Species-specific DNA markers for identification of two root-knot nematodes of coffee: Meloidogyne arabicida and M. izalcoensis     

Valdir Ribeiro Correa  Marcilene Fernandes Almeida dos Santos  Maria Ritta Alves Almeida  José Ricardo Peixoto  Philippe Castagnone-Sereno  Regina Maria Dechechi Gomes Carneiro 《European journal of plant pathology / European Foundation for Plant Pathology》2013,137(2):305-313

Seven root-knot nematodes (RKN), including Meloidogyne exigua, M. incognita, M. paranaensis, M. enterolobii, M. arabicida, M. izalcoensis and M. arenaria are major pathogens of coffee crop in the Americas. Species-specific primers for their identification have been developed for five of them and constitute a fast and reliable method of identification. Here we report a PCR-based assay for specific detection of M. arabicida and M. izalcoensis. Random Amplified Polymorphic DNA fragments specific for these two species were converted into sequence characterized amplified region (SCAR) markers. PCR amplification using the SCAR primers produced a specific fragment of 300 bp and 670 bp for M. arabicida and M. izalcoensis, respectively, which were absent in other coffee-associated Meloidogyne spp. tested. SCAR primers also allowed successful amplification of DNA from single second-stage juveniles (J2), males and females. In addition, these primers were able to unambiguously detect the target species in nematode suspensions extracted from soil and roots samples, in different isolates of the same species or when used in multiplex PCR reactions containing mixtures of species. These results demonstrated the effectiveness of these SCAR markers and their multiplex use with those previously developed for M. exigua, M. incognita, M. paranaensis, M. enterolobii and M. arenaria constitute an essential detection tool. This diagnostic kit will contribute for specific J2 identification of the major RKN infecting coffee from field samples in the Americas.  相似文献   

A 15-year study on the treatment of undernourished children at a nutrition rehabilitation centre (CREN), Brazil     

Fernandes MB  López RV  de Albuquerque MP  Marchesano AC  Clemente AP  Martins VJ  Sawaya AL 《Public health nutrition》2012,15(6):1108-1116

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Phytochemical Profile,Antioxidant and Cytotoxic Activities of the Carob Tree (<Emphasis Type="Italic">Ceratonia siliqua</Emphasis> L.) Germ Flour Extracts     

Custódio L  Escapa AL  Fernandes E  Fajardo A  Aligué R  Alberício F  Neng N  Nogueira JM  Romano A 《Plant foods for human nutrition (Dordrecht, Netherlands)》2011,66(1):78-84

This work aimed to evaluate the phytochemical content and to determine the antioxidant and cytotoxic activities of methanol extracts of the carob tree (Ceratonia siliqua L.) germ flour. The extracts were rich in phenolic compounds, had considerable antioxidant activity, and reduced the viability of cervical (HeLa) cancer cells. The chemical content and the biological activities of the extracts were significantly affected by gender and cultivar. Female cultivar Galhosa had the highest levels of phenolic compounds, and the highest antioxidant activity. Extracts from the hermaphrodite trees and from the female cultivars Galhosa and Costela/Canela exhibited the highest cytotoxic activity. The most abundant compound was theophylline. The phenolic content was correlated to both antioxidant and cytotoxic activities. Our findings provide new knowledge about the health implications of consuming food supplemented with carob germ flour.  相似文献   

Field validation of chlordecone soil sequestration by organic matter addition     

Florence Clostre  Thierry Woignier  Luc Rangon  Paula Fernandes  Alain Soler  Magalie Lesueur-Jannoyer 《Journal of Soils and Sediments》2014,14(1):23-33

Purpose

The use of chlordecone (CLD) has caused pollution of soils, which are now a source of contamination for crops and ecosystems. Because of its long-term impacts on human health, exposure to CLD is a public health concern and contamination of crops by CLD must be limited. To this end, we conducted field trials on chlordecone sequestration in soil with added compost.

Materials and methods

The impact of added compost on chlordecone sequestration was measured in nitisols. After characterization of the soil, the transfer of chlordecone from soil to water was assessed in a leaching experiment and from soil to two crop plants in a nitisol plot. Finally, to understand the underlying processes, changes in CLD content were measured in soil fractions and soil porous properties were assessed after the addition of compost.

Results and discussion

A rapid seven-fold decrease in water extractable CLD was observed in amended soils. Five percent amendment led to a significant reduction in the contamination of crops by CLD; edible radish tubers were 50% more contaminated without added compost and cucumber fruits were 60% more contaminated. After the addition of compost, CLD content increased in the fraction of pre-humified or partially mineralized organic debris. Finally, in contrast to andosols, adding compost to nitisols did not affect the soil microstructure.

Conclusions

Increasing chlordecone sequestration by adding compost could be an alternative solution until soil decontamination techniques become available. This could be a provisional way to control further release of CLD from contaminated soils towards other environmental compartments.  相似文献   

Effect of the Medium Replacement Interval on the Viability,Growth and In Vitro Maturation of Isolated Caprine and Ovine Pre‐Antral Follicles     

DM Magalhães  DD Fernandes  MBS Mororó  CMG Silva  GQ Rodrigues  JB Bruno  MHT Matos  CC Campello  JR Figueiredo 《Reproduction in domestic animals》2011,46(1):134-140

The aim of the present study was to evaluate the effects of different medium replacement intervals on the viability, antral cavity formation, growth and in vitro maturation (IVM) of oocytes from caprine and ovine pre‐antral follicles. Pre‐antral ovarian follicles (≥150 μm) were isolated from the ovarian cortex of goats and sheep and were individually cultured for 24 days using two different medium replacement intervals [2 days (T₁) or 6 days (T₂)]. Follicle development was evaluated on the basis of antral cavity formation, increases in follicular diameter and the presence of healthy cumulus oocyte complexes and fully grown oocytes. For caprine species, results showed a higher percentage (p < 0.05) of viable follicles in T₁ than T₂ from day 6 until the end of the culture. In addition, when comparing both treatments after the same culture duration, the rate of antrum formation was significantly higher in T₁ than in T₂ from day 12 onwards. Yet, in ovines, when both treatments were compared on day 24 of the culture, there were more viable follicles in T₂ than in T₁ (p < 0.05). In the caprine species, percentages of fully grown oocytes (≥110 μm) acceptable for IVM after 24 days of culture were significantly higher in normal follicles cultured in T₁ (30.0%) than in T₂ (6.7%; p < 0.05). On the other hand, in ovines, at the end of the culture, the percentage of oocytes destined for IVM was higher in T₂ than in T₁ (23.5% vs 2.9%; p < 0.05). In conclusion, under the same conditions, the frequency of medium replacement significantly affected the in vitro development of caprine and ovine pre‐antral follicles. To improve the efficiency of the culture system, the medium must be replaced every 2 and 6 days for goat and sheep pre‐antral follicles, respectively.  相似文献   

Antioxidant activity of uruguayan propolis. In vitro and cellular assays     

Silva V  Genta G  Möller MN  Masner M  Thomson L  Romero N  Radi R  Fernandes DC  Laurindo FR  Heinzen H  Fierro W  Denicola A 《Journal of agricultural and food chemistry》2011,59(12):6430-6437

The antioxidant capacity of propolis from the southern region of Uruguay was evaluated using in vitro as well as cellular assays. Free radical scavenging capacity was assessed by ORAC, obtaining values significantly higher than those of other natural products (8000 μmol Trolox equiv/g propolis). ORAC values correlated well with total polyphenol content (determined by Folin-Ciocalteu method) and UV absorption. Total polyphenol content (150 mg gallic acid equiv/g propolis) and flavonoids (45 mg quercetin equiv/g propolis) were similar to values reported for southern Brazilian (group 3) and Argentinean propolis. Flavonoid composition determined by RP-HPLC indicates a strong poplar-tree origin. Samples high in polyphenols efficiently inhibit low-density lipoprotein lipoperoxidation and tyrosine nitration. In addition, Uruguayan propolis was found to induce the expression of endothelial nitric oxide synthase and inhibit endothelial NADPH oxidase, suggesting a potential cardiovascular benefit by increasing nitric oxide bioavailability in the endothelium.  相似文献   

Virulence genes and plasmid profiles in Rhodococcus equi isolates from domestic pigs and wild boars (Sus scrofa) in Brazil     

Ribeiro MG  Takai S  Guazzelli A  Lara GH  da Silva AV  Fernandes MC  Condas LA  Siqueira AK  Salerno T 《Research in veterinary science》2011,91(3):478-481

The virulence genes and plasmid profiles of 23 Rhodococcus equi isolates from 258 lymph nodes from domestic pigs (129 nodes with lesions and 129 without lesions) and 120 lymph nodes from slaughtered wild boars (60 nodes with lesions and 60 without) were characterized. R. equi was obtained from 19 lymph nodes of domestic pigs, 17 with, and two without lesions, and from four lymph nodes with lesions, from wild boars. The 23 isolates were tested for the presence of vapA and vapB genes, responsible for the 15–17 and 20 kDa virulence-associated proteins, respectively, by PCR in order to characterize as virulent (VapA), intermediately virulent (VapB) and avirulent. Plasmid DNAs were isolated and analyzed by digestion with restriction endonucleases to estimate size and compare their polymorphisms. Of the 19 domestic pigs strains, seven (36.8%) were avirulent and 12 (63.2%) were intermediately virulent, with the intermediately virulent isolates being plasmid types 8 (8 isolates), 10 (2 isolates), 1 (1 isolate) and 29 (1 isolate). The plasmid type of four strains isolated from wild boars was also intermediately virulent type 8. None of the domestic pigs and wild boar isolates showed the vapA gene. These findings demonstrate a high occurrence of plasmid type 8 in isolates from pigs and wild boars, and the similarity of plasmid types in the domestic pigs, wild boars and human isolates in Brazil.  相似文献   

An intensive search for promising fungal biological control agents of ticks, particularly Rhipicephalus microplus     

Fernandes EK  Angelo IC  Rangel DE  Bahiense TC  Moraes AM  Roberts DW  Bittencourt VR 《Veterinary parasitology》2011,182(2-4):307-318

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Synthesis of a combinatorial library of amides and its evaluation against the fall armyworm, Spodoptera frugiperda     

Castral TC  Matos AP  Monteiro JL  Araujo FM  Bondancia TM  Batista-Pereira LG  Fernandes JB  Vieira PC  da Silva MF  Corrêa AG 《Journal of agricultural and food chemistry》2011,59(9):4822-4827

The fall armyworm Spodoptera frugiperda is a polyphagous pest that causes important damage in different regions of America and mainly affects corn crops in both tropical and subtropical areas. Currently, control relies on both transgenic plants and/or chemical pesticides. In this work we describe the preparation of an indexed combinatorial library of amides and its toxic effect by contact against S. frugiperda . (E)-1-(1-Piperidinyl)-3-[4-(trifluoromethoxy)phenyl]-2-propen-1-one was the most active compound with an LD(50) = 0.793 μg mg(-1) of larva. This amide was also evaluated by ingestion and at the lowest concentration (1 mg kg(-1)) achieved 83.3% mortality.  相似文献   

Geomorphology and soils distribution under paraglacial conditions in an ice-free area of Admiralty Bay, King George Island, Antarctica     

Marcio Rocha Francelino  Carlos Ernesto G.R. Schaefer  Felipe Nogueira Bello Simas  Elpídio Incio Fernandes Filho  Jos Joo Lelis Leal de Souza  Liovando Marciano da Costa 《CATENA》2011,85(3):194-204

The main pedological, geomorphological and cryogenic features of Keller Peninsula, part of Admiralty Bay, King George Island, Maritime Antarctica, were mapped and quantified with emphasis on the relationship between the ice retreat process, melt-out, landform development and soil distribution. Moraines, protalus, scree slopes, inactive glacial cirques, uplift marine terraces, biogenic landforms, arêtes and Felsenmeer were mapped. Scree slope is the main landform, covering approximately 25% of the peninsula, indicating prominent paraglacial features. Inherited, glacial landforms, such as lateral moraines, highland plateau and exhumed U shaped-valleys, are now being exposed in north Keller by ice shrinkage of former ice protecting cover. Landforms influenced soil formation and stability. Cryosols and Leptosols (WRB) roughly corresponding to Gelisols and Entisols (SSS), respectively, are the most common soil classes, with an overall tendency of absent permafrost in the coastal areas, changing to sporadic permafrost at mid-slope, and discontinuous permafrost with greater altitude and substrate stability.  相似文献