (FA) profiles can reveal trophic relationships in soil food webs, leading to a better understanding of the energy and nutrient flows from microbiota to earthworms. The objective of this study was to determine the origin of FAs assimilated by the earthworm Lumbricus terrestris L. We analysed the pattern of FAs in: (i) the bulk soil, (ii) soil in the earthworm gut, (iii) the absorptive tissue of the earthworm gut wall, and (iv) the muscular layers of the earthworm body wall. Multivariate analyses performed on the FA profiles suggest that the microbial community in the earthworm gut differs from that in bulk soil. Diverse bacterial and fungal derived FAs, which earthworms cannot synthesize, were found in the earthworm gut wall and body wall, and in the neutral lipids (storage lipids) of the gut wall. The major compounds isolated were 20:4ω6, 20:5ω3 and 18:2ω6, followed by the monoenoic 18:1ω7 and 18:1ω9c, and the saturated 18:0. The microbial FA assemblage in the gut wall resembled the gut soil more than the bulk soil, and the body wall of L. terrestris showed the same microbial derived FA pattern as the gut wall, although at reduced concentrations. We propose the existence of a specific microbial community in the earthworm gut that provides FAs to the earthworm. It appears that L. terrestris may derive more of its energy and nutrients from gut specific microbiota than from microbiota already present in the ingested soil, based on the trophic relationships revealed through FA analysis.  相似文献   

9.
We investigated tree species effects on the soil microbial community in the tropical montane forest on Mt. Kinabalu, in Malaysian Borneo. We investigated microbial composition (lipid profile) and soil physicochemical parameters (pH, moisture, total C, N and phenolics concentration) in top 5-cm soils underneath two conifers (Dacrycarpus imbricatus and Dacrydium gracilis) and three broad-leaves (Lithocarpus clementianus, Palaquium rioence and Tristaniopsis clementis). We found that the primary difference in microbial composition was between conifer versus broad-leaves. The abundance of specific microbial biomarker lipids correlated with soil pH, total C and N. We conclude that tree species have significant impacts on the soil microbial community through their effects on soil pH, total C and N.  相似文献   

10.
The effect of several bacterial-feeding nematodes of the Cephalobidae family (Zeldia punctata, Acrobeloides nanus and Cephalobus pseudoparvus) on the microbial community of a Sahelian soil (Senegal) was investigated in microcosm. The consequences of the activity of these nematodes on the growth and nitrogen nutrition of young maize plants (aerial biomass, root biomass and nitrogen content) were also estimated. Laboratory-cultured nematodes were inoculated into soil containing maize seedlings where the natural nematofauna had been previously eliminated by alternately freezing and defrosting (five cycles). The microbial compartment of the soil community was characterised through total microbial biomass (using fumigation-extraction), density of bacteria (using colony forming units counts), microbial activity (using alkaline phosphatase) and genetic structure of soil microbial community (using denaturing gradient gel electrophoresis) at sowing and at 12, 26 and 47 days after planting. Final nematode densities in the different treatments (between 4 and 20 Ind g−1 dry soil) demonstrated a high level of reproduction. The different types of nematodes tested induced similar trends in changes in the microbial pool of the soil and in maize seedling growth. Compared to control soils, the presence of nematodes led to an increase (+12%) in plant biomass and reduced concentrations of soil ammonium but had no effect on concentrations of nitrate by the end of the experiment. Sixty-three percent of the inorganic nitrogen initially present in the soil was incorporated into the maize plants with nematodes whereas only 47% was incorporated without nematodes. Nematode activity led to a significant decrease in microbial biomass (−28%) and density of cultivable bacteria (−55%), however, nematodes stimulated bacterial activity (+18%). The effects of Z. punctata were weakest compared to A. nanus and C. pseudoparvus. The presence of nematodes modified the genetic structure of the microbial community essentially by changing the relative abundance of dominant bacterial populations. Among nematode species tested, A. nanus modified the structure of the microbial communities the most compared with control soils without nematodes. Overall, results from this study provide evidence for the ability of microbial feeding nematodes to alter microbial activity, microbial community structure, nitrogen mineralisation and growth of maize seedlings in a Sahelian soil from Senegal, West Africa.  相似文献   

11.
Proteinases in the humus-feeding larva of Pachnoda ephippiata were partially purified and characterized. Proteinase activity from the midgut was alkali-stable and its pH optimum for activity was about pH 12. Nine proteolytic bands were visible on zymogram gels containing gelatin; one band of 19 kDa was dominant. P. ephippiata mainly employed serine proteinases for digestive proteolysis. The combination of strong midgut alkalinity and midgut proteinases with pronounced alkali stability, a high proteolytic activity on model humic acids, and a large tolerance to high humic acid concentrations would enable the P. ephippiata to gain nutrients from soil by digesting the proteinaceous component of soil humic substances.  相似文献   

12.
Microorganisms play a critical role in nutrient transformation, soil health and for sustaining the productivity of soils. Effects of long-term cropping, fertilization, manuring and their integration on microbial community were studied in soil samples from five long-term fertilizer experiments under various rainfed production systems in the semi-arid tropics (SAT) of India. Microbial population counts were analyzed by dilution plating and were in turn compared with different parameters such as soil treatments, soil type, soil microbial biomass C, soil organic C, rainfall and soil pH. The counts were high in treatments where combinations of organic and inorganic fertilizers were applied compared to control. Vertisols showed larger organic carbon levels than Alfisols. Fungal population was higher in acidic soils and in treatments under continuous inorganic fertilization treatments whereas a high number of bacteria were found in integrated use of organic and inorganic fertilizers. At most of the locations soil organic C and microbial biomass C showed significant positive (p ≤ 0.05) correlation with microbial populations. Thus, results suggest that even under arid and semi-arid tropical conditions, regular addition of nutrients in an integrated manner could improve soil organic carbon and microbial population counts. For each production system, better carbon sequestration management practices were identified.  相似文献   

13.
Bacteria from the food leaves and faeces of millipedes maintained in group cultures (12 animals) for 24 h were counted. Dilution plating and direct observation both showed significant increases in bacterial populations (10–100 fold) after passage through the gut. In cultures of single animals the increases were primarily the result of rapid growth in the midgut, though there was some evidence of further proliferation in the hindgut and faeces. The ratio of viable counts to direct counts was lower in litter than in the gut and faeces, suggesting that the gut environment enhanced bacterial growth and viability. Correlation between counts from guts and food leaves further indicated that the growth response was by the litter microflora and not indigenous gut symbionts.  相似文献   

14.
从常年堆放的腐质豆秆中分离到1组产纤维素酶菌群MO,并在50℃、pH8.0条件下培养,90h时达到最高酶活,活性为1.3611IU。该酶最适反应温度为60℃,pH为7.0,在60℃以下和pH3~8范围内具有良好的热稳定性和pH稳定性。在最适反应条件下,该酶的最高活性可达2.13IU。通过生长动力学研究了菌群内部不同生长阶段pH、酶活和失重率的相互关系,并通过非变性电泳对酶谱进行初步研究,得到7条活性条带,说明MO中具有多种产酶菌株。  相似文献   

15.
To explore long-term impact of organic and inorganic fertilizers on microbial communities, we targeted both the total bacterial community and the autotrophic ammonia oxidizing bacteria (AOB) in soil from six treatments at an experimental field site established in 1956: cattle manure, sewage sludge, Ca(NO3)2, (NH4)2SO4, unfertilized and unfertilized without crops. All plots, except the bare fallows, were cropped with maize. Effects on activity were assessed by measuring the basal respiration and substrate induced respiration (SIR) rates, and the potential activity of the AOB. To determine the bacterial community composition, 16S rRNA genes were used to fingerprint total soil communities by terminal restriction fragment length polymorphism analysis and AOB communities by denaturing gradient gel electrophoresis. The fertilization regimes had clear effects on both activity and composition of the soil communities. Basal respiration and r, which was kinetically derived as the exponentially growing fraction of the SIR-response, correlated well with the soil organic C content (r=0.93 and 0.66, respectively). Soil pH ranged from 3.97 to 6.26 in the treatments and was found to be an important factor influencing all microbial activities. pH correlated negatively with the ratio between basal respiration and SIR (r=0.90), indicating a decreased efficiency of heterotrophic microorganisms to convert organic carbon into microbial biomass in the most acid soils with pH 3.97 and 4.68 ((NH4)2SO4 and sewage sludge fertilized plots, respectively). The lowest SIR and ammonia oxidation rates were also found in these treatments. In addition, these treatments exhibited individually different community fingerprints, showing that pH affected the composition of AOB and total bacterial communities. The manure fertilized plots harbored the most diverse AOB community and the pattern was linked to a high potential ammonia oxidation activity. Thus, the AOB community composition appeared to be more strongly linked to the activity than the total bacterial communities were, likely explained by physiological differences in the populations present.  相似文献   

16.
We addressed the mechanistic basis for a negative correlation between soil pH and phosphomonoesterase activity, often found in various soils. Also in the present study, a significant negative correlation was observed between soil pH and phosphomonoesterase activity measured at pH 6.5 in Japanese acidic forest soils (3 Inceptisols, 3 non-allophanic Andisols, and 2 allophanic Andisols). A hypothesis that higher activity of phosphomonoesterase in acid forest soils results from increased synthesis of phosphomonoesterase by microorganisms in response to P limitation was tested. Soils with lower pH showed a lower optimum pH for phosphomonoesterase activity and greater activity at the optimum pH than other soils. To assess nutrient limitations of the soil microbial community, the effects of addition of C, N, or P on phosphomonoesterase and dehydrogenase activities, which is an intracellular enzyme and the activity of which reflects overall microbial activity, were examined in the soil samples. Addition of P increased dehydrogenase activity in some forest soils. Also, microorganisms in some soils were co-limited by C, N, and P. Response ratios (RR) of phosphomonoesterase and dehydrogenase activities in P-amended soil to their activity in non-amended soil were used to evaluate the response of soil microorganisms to P limitation. The ratio of RR-dehydrogenase to RR-phosphomonoesterase was strongly correlated with phosphomonoesterase activity at the optimum pH (P < 0.01). The results indicate that P limitation accounts for higher phosphomonoesterase activity in the more acid forest soils.  相似文献   

17.
Key physicochemical factors associated with microbial community composition and functions in Australian agricultural soils were identified. Soils from seven field sites, with varying long-term agricultural management regimes, were characterised physicochemically, on the basis of their bacterial and fungal community structures (using PCR-DGGE), and by assessing potential catabolic functions (MicroResp?). Soil type, rather than agricultural management practice, was the key determinant of microbial community structure and catabolic function (P<0.05). Following multivariate analysis, soil pH was identified as the key habitat-selective physicochemical soil property associated with variation in biological diversity and profiles of organic substrate utilisation. In particular, the capacity of soils to catabolise different C-substrates was closely correlated (ρ=0.604, P=0.001) to pH. With decreasing pH, the catabolism of common low molecular weight organic compounds (especially cysteine and aspartic acid) declined, however catabolism of two others (lysine and arginine) increased. Shifts in the capacity of soil microbiota to cycle common organic compounds have implications for overall geochemical cycling of C and N in acidifying soils. The genetic structure of the bacterial communities in soil strongly correlated with pH (ρ=0.722; P=0.001) and that of soil fungi with pH and % sand (ρ=0.323; P=0.006). Catabolic function was more closely associated with the structure of the bacterial than fungal communities. This work has shown that soil pH is a primary driver of microbial diversity and function in soil. Agricultural management practices thereby act to selectively shift populations and functions against this background.  相似文献   

18.
This study was designed to examine whether or not specific tree species (Picea glauca, Picea mariana, Pinus banksiana, Populus tremuloides), their post-fire stand age, or their position in a successional pathway had any significant effect on the functional diversity of associated soil microbial communities in a typical mixed boreal forest ecosystem (Duck Mountain Provincial Forest, Manitoba, Canada). Multivariate analyses designed to identify significant biotic and/or abiotic variables associated with patterns of organic substrate utilization (assessed using the BIOLOG™ System) revealed the overall similarity in substrate utilization by the soil microbial communities. The five clusters identified differed mainly by their substrate-utilization value rather than by specific substrate utilization. Variability in community functional diversity was not strongly associated to tree species or post-fire stand age; however, redundancy analysis indicated a stronger association between substrate utilization and successional pathway and soil pH. For example, microbial communities associated with the relatively high pH soils of the P. tremuloides-P. glauca successional pathway, exhibited a greater degree of substrate utilization than those associated with the P. banksiana-P. mariana successional pathway and more acidic soils. Differences in functional diversity specific to tree species were not observed and this may have reflected the mixed nature of the forest stands and of their heterogeneous forest floor. In a densely treed, mixed boreal forest ecosystem, great overlap in tree and understory species occur making it difficult to assign a definitive microbial community to any particular tree species. The presence of P. tremuloides in all stand types and post fire stand ages has probably contributed to the large amount of overlap in utilization profiles among soil samples.  相似文献   

19.
The impact of detritivorous earthworms (Eisenia andrei) on microbial community structure and function in grape marc, a lignocellulosic enriched plant residue, was investigated in a mesocosm experiment. Analysis of carbon and nitrogen pools was also carried out in order to evaluate how changes in microbial communities affect plant residue decomposition. The grape marc was completely processed after fifteen days as a result of the high density of earthworms present and the rapid gut transit time. Eisenia andrei had a large impact on the structure of the microbial community, as revealed by phospholipid fatty acid analysis. Earthworm activity reduced the abundance of both bacterial (except for Gram-negative bacteria) and fungal PLFA biomarkers relative to the control values. Decreases in microbial activity and in protease and cellulase activities were also attributable to the presence of earthworms. Moreover, earthworms strongly modified the substrate utilization patterns of microbial communities, as revealed by BIOLOG analysis. The presence of earthworms led to an increase in the utilization of some amino acids and polymers, which reached a higher substrate diversity value than that in the control mesocosm. The differences in microbial communities were accompanied by a reduction in the total C content and the labile C pool, relative to the control, although there were no significant differences in either cellulose or hemicellulose contents. However, total N content increased in both mesocosms – with and without earthworms – and the concentration of NH4+ was also enhanced by earthworm activity. The results indicate that detritivorous earthworms play a key role in decomposing fresh plant residues in the short term via their intensive interactions with microbial communities.  相似文献   

20.
Understanding the survival and persistence of Escherichia coli in soil with different microbial composition is essential for the accuracy of water quality assessment and microbial source tracking. This microcosm experiment was conducted to investigate the survival pattern of three E. coli strains (originated from soil, dog feces and human feces, separately) in soil with modified microbial community composition. Bile salt No. 3 (BS3) of progressively increased density (0.05%, 0.15%, 0.30% and 0.50%) was added into sandy loam soils and incubated for 90 days. Laboratory cultured E. coli were then inoculated into soil and incubated for another 150 days to monitor their survival pattern. Change of bacterial community diversity by BS3 was detected by both cultivation based and cultivation independent (PCR-Denaturing Gradient Gel Electrophoresis) methods. In general, progressively increased BS3 concentration resulted in decreased CFU counts both at 10 days and 90 days incubation. DGGE analysis indicated only a slight change in bacterial community composition at 10 days but a significant change at 90 days. Cluster analysis suggested that BS3 treatment grouped separately from controls. Survival of E. coli in soil was significantly influenced by the complexity of the microbial community, as die-off rate of E. coli progressively declined with the reduction of microbial community diversity. Differential survival of E. coli under different soil microbial stress highlights the importance of incorporating biotic factors in predictive models for water quality management and microbial source tracking study.  相似文献   

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