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1.
We determined the habitat usage and habitat connectivity of juvenile Chinook (Oncorhynchus tshawytscha) and coho (Oncorhynchus kisutch) salmon in continental shelf waters off Washington and Oregon, based on samples collected every June for 9 yr (1998–2006). Habitat usage and connectivity were evaluated using SeaWiFS satellite‐derived chlorophyll a data and water depth. Logistic regression models were developed for both species, and habitats were first classified using a threshold value estimated from a receiver operating characteristic curve. A Bernoulli random process using catch probabilities from observed data, i.e. the frequency of occurrence of a fish divided by the number of times a station was surveyed, was applied to reclassify stations. Zero‐catch probabilities of yearling Chinook and yearling coho salmon decreased with increases in chlorophyll a concentration, and with decreases in water depth. From 1998 to 2006, ～ 47% of stations surveyed were classified as unfavorable habitat for yearling Chinook salmon and ～ 53% for yearling coho salmon. Potentially favorable habitat varied among years and ranged from 9 856 to 15 120 km2 (Chinook) and from 14 800 to 16 736 km2 (coho). For both species, the smallest habitat area occurred in 1998, an El Niño year. Favorable habitats for yearling Chinook salmon were more isolated in 1998 and 2005 than in other years. Both species had larger and more continuous favorable habitat areas along the Washington coast than along the Oregon coast. The favorable habitats were also larger and more continuous nearshore than offshore for both species. Further investigations on large‐scale transport, mesoscale physical features, and prey and predator availability in the study area are necessary to explain the spatial arrangement of juvenile salmon habitats in continental shelf waters.  相似文献   

2.
Competitive interactions with non‐native species can have negative impacts on the conservation of native species, resulting in chronic stress and reduced survival. Here, juvenile Atlantic salmon (Salmo salar) from two allopatric populations (Sebago and LaHave) that are being used for reintroduction into Lake Ontario were placed into semi‐natural stream tanks with four non‐native salmonid competitors that are established in Ontario streams: brown trout (S. trutta), rainbow trout (Oncorhynchus mykiss), Chinook salmon (O. tshawytscha) and coho salmon (O. kisutch). Brown trout and rainbow trout reduced the survival and fitness‐related traits of Atlantic salmon, whereas Chinook salmon and coho salmon had no impact on these traits. These data support theories on ecological niche overlap and link differences in observed aggression levels with competitive outcomes. Measurements of circulating hormones indicated that the Atlantic salmon were not chronically stressed nor had a change in social status at the 10‐month time point in the semi‐natural stream tanks. Additionally, the Sebago population was better able to coexist with the non‐native salmonids than the LaHave population. Certain populations of Atlantic salmon may thus be more suitable for some environments of the juvenile stream phase for the reintroduction into Lake Ontario.  相似文献   

3.
This study examined whether rapid recovery from stress-induced impairment in predator evasion, observed in previous studies on coho salmon, Oncorhynchus kisutch (Walbaum), was a general characteristic of different stocks of the same species and different species of Pacific salmon. We monitored stress-induced non-predator mortality, predator evasion and Cortisol concentrations of smolts of coho and spring Chinook, O. tshawytscha (Walbaum), after administration of standardized single and multiple handling stresses. Marked differences in the response to handling stress among stocks of coho and spring chinook smolts were evident, with recovery from impaired predator evasion occurring within 24 h of a 30-s handling stress for coho smolts and 24 h of a 1-min handling stress for spring chinook smolts. Differences in stress-induced non-predator mortality among stocks were also observed. The results point to the importance of screening hatchery salmonid stocks to assess differing capabilities of dealing with stress.  相似文献   

4.
Michigan's fisheries rely primarily upon the hatchery propagation of salmonid fish for release in public waters. One limitation on the success of these efforts is the presence of bacterial pathogens, including Aeromonas salmonicida, the causative agent of furunculosis. This study was undertaken to determine the prevalence of A. salmonicida in Michigan fish, as well as to determine whether biochemical or gene sequence variability exists among Michigan isolates. A total of 2202 wild, feral and hatchery‐propagated fish from Michigan were examined for the presence of A. salmonicida. The examined fish included Chinook salmon, Oncorhynchus tshawytscha (Walbaum), coho salmon, O. kisutcha (Walbaum), steelhead trout, O. mykiss (Walbaum), Atlantic salmon, Salmo salar L., brook trout, Salvelinus fontinalis (Mitchill), and yellow perch, Perca flavescens (Mitchill). Among these, 234 fish yielded a brown pigment‐producing bacterium that was presumptively identified as A. salmonicida. Further phenotypic and phylogenetic analyses identified representative isolates as Aeromonas salmonicida subsp. salmonicida and revealed some genetic and biochemical variability. Logistic regression analyses showed that infection prevalence varied according to fish species/strain, year and gender, whereby Chinook salmon and females had the highest infection prevalence. Moreover, this pathogen was found in six fish species from eight sites, demonstrating its widespread nature within Michigan.  相似文献   

5.
Yearling Chinook (Oncorhynchus tshawytscha) and coho salmon (Oncorhynchus kisutch) were sampled concurrently with physical variables (temperature, salinity, depth) and biological variables (chlorophyll a concentration and copepod abundance) along the Washington and Oregon coast in June 1998–2008. Copepod species were divided into four different groups based on their water‐type affinities: cold neritic, subarctic oceanic, warm neritic, and warm oceanic. Generalized linear mixed models were used to quantify the relationship between the abundance of these four different copepod groups and the abundance of juvenile salmon. The relationships between juvenile salmon and different copepod groups were further validated using regression analysis of annual mean juvenile salmon abundance versus the mean abundance of the copepod groups. Yearling Chinook salmon abundance was negatively correlated with warm oceanic copepods, warm neritic copepods, and bottom depth, and positively correlated with cold neritic copepods, subarctic copepods, and chlorophyll a concentration. The selected habitat variables explained 67% of the variation in yearling Chinook abundance. Yearling coho salmon abundance was negatively correlated with warm oceanic copepods, warm neritic copepods, and bottom depth, and positively correlated with temperature. The selected habitat variables explained 40% of the variation in yearling coho abundance. Results suggest that copepod communities can be used to characterize spatio‐temporal patterns of abundance of juvenile salmon, i.e., large‐scale interannual variations in ocean conditions (warm versus cold years) and inshore‐offshore (cross‐shelf) gradients in the abundance of juvenile salmon can be characterized by differences in the abundance of copepod species with various water mass affinities.  相似文献   

6.
Obtaining reliable estimates of marine survival is essential for understanding anadromous salmon population dynamics. Two common approaches to estimating marine survival are (a) dividing abundance of returning adult salmon abundance by abundance of smolts from the same cohort, or (b) tagging a portion of the migrating smolts and estimating the return rate of tagged adults. This study compared these two approaches to estimating marine survival for coho salmon, Oncorhynchus kisutch (Walbaum), across multiple years in three California streams. Abundance‐based survival estimates were higher than tag‐based estimates; average estimates for the two techniques differed from 1.5‐fold to 7.4‐fold across streams. One likely cause for these divergent estimates is migration of juveniles from natal habitat before smolt trapping begins, resulting in an underestimate of smolt abundance and an overestimate of marine survival rate for the abundance‐based method. Estimates of marine survival obtained from abundance estimates and tag returns are not directly comparable.  相似文献   

7.
Abstract Many habitat enhancement techniques aimed at restoring salmonid populations have not been comprehensively assessed. The growth and diet of juvenile Chinook salmon, Oncorhynchus tshawytscha (Walbaum), rearing in a reach designed to enhance spawning were evaluated to determine how a non‐target life stage fared in the engineered habitat. Prior work demonstrated differences in food web structure between restored and unenhanced reaches of the Merced River, thus juvenile salmon feeding dynamics were also hypothesised to vary. Dependent variables were compared among fish collected from within and near the upper boundary of the restored reach and in an unenhanced habitat upstream. Diets, otolith‐derived growth and stable isotope‐inferred trophic positions were compared. Baetidae mayflies were particularly important prey in the restored reach, while elsewhere individuals exhibited heterogeneous diets. Salmon residing at the bottom of the restored reach exhibited slightly faster growth rates relative to fish collected elsewhere, although stable isotope and diet analyses suggested that they fed at a relatively low trophic position. Specialised Baetis predation and/or abundant interstitial refugia potentially improved rearing conditions in the restored reach. Data suggest that gravel enhancement and channel realignment designed to augment adult spawning habitat may simultaneously support juvenile Chinook salmon despite low invertebrate food resources.  相似文献   

8.
Little is known about the food habits of juvenile Chinook (Oncorhynchus tshawytscha) and coho (Oncorhynchus kisutch) salmon in marine environments of Alaska, or whether their diets may have contributed to extremely high marine survival rates for coho salmon from Southeast Alaska and much more modest survival rates for Southeast Alaskan Chinook salmon. To address these issues, we documented the spatial and temporal variability of diets of both species collected from marine waters of Southeast Alaska during summers of 1997–2000. Food habits were similar: major prey items of both species included fishes, crab larvae, hyperiid amphipods, insects, and euphausiids. Multivariate analyses of diet composition indicated that the most distinct groups were formed at the smallest spatial and temporal scales (the haul), although groups also formed at larger scales, such as by month or habitat type. Our expectations for how food habits would influence survival were only partially supported. As predicted, Southeast Alaskan coho salmon had more prey in their stomachs overall [1.8% of body weight (BW)] and proportionally far fewer empty stomachs (0.7%) than either Alaskan Chinook (1.4% BW, 5.1% empty) or coho salmon from other regions. However, contrary to our expectations, coho salmon diets contained surprisingly few fish (49% by weight). Apparently, Alaskan coho salmon achieved extremely high marine survival rates despite a diet consisting largely of small, less energetically‐efficient crustacean prey. Our results suggest that diet quantity (how much is eaten) rather than diet quality (what is eaten) is important to marine survival.  相似文献   

9.
We used the average fork length of age‐3 returning coho (Oncorhynchus kisutch) and age‐3 ocean‐type and age‐4 stream‐type Chinook (Oncorhynchus tshawytscha) salmon along the northeast Pacific coast to assess the covariability between established oceanic environmental indices and growth. These indices included the Multivariate El Niño‐Southern Oscillation Index (MEI), Pacific Decadal Oscillation (PDO), Northern Oscillation Index, and Aleutian Low Pressure Index. Washington, Oregon, and California (WOC) salmon sizes were negatively correlated with the MEI values indicating that ultimate fish size was affected negatively by El Niño‐like events. Further, we show that the growth trajectory of WOC salmon was set following the first ocean winter. Returning ocean‐type British Columbia‐Puget Sound Chinook salmon average fork length was positively correlated with the MEI values during the summer and autumn of return year, which was possibly a result of a shallower mixed layer and improved food‐web productivity of subarctic Pacific waters. Size variation of coho salmon stocks south of Alaska was synchronous and negatively correlated with warm conditions (positive PDO) and weak North Pacific high pressure during ocean residence.  相似文献   

10.
We examined 1454 juvenile Chinook salmon, Oncorhynchus tshawytscha (Walbaum), captured in nearshore waters off the coasts of Washington and Oregon (USA) from 1999 to 2004 for infection by Renibacterium salmoninarum, Nanophyetus salmincola Chapin and skin metacercariae. The prevalence and intensities for each of these infections were established for both yearling and subyearling Chinook salmon. Two metrics of salmon growth, weight residuals and plasma levels of insulin-like growth factor-1, were determined for salmon infected with these pathogens/parasites, both individually and in combination, with uninfected fish used for comparison. Yearling Chinook salmon infected with R. salmoninarum had significantly reduced weight residuals. Chinook salmon infected with skin metacercariae alone did not have significantly reduced growth metrics. Dual infections were not associated with significantly more severe effects on the growth metrics than single infections; the number of triple infections was very low and precluded statistical comparison. Overall, these data suggest that infections by these organisms can be associated with reduced juvenile Chinook salmon growth. Because growth in the first year at sea has been linked to survival for some stocks of Chinook salmon, the infections may therefore play a role in regulating these populations in the Northeast Pacific Ocean.  相似文献   

11.
Ceratomyxa shasta is a myxozoan parasite of salmonid fish. In natural communities, distinct genotypes of the parasite are associated with different salmonid hosts. To test the hypothesis that genotypes of C. shasta cause differential mortality, the polychaete host was experimentally infected with different parasite genotypes. Genotype I was obtained from Chinook salmon, Oncorhynchus tshawytscha, and genotype II from either coho salmon, O. kisutch, or rainbow trout, O. mykiss, We then challenged four salmonid strains: Chinook and coho salmon that occur in sympatry with the parasite and allopatric Chinook salmon and rainbow trout. Parasite genotype I caused mortality only in Chinook strains, although mortality in the allopatric strain also occurred from exposure to genotype II. A second experiment demonstrated that genotype II could be separated into two biotypes based on differential mortality in rainbow trout and coho salmon. These differential patterns of mortality as a result of infection by certain genotypes of C. shasta support field observations and suggest a co‐evolutionary relationship between these parasites and their hosts.  相似文献   

12.
No gold standard assay exhibiting error‐free classification of results has been identified for detection of Renibacterium salmoninarum, the causative agent of salmonid bacterial kidney disease. Validation of diagnostic assays for R. salmoninarum has been hindered by its unique characteristics and biology, and difficulties in locating suitable populations of reference test animals. Infection status of fish in test populations is often unknown, and it is commonly assumed that the assay yielding the most positive results has the highest diagnostic accuracy, without consideration of misclassification of results. In this research, quantification of R. salmoninarum in samples by bacteriological culture provided a standardized measure of viable bacteria to evaluate analytical performance characteristics (sensitivity, specificity and repeatability) of non‐culture assays in three matrices (phosphate‐buffered saline, ovarian fluid and kidney tissue). Non‐culture assays included polyclonal enzyme‐linked immunosorbent assay (ELISA), direct smear fluorescent antibody technique (FAT), membrane‐filtration FAT, nested polymerase chain reaction (nested PCR) and three real‐time quantitative PCR assays. Injection challenge of specific pathogen‐free Chinook salmon, Oncorhynchus tshawytscha (Walbaum), with R. salmoninarum was used to estimate diagnostic sensitivity and specificity. Results did not identify a single assay demonstrating the highest analytical and diagnostic performance characteristics, but revealed strengths and weaknesses of each test.  相似文献   

13.
Chinook salmon, Oncorhynchus tshawytscha (Walbaum), is an important biological and cultural resource in Alaska, but knowledge about Chinook salmon ecology is limited in many regions. From 2009 to 2012, spawning distribution and abundance of a northern Chinook salmon population on the Togiak River in south‐west Alaska were assessed. Chinook salmon preferred deeper mainstem channel spawning habitat, with 12% (14 of 118 tags in 2009) to 21% (22 of 106 tags in 2012) of radio‐tagged fish spawning in smaller order tributaries. Tributary spawners tended to have earlier run timing than mainstem spawners. Chinook salmon exhibited extended holding and backout (entering freshwater but returning to saltwater before completing anadromous migration) behaviours near the mouth of Togiak River, potentially prolonging their exposure to fishery harvest. Mark–recapture total annual run estimates (2010–2012) ranged from 11 240 (2011) to 18 299 (2012) fish. Exploitation of Chinook salmon ranged from 36% (2012) to 55% (2011) during the study period, with incidental fishery catches near the mouth of the river comprising the largest source of harvest.  相似文献   

14.
Abstract. A rickettsia-like organism (RLO) was isolated from infected coho salmon, Oncorhynchus kisutch (Walbaum), in cultures from six fish cell lines, but could not be cultured on 41 artificial media. The organism was confirmed by Koch's postulates as the aetiological agent of a systemic disease causing signifieant mortality among coho in Chile. The organism was a Gram-negative, obligate intracellular pathogen frequently observed within intracyto-plasmic vacuoles or inclusions of host cells, and appears to belong to the order Rickettsiales, family Rickettsiaceae and possibly the tribe Ehrlichiae. The organism, as well as the clinical signs and pathology it produces, is described. The disease, originally observed only in coho raised in seawater net pens, was reproduced experimentally in fish in both freshwater and seawater aquaria. Horizontal transmission without parasite vectors was observed in fish in both aquaria. The organism was shown, for the first time, to cause disease and mortality in Atlantic, Salmo salar L., and Chinook, O. tshawytscha (Walbaum), salmon and rainbow trout, O. mykiss (Walbaum). Because of the systemic nature of the disease, it is proposed that it be called 'salmonid rickettsial septicaemia'.  相似文献   

15.
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16.
Abstract  Stable isotope analysis was used to determine trophic position and the relative contributions of terrestrial-derived carbon (TDC) and marine-derived carbon for Chinook, Oncorhynchus tshawytscha (Walbaum), pink, Oncorhynchus gorbuscha (Walbaum), and chum, Oncorhynchus keta (Walbaum) salmon fry in near-shore marine habitats. Chum fry were enriched in δ 13C relative to pink fry, and enriched in δ 15N relative to both Chinook and pink fry. Between 5.5 and 39.7% of the carbon in the three species was TDC. The TDC was higher in chum fry (28.7 ± 4% SD) than in pink fry (24.9 ± 4.4% SD), but TDC did not differ between Chinook fry (27.8 ± 9.5% SD) and either chum or pink fry. The fry of these three species of Pacific salmon may form a trophic hierarchy with chum fry occupying the highest trophic position and the three species may also partition resources according to carbon source.  相似文献   

17.
This research was initiated in conjunction with a systematic, multiagency surveillance effort in the United States (U.S.) in response to reported findings of infectious salmon anaemia virus (ISAV) RNA in British Columbia, Canada. In the systematic surveillance study reported in a companion paper, tissues from various salmonids taken from Washington and Alaska were surveyed for ISAV RNA using the U.S.‐approved diagnostic method, and samples were released for use in this present study only after testing negative. Here, we tested a subset of these samples for ISAV RNA with three additional published molecular assays, as well as for RNA from salmonid alphavirus (SAV), piscine myocarditis virus (PMCV) and piscine orthoreovirus (PRV). All samples (n = 2,252; 121 stock cohorts) tested negative for RNA from ISAV, PMCV, and SAV. In contrast, there were 25 stock cohorts from Washington and Alaska that had one or more individuals test positive for PRV RNA; prevalence within stocks varied and ranged from 2% to 73%. The overall prevalence of PRV RNA‐positive individuals across the study was 3.4% (77 of 2,252 fish tested). Findings of PRV RNA were most common in coho (Oncorhynchus kisutch Walbaum) and Chinook (O. tshawytscha Walbaum) salmon.  相似文献   

18.
In 2017, a PCR‐based survey for Piscine orthoreovirus‐3 (PRV‐3) was conducted in wild anadromous and non‐anadromous salmonids in Norway. In seatrout (anadromous Salmo trutta L.), the virus was present in 16.6% of the fish and in 15 of 21 investigated rivers. Four of 221 (1.8%) Atlantic salmon (Salmo salar L.) from three of 15 rivers were also PCR‐positive, with Ct‐values indicating low amounts of viral RNA. All anadromous Arctic char (Salvelinus alpinus L.) were PCR‐negative. Neither non‐anadromous trout (brown trout) nor landlocked salmon were PRV‐3 positive. Altogether, these findings suggest that in Norway PRV‐3 is more prevalent in the marine environment. In contrast, PRV‐3 is present in areas with intensive inland farming in continental Europe. PRV‐3 genome sequences from Norwegian seatrout grouped together with sequences from rainbow trout (Oncorhynchus mykiss Walbaum) in Norway and Coho salmon (Oncorhynchus kisutch Walbaum) in Chile. At present, the origin of the virus remains unknown. Nevertheless, the study highlights the value of safeguarding native fish by upholding natural and artificial barriers that hinder introduction and spread, on a local or national scale, of alien fish species and their pathogens. Accordingly, further investigations of freshwater reservoirs and interactions with farmed salmonids are warranted.  相似文献   

19.
Experimental evidence suggests that olfactory imprinting by salmon occurs during a sensitive period associated with surges in plasma thyroxine (T4) levels during smolting. Life-history studies, however, suggest that imprinting may occur prior to smolting. A possible resolution of this paradox may lie in the finding that exposure of coho salmon, Oncorhynchus kisutch (Walbaum) smolts to novel water sources induced transient increases in plasma T4 levels. If novel water-induced T4 surges occur prior to smolting and T4 surges are required for olfactory imprinting, juvenile salmon experiencing novel water sources as they move through their watershed may learn olfactory waypoints (e.g. stream confluences). To test this hypothesis, we exposed subyearling coho salmon, Oncorhynchus kisutch (Walbaum), to novel odours or water sources at distinct developmental stages. Subyearlings did not demonstrate dramatic increases in plasma T4 levels during smolting and exposure to novel water sources also had no effect on basal T4 levels. Previous studies have indicated that such coho smolts successfully imprint to similar exposure paradigms and home accurately. These results suggest that surges in plasma T4 levels during smolting may not be necessary for olfactory imprinting and accurate homing.  相似文献   

20.
In the last 9 years, epizootics of an icterus condition has affected coho salmon, Oncorhynchus kisutch (Walbaum), reared in seawater cages in southern regions of Chile. At necropsy, fish from field cases exhibited signs of jaundice accompanied by pale light-brown livers and dark spleens. Histopathological and haematological results indicated that these fish presented haemolytic anaemia. After microbiological examination no bacterial or viral agents could be identified as aetiological agents of this disease. In an infectivity trial, coho salmon, Atlantic salmon, Salmo salar L., and rainbow trout, Oncorhynchus mykiss (Walbaum), were inoculated intraperitoneally with a filtrate of an organ homogenate (0.45 microm) from a diseased coho salmon and held for 60 days in tanks supplied with fresh water. The disease was only reproduced in coho salmon in which mortalities, beginning at day 23 post-inoculation (p.i.), reached a cumulative value of 24% at day 27 p.i. This condition was transmitted to non-inoculated cohabiting coho salmon suggesting that it is a waterborne disease. Thus, this icteric condition is caused by an infectious form of haemolytic anaemia, probably of viral aetiology, and coho salmon are more susceptible than either Atlantic salmon or rainbow trout.  相似文献   

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