Context

Scale dependence of bat habitat selection is poorly known with few studies evaluating relationships among landscape metrics such as class versus landscape, or metrics that measure composition or configuration. This knowledge can inform conservation approaches to mitigate habitat loss and fragmentation.

Objectives

We evaluated scale dependence of habitat associations and scaling patterns of landscape metrics in relation to bat occurrence or capture rate in forests of southwestern Nicaragua.

Methods

We captured 1537 bats at 35 locations and measured landscape and class metrics across 10 spatial scales (100–1000 m) surrounding capture locations. We conducted univariate scaling across the 10 scales and identified scales and variables most related to bat occurrence or capture rate.

Results

Edge and patch density, at both landscape and class levels, were the most important variables across species. Feeding guilds varied in their response to metrics. Certain landscape and configuration metrics were most influential at fine (100 m) and/or broad (1000 m) spatial scales while most class and composition metrics were influential at intermediate scales.

Conclusions

These results provide insight into the scale dependence of habitat associations of bat species and the influence of fine and broad scales on habitat associations. The effects of scale, examined in our study and others from fine (100 m) to broad (5 km) indicate habitat relationships for bats may be more informative at larger scales. Our results suggest there could be general differences in scale relationships for different groups of landscape metrics, which deserves further evaluation in other taxonomic groups.

Context

A recent hypothesis, the habitat amount hypothesis, predicts that the total amount of habitat in the landscape can replace habitat patch size and isolation in studies of species richness in fragmented landscapes.

Objectives

To test the habitat amount hypothesis by first evaluating at which spatial scale the relationship between species richness in equal-sized sample quadrats and habitat amount was the strongest, and then test the importance of spatial configuration of habitat—measured as local patch size and isolation—when habitat amount was taken into account.

Methods

A quasi-experimental setup with 20 habitat patches of dry calcareous grasslands varying in patch size, patch isolation and habitat amount at the landscape scale was established in the inner Oslo fjord, Southern Norway. We recorded species richness of habitat specialists of vascular plants in equal-sized sample quadrats and analysed the relationship between species richness, habitat amount in the landscape and patch size and isolation.

Results

Although the total amount of habitat in a 3 km-radius around the local patch was positively related to species richness in the sample quadrats, local patch size had an additional positive effect, and the effect of patch size was higher when the amount of habitat within the 3 km-radius was high than when it was low.

Conclusions

In our study system of specialist vascular plants in dry calcareous grasslands, we do not find support for the habitat amount hypothesis.

Context

Conservation planning for at-risk species requires understanding of where species are likely to occur, how many individuals are likely to be supported on a given landscape, and the ability to monitor those changes through time.

Objectives

We developed a distribution model for northern spotted owls that incorporates both habitat suitability and probability of territory occupancy while accounting for interspecies competition.

Methods

We developed range-wide habitat suitability maps for two time periods (1993 and 2012) for northern spotted owls that accounted for regional differences in habitat use and home range size. We used these maps for a long-term demographic monitoring study area to assess habitat change and estimate the number of potential territories based on available habitat for both time periods. We adjusted the number of potential territories using known occupancy rates to estimate owl densities for both time periods. We evaluated our range-wide habitat suitability model using independent survey data.

Results

Our range-wide habitat maps predicted areas suitable for territorial spotted owl presence well. On the demographic study area, the amount of habitat declined 19.7% between 1993 and 2012, while our estimate of the habitat-based carrying capacity declined from 150 to 146 territories. Estimated number of occupied territories declined from 94 to 57.

Conclusions

Conservation and recovery of at-risk species depends on understanding how habitat changes over time in response to factors such as wildfire, climate change, biological invasions, and interspecies competition, and how these changes influence species distribution. We demonstrate a model-based approach that provides an effective planning tool.

Context

In heterogeneous landscapes, local patterns of community structure are a product of the habitat size and condition within a patch interacting with adjacent habitat patches of varying composition and quantity. While evidence for local versus landscape factors have been found in terrestrial biomes, support for such multi-scale effects shaping marine ecological communities is equivocal.

Objectives

We investigated whether within-patch habitat condition can override seascape context to explain the community structure of macroalgae-associated reef fishes across a tropical seascape.

Methods

We mapped the distribution and abundance of a diverse family of reef fishes (Labridae) occupying macroalgae meadows within a tropical reef ecosystem, and using best-subsets model selection, investigated the potential for habitat structural connectivity and/or local habitat quality for predicting variations in fish community structure across the seascape.

Results

Local habitat quality (canopy structure, hard habitat complexity) and area of coral-dominated habitat within 500 m of a macroalgal meadow provided the best predictors of fish community structure. However, the specific importance of a given predictor varied with fish life history stage and functional trophic group. Interestingly, macroalgae meadow area was among the least important predictors.

Conclusions

Given the complex interplay between local habitat quality and spatial context effects on fish biodiversity, our study reveals the multi-scale predictors that should be used in spatial conservation and management approaches for tropical fish diversity. Moreover, our findings question the ubiquity of habitat area effects in patchy landscapes, and cautions against a sole reliance on habitat quantity in spatial management.

Purpose

Wildlife conservation requires understanding how landscape context influences habitat selection at spatial scales broader than the territory or habitat patch.

Objectives

We assessed how landscape composition, fragmentation, and disturbance affected occurrence and within-season site-fidelity of a declining grassland songbird species (Henslow’s Sparrow, Ammodramus henslowii).

Methods

Our study area encompassed eastern Kansas (USA) and North America’s largest remaining tracts of tallgrass prairie. We conducted 10,292 breeding-season point-count surveys over 2 years, and related occurrence and within-season site-occupancy dynamics of sparrows to landscape attributes within 400-, 800-, and 1600-m radii.

Results

Sparrows inhabited < 1% of sites, appearing and disappearing locally within and between breeding seasons. Early in spring, sparrows responded to landscape attributes most strongly within 400-m radii, settling in areas containing > 50% unburned prairie. Later in summer, sparrows responded to landscape attributes most strongly within 800-m radii, settling in areas containing > 50% unfragmented prairie, including sites burned earlier the same year. Sparrows avoided landscapes containing woody vegetation, disappeared from hayfields after mowing, and were most likely to inhabit landscapes containing Conservation Reserve Program (CRP) fields embedded within rangeland.

Conclusions

Landscape context influenced habitat selection at spatial scales broader than both the territory and habitat patch. Protecting contiguous prairies from agricultural conversion and woody encroachment, promoting CRP enrollment, and maintaining portions of undisturbed prairie in working rangelands each year are critical to reversing the conservation crisis in North America’s remaining grasslands. As landscape change alters natural areas worldwide, effective conservation requires suitable conditions for threatened species at multiple spatial scales.

Context

Scale is the lens that focuses ecological relationships. Organisms select habitat at multiple hierarchical levels and at different spatial and/or temporal scales within each level. Failure to properly address scale dependence can result in incorrect inferences in multi-scale habitat selection modeling studies.

Objectives

Our goals in this review are to describe the conceptual origins of multi-scale habitat selection modeling, evaluate the current state-of-the-science, and suggest ways forward to improve analysis of scale-dependent habitat selection.

Methods

We reviewed more than 800 papers on habitat selection from 23 major ecological journals published between 2009 and 2014 and recorded a number of characteristics, such as whether they addressed habitat selection at multiple scales, what attributes of scale were evaluated, and what analytical methods were utilized.

Results

Our results show that despite widespread recognition of the importance of multi-scale analyses of habitat relationships, a large majority of published habitat ecology papers do not address multiple spatial or temporal scales. We also found that scale optimization, which is critical to assess scale dependence, is done in less than 5 % of all habitat selection modeling papers and less than 25 % of papers that address “multi-scale” habitat analysis broadly defined.

Conclusions

Our review confirms the existence of a powerful conceptual foundation for multi-scale habitat selection modeling, but that the majority of studies on wildlife habitat are still not adopting multi-scale frameworks. Most importantly, our review points to the need for wider adoption of a formal scale optimization of organism response to environmental variables.

Context

The species–area relationship (SAR) is the most ubiquitous scaling relationship in ecology, yet we still do not know how different aspects of scale affect this relationship. Scale is defined by grain, extent, and focus. Focus here pertains to whether patches or landscapes are used to derive SARs.

Objective

To explore whether altering the focal scale influences the resulting SAR. If the SAR is scale-invariant, patch-based and landscape-based SARs should be congruent.

Methods

I fit a power-law function (S = cA ^z) to arthropod data obtained from an experimental landscape system, in which habitat amount and configuration (clumped vs. fragmented) of red clover (Trifolium pratense) varied among plots (256 m²). The scaling coefficient (z) was compared among patch-based and landscape-based SARs for congruence.

Results

Patches gained species at a faster rate than landscapes (z = 0.37 vs. 0.26, respectively), producing domains of incongruity in the SAR. Landscape richness (S _L) was greater than patch richness (S _P) below 30 % habitat, but S _P > S _L above 60 % habitat. Landscape configuration contributed to this incongruity below 30 % habitat (fragmented S _L > clumped S _L), but landscape context (whether the largest patch was embedded in a fragmented or clumped landscape) was important above 60 % habitat for understanding the SAR in this domain.

Conclusions

Landscape configuration exerts both direct (<30 % habitat) and indirect (>60 % habitat) effects on the SAR. Because patch-based and landscape-based SARs may not be congruent, we should exercise care when extrapolating from patches to landscapes to make inferences about the effects of habitat loss and fragmentation on species richness.

Context

Spatial scale is an important consideration for understanding how animals select habitat, and multi-scalar designs in resource selection studies have become increasingly common. Despite this, examination of functional responses in habitat selection at multiple scales is rare. The perceptual range of an animal changes as a function of vegetation association, suggesting that use, selection and functional responses may all be habitat- and scale-dependent.

Objectives

Our objective was to determine how varying grain size affects our interpretation of functional response in habitat selection and to elucidate scalar and landscape effects on habitat selection.

Methods

We quantified the functional response of GPS-collared, female white-tailed deer (Odocoileus virginianus, n = 18) in Riding Mountain National Park, Canada, to different habitat types. Functional responses were quantified at multiple spatial scales by regressing proportion of habitat used against proportion of habitat available at different buffer radii (ranging from 75–1000 m radius) surrounding used (telemetry) locations and available points within the individual’s seasonal home range. We examined how functional responses changed as a function of grain by plotting grain size against the slope of the functional response.

Results

We detected functional responses in most habitat types. As expected, functional responses tended to converge towards 1 (use proportional to availability) at large buffer sizes; however, the relationship between scale and functional response was typically non-linear and depended on habitat type.

Conclusions

We conclude that a multi-scalar approach to modelling animal functional responses in habitat selection is important for understanding patterns in animal behaviour and resource use.

Context

Interactions between landscape-scale processes and fine-grained habitat heterogeneity are usually invoked to explain species occupancy in fragmented landscapes. In variegated landscapes, however, organisms face continuous variation in micro-habitat features, which makes necessary to consider ecologically meaningful estimates of habitat quality at different spatial scales.

Objectives

We evaluated the spatial scales at which forest cover and tree quality make the greatest contribution to the occupancy of the long-horned beetle Microplophorus magellanicus (Coleoptera: Cerambycidae) in a variegated forest landscape.

Methods

We used averaged data of tree quality (as derived from remote sensing estimates of the decay stage of single trees) and spatially independent pheromone-baited traps to model the occurrence probability as a function of multiple cross-scale combinations between forest cover and tree quality (with scales ranging between 50 and 400 m).

Results

Model support and performance increased monotonically with the increasing scale at which tree quality was measured. Forest cover was not significant, and did not exhibit scale-specific effects on the occurrence probability of M. magellanicus. The interactive effect between tree quality and forest cover was stronger than the independent (additive) effects of tree quality and particularly forest cover. Significant interactions included tree quality measured at spatial scales ≥200 m, but cross-scale interactions occurred only in four of the seven best-supported models.

Conclusions

M. magellanicus respond to the high-quality trees available in the landscape rather than to the amount of forest per se. Conservation of viable metapopulations of M. magellanicus should consider the quality of trees at spatial scales >200 m.

Context

Habitat complexity in rivers is linked to dynamic fluvial conditions acting at various spatial scales. On regulated rivers in the western United States, tributaries are regions of high energy and disturbance, providing important resource inputs for riparian ecosystems.

Objectives

This study investigated spatial patterns and extents of tributary influence on riparian habitat complexity in the near channel zone along regulated reaches of the Colorado (>?200 km) and Dolores Rivers (~?300 km) in the western United States. Because tributary confluences are regions of increased dynamism, we hypothesized that: (1) geomorphic and land cover complexity would be greatest close to tributary junctions and decrease with distance from tributaries; and (2) patterns in complexity would vary across different sized spatial units.

Methods

Using a combination of remote sensing and spatial analysis, we classified fluvial features and land cover classes to investigate patterns longitudinally at 10-, 25-, and 100-m spatial units in the near channel zone of two regulated rivers.

Results

Using change point analysis and randomization tests, we detected shifts in riparian habitat complexity closer to tributary junctions. Patterns varied across 10-, 25-, and 100-m spatial units in the near channel zone, with significance (p?≤?0.05) recorded for 10- and 25-m spatial units.

Conclusions

Tributary junctions deliver critical resource inputs on regulated systems, providing for increased geomorphic and land cover diversity upstream and downstream of tributaries. We found that patterns of response were non-linear and discontinuous, varying across spatial units and potentially influenced by the degree of mainstem flow regulation.

Context

Species site-occupancy patterns may be influenced by habitat variables at both local and landscape scales. Although local habitat variables influence whether the site is suitable for a given species, the broader landscape context can also influence site occupancy, particularly for species that are sensitive to land-use change.

Objectives

To examine the relative importance of local versus landscape variables in explaining site occupancy of eight bat species within the Brazilian Cerrado, a Neotropical savanna that is experiencing widespread habitat loss and fragmentation.

Methods

Bats were surveyed within 16 forest patches over two years. We used a multi-model information-theoretic approach, adjusted for species detection bias, to assess whether landscape variables (percent cover and number of patches of natural vegetation within a 2- and 8-km radius of each forest site) or local site variables (canopy cover, understory height, number of trees, and number of lianas) best explained site occupancy in each species.

Results

Landscape variables were among the best models (ΔAIC_c or ΔQAIC_c < 2) for four species (top-ranked model for black myotis), whereas local variables were among the best for five species (top-ranked model for vampire bats). Neither local nor landscape variables explained site occupancy in two frugivorous species.

Conclusion

Species associated with a particular habitat type will not respond similarly to the amount, distribution or relative suitability of that habitat, or even at the same scale. This reinforces the challenge of species distribution modelling, especially in the context of forecasting species’ responses to future land-use or climate-change scenarios.

Context

Quantifying gene flow in natural populations is a key topic in both evolutionary and conservation biology. Understanding the extent to which the landscape matrix facilitates or impedes gene flow is becoming a high priority in a context of worldwide habitat loss and fragmentation.

Objectives

Unexpectedly, a lower genetic diversity and a higher genetic structure have been previously observed in the less fragmented and the most forested habitat across four pine marten (Martes martes) populations in France. Our aim was to quantify the effect of landscape on the spatial distribution of genetic diversity in two populations in contrasting habitats.

Methods

We conducted an individual-based landscape genetics analysis in a highly fragmented rural plain (Bresse, n = 126) and in a highly forested (50 %) mountainous area (Ariège, n = 88) in France. We tested for isolation-by-resistance using least-cost distances and used a causal modeling approach on 16,384 landscape and 104 elevation resistance scenarios.

Results

Landscape structure influenced the genetic differentiation in Bresse, with vegetation providing more genetic connectivity over the study area than open areas, while roads and human buildings showed unexpected low resistance to gene flow. In Ariège, genetic differentiation was mainly associated with changes in elevation, with an optimal elevation for gene flow of around 1700 m, likely associated with changes in vegetation structure.

Conclusions

The pine marten seems to be able to cope with human-dominated landscapes and with fragmented forest landscapes, whereas elevation is the major driver of genetic differentiation in our mountainous landscape. Additionally, we highlight the importance of spatial replication in landscape genetics for deriving reliable conservation and management measures over the species distribution.

Context

The spatial distribution of non-substitutable resources implies diverging predictions for animal movement patterns. At broad scales, animals should respond to landscape complementation by selecting areas where resource patches are close-by to minimize movement costs. Yet at fine scales, central place effects lead to the depletion of patches that are close to one another and that should ultimately be avoided by consumers.

Objectives

We developed a multi-scale resource selection framework to test whether animal movement is driven by landscape complementation or resource depletion and identify at which spatial scale these processes are relevant from an animal’s perspective.

Methods

During the dry season, surface water and forage are non-substitutable resources for African elephants. Eight family herds were tracked using GPS loggers in Hwange National Park, Zimbabwe. We explained habitat selection during foraging trips by mapping surface water at two scales with gaussian kernels of varying widths placed over each waterhole.

Results

Unexpectedly, elephants select areas with low waterhole density at both fine scales (< 1 km) and broad scales (5–7 km). Selection is stronger when elephants forage far away from water, even more so as the dry season progresses.

Conclusions

Elephant selection of low waterhole density areas suggests that resource depletion around multiple central places is the main driver of their habitat selection. By identifying the scale at which animals respond to waterhole distribution we provide a template for water management in arid and semi-arid landscapes that can be tailored to match the requirements and mobility of free ranging wild or domestic species.

Context

Distribution and connectivity of suitable habitat for species of conservation concern is critical for effective conservation planning. Capercaillie (Tetrao urogallus), an umbrella species for biodiversity conservation, is increasingly threatened because of habitat loss and fragmentation.

Objective

We assessed the impact of drastic changes in forest management in the Carpathian Mountains, a major stronghold of capercaillie in Europe, on habitat distribution and connectivity.

Methods

We used field data surveys with a forest disturbance dataset for 1985–2010 to map habitat suitability, and we used graph theory to analyse habitat connectivity.

Results

Climate, topography, forest proportion and fragmentation, and the distance to roads and settlements best identified capercaillie presence. Suitable habitat area was 7510 km² in 1985; by 2010, clear-cutting had reduced that area by 1110 km². More suitable habitat was lost inside protected areas (571 km²) than outside (413 km²). Habitat loss of 15 % reduced functional connectivity by 33 % since 1985.

Conclusions

Forest management, particularly large-scale clear-cutting and salvage logging, have substantially diminished and fragmented suitable capercaillie habitat, regardless of the status of forest protection. Consequently, larger areas with suitable habitat are now isolated and many patches are too small to sustain viable populations. Given that protection of capercaillie habitat would benefit many other species, including old-growth specialists and large carnivores, conservation actions to halt the loss of capercaillie habitat is urgently needed. We recommend adopting policies to protect natural forests, limiting large-scale clear-cutting and salvage logging, implementing ecological forestry, and restricting road building to reduce forest fragmentation.

Context

Hoverflies are often used as bio-indicators for ecosystem conservation, but only few studies have actually investigated the key factors explaining their richness in woodlands.

Objectives

In a fragmented landscape in southwest France, we investigated the joint effects of woodland area, structural heterogeneity, connectivity and history on the species richness of forest-specialist hoverflies, and whether there was a time lag in the response of hoverflies to habitat changes, and tested the effect of spatiotemporal changes.

Methods

Current species richness was sampled in 48 woodlands using 99 Malaise traps. Structural variables were derived from a rapid habitat assessment protocol. Old maps and aerial photographs were used to extract past and present spatial patterns of the woodlands since 1850. Relationships between species richness and explanatory variables were explored using generalized linear models.

Results

We show that current habitat area, connectivity, historical continuity and the average density of tree-microhabitats explained 35 % of variation in species richness. Species richness was affected differently by changes in patch area between 1979 and 2010, depending on woodland connectivity. In isolated woodlands, extinction debt and colonization credit were revealed, showing that even several decades are not sufficient for hoverflies to adapt to landscape-scale habitat conditions.

Conclusions

These findings emphasise the importance of maintaining connectedness between woodlands, which facilitates the dispersion in a changing landscape. Our results also highlight the benefits of using a change-oriented approach to explain the current distribution patterns of species, especially when several spatial processes act jointly.

Context

Infectious diseases are important in the dynamics of many wildlife populations, but there is limited understanding of how landscape change influences susceptibility to disease.

Objectives

We aimed to quantify the time-delayed influence of spatial and temporal components of landscape change and climate variability on the prevalence of chlamydiosis in koala (Phascolarctos cinereus) populations in southeast Queensland, Australia.

Methods

We used data collected over 14 years (n = 9078 records) from a koala hospital along with time-lagged measures of landscape change and rainfall to conduct spatial and temporal analyses of the influence of landscape and environmental variables on prevalence of chlamydiosis and koala body condition.

Results

Areas with more suitable habitat were associated with higher levels of disease prevalence and better body condition, indicating that koalas were less likely to be impacted by chlamydiosis. More intact landscapes with higher proportions of total habitat are associated with a reduction in prevalence of chlamydiosis and a decrease in body condition. Increased annual rainfall contributed to a decrease in prevalence of chlamydiosis and an increase in body condition. Urbanization was associated with an increase in disease, however the effects of urban landscape change and climate variability on chlamydiosis may not manifest until several years later when overt disease impacts the population via effects upon body condition and reproductive success.

Conclusions

Our study highlights the importance of effects of landscape change and climate variability on disease prevalence in wildlife. This recognition is essential for long-term conservation planning, especially as disease often interacts with other threats.

Context

Playa wetlands are the primary habitat for numerous wetland-dependent species in the Southern Great Plains of North America. Plant and wildlife populations that inhabit these wetlands are reciprocally linked through the dispersal of individuals, propagules and ultimately genes among local populations.

Objective

To develop and implement a framework using network models for conceptualizing, representing and analyzing potential biological flows among 48,981 spatially discrete playa wetlands in the Southern Great Plains.

Methods

We examined changes in connectivity patterns and assessed the relative importance of wetlands to maintaining these patterns by targeting wetlands for removal based on network centrality metrics weighted by estimates of habitat quality and probability of inundation.

Results

We identified several distinct, broad-scale sub networks and phase transitions among playa wetlands in the Southern Plains. In particular, for organisms that can disperse >2 km a dense and expansive wetland sub network emerges in the Southern High Plains. This network was characterized by localized, densely connected wetland clusters at link distances (h) >2 km but <5 km and was most sensitive to changes in wetland availability (p) and configuration when h = 4 km, and p = 0.2–0.4. It transitioned to a single, large connected wetland system at broader spatial scales even when the proportion of inundated wetland was relatively low (p = 0.2).

Conclusions

Our findings suggest that redundancy in the potential for broad and fine-scale movements insulates this system from damage and facilitates system-wide connectivity among populations with different dispersal capacities.

Context

An increasing number of studies have investigated the impact of environmental heterogeneity on faunal assemblages when measured at multiple spatial scales. Few studies, however, have considered how the effects of heterogeneity on fauna vary with the spatial scale at which the response variable is characterised.

Objectives

We investigated the relationship between landscape properties in a region characterised by diverse fire mosaics, and the structure and composition of avian assemblages measured at both the site- (1 ha) and landscape-scale (100 ha).

Methods

We surveyed birds and calculated spatial landscape properties in sub-tropical woodlands of central Queensland, Australia.

Results

Environmental heterogeneity, as measured by topographic complexity, was consistently important for bird species richness and composition. However, the explanatory power of topographic complexity varied depending on the spatial scale and the component of diversity under investigation. We found different correlates of richness within particular foraging guilds depending on the scale at which richness was measured. Extent of long-unburnt habitat (>10 years since fire) was the most important variable for the landscape-scale richness of frugivores, insectivores and canopy feeders, whereas environmental heterogeneity in the surrounding landscape was more important for site-scale richness of these foraging guilds.

Conclusions

The response of species richness to landscape characteristics varies among scales, and among components of diversity. Thus, depending on the scale at which a biodiversity conservation goal is conceptualised—maximising richness at a site, or across a landscape—different landscape management approaches may be preferred.

Context

In deserts, many plant species exhibit a patchy spatial distribution within a harsh habitat matrix, where the likelihood of propagule dispersal among patches is uncertain, but may be promoted by landscape corridors or dispersal vectors.

Objectives

We examine the connectivity of a representative desert plant species (Acacia (Senegalia) greggii), and the ability of three major factors (animal dispersal agents, water flow along dry-washes, and climate) to facilitate dispersal within four watersheds in the Mojave National Preserve.

Methods

We genotyped 323 individuals sampled across 22 one-hectare sites using ten nuclear microsatellite markers.

Results

A hierarchical AMOVA revealed no significant differentiation among watersheds (F _RT = 0.00, P > 0.10), and very little genetic structure among all sites (F _ST = 0.03, P < 0.001), indicating regional connectivity. Mantel tests indicated distance along dry-washes best explained genetic distance between sites (r = 0.47, P < 0.05) when compared to Euclidean distance (P > 0.05), a distance measure based on rodent dispersal (P > 0.05), and a distance measure avoiding inhospitable climate (P > 0.05). An AIC comparison of generalized linear models found that within site genetic diversity (H _E and allelic richness) and average relatedness were best explained by slope (which increases seed dispersal potential via water flow) and area of the upstream watershed (which determines the number of potential seed donors), rather than plant density or habitat suitability.

Conclusions

Together, these findings indicate that dry-washes are key landscape features that enhance dispersal and regional connectivity in this patchy desert plant.

Context

Land use change and forest degradation have myriad effects on tropical ecosystems. Yet their consequences for low-order streams remain very poorly understood, including in the world´s largest freshwater basin, the Amazon.

Objectives

Determine the degree to which physical and chemical characteristics of the instream habitat of low-order Amazonian streams change in response to past local- and catchment-level anthropogenic disturbances.

Methods

To do so, we collected field instream habitat (i.e., physical habitat and water quality) and landscape data from 99 stream sites in two eastern Brazilian Amazon regions. We used random forest regression trees to assess the relative importance of different predictor variables in determining changes in instream habitat response variables.

Results

Multiple drivers, operating at multiple spatial scales, were important in determining changes in the physical habitat and water quality of the sites. Although we found few similarities in modelled relationships between the two regions, we observed non-linear responses of specific instream characteristics to landscape change; for example 20 % of catchment deforestation resulted in consistently warmer streams.

Conclusions

Our results highlight the importance of local riparian and catchment-scale forest cover in shaping instream physical environments, but also underscore the importance of other land use changes and activities, such as road crossings and upstream agriculture intensification. In contrast to the property-scale focus of the Brazilian Forest code, which governs environmental regulations on private land, our results reinforce the importance of catchment-wide management strategies to protect stream ecosystem integrity.