Single step genomic evaluation for female fertility in Nordic Red dairy cattle          下载免费PDF全文

Kaarina Matilainen  Ismo Strandén  Gert Pedersen Aamand  Esa A. Mäntysaari 《Zeitschrift für Tierzüchtung und Züchtungsbiologie》2018,135(5):337-348

Joint Nordic (Denmark, Finland, Sweden) genetic evaluation of female fertility is currently based on the multiple trait multilactation animal model (BLUP). Here, single step genomic model (ssGBLUP) was applied for the Nordic Red dairy cattle fertility evaluation. The 11 traits comprised of nonreturn rate and days from first to last insemination in heifers and first three parities, and days from calving to first insemination in the first three parities. Traits had low heritabilities (0.015–0.04), but moderately high genetic correlations between the parities (0.60–0.88). Phenotypic data included 4,226,715 animals with records and pedigree 5,445,392 animals. Unknown parents were assigned into 332 phantom parent groups (PPG). In mixed model equations animals were associated with PPG effects through the pedigree or both the pedigree and genomic information. Genotype information of 46,914 SNPs was available for 33,969 animals in the pedigree. When PPG used pedigree information only, BLUP converged after 2,420 iterations whereas the ssGBLUP evaluation needed over ten thousand iterations. When the PPG effects were solved accounting both the pedigree and the genomic information, the ssGBLUP model converged after 2,406 iterations. Also, with the latter model breeding values by ssGBLUP and BLUP became more consistent and genetic trends followed each other well. Models were validated using forward prediction of the young bulls. Reliabilities and variance inflation of predicted genomic breeding values (values for parent averages in brackets) for the 11 traits ranged 0.22–0.31 (0.10–0.27) and 0.81–0.95 (0.83–1.06), respectively. The ssGBLUP model gave always higher validation reliabilities than BLUP, but largest increases were for the cow fertility traits.  相似文献   

Detection of Cyprinid Herpesvirus 1 DNA in cutaneous squamous cell carcinoma of koi carp (Cyprinus carpio)          下载免费PDF全文

Rubina Sirri  Sara Ciulli  Tim Barbé  Enrico Volpe  Maurizio Lazzari  Valeria Franceschini  Francesca Errani  Giuseppe Sarli  Luciana Mandrioli 《Veterinary dermatology》2018,29(1):60-e24

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Heritability of the resistance to pepper huasteco yellow vein virus in wild genotypes of <Emphasis Type="Italic">Capsicum annuum</Emphasis>     

Jesús Enrique Retes-Manjarrez  Sergio Hernández-Verdugo  Alexandre Evrard  José Antonio Garzón-Tiznado 《Euphytica》2017,213(12):275

Pepper huasteco yellow vein virus (PHYVV) is the main virus of pepper crop in Mexico. No resistant cultivars are available and resistance breeding is hampered by the lack of knowledge of heritability (h ²) of PHYVV resistance. This is a continuation of previous studies and the objectives were to analyze the h ² and the behavior of the resistant trait to PHYVV. Four resistant assays were done with three resistant wild lines (UAS12, UAS13 and UAS10) of Capsicum annuum in the S4, S5, S6 and S7 generation under greenhouse conditions. Plants from all tests were inoculated with PHYVV through Bemisia tabaci. Line UAS12 was the most resistant showing a significantly proportion of resistant plants, less disease symptoms and longer incubation time, followed by the lines UAS13 and UAS10 in all assays. Distribution of symptoms showed a bimodal tendency in all the trials, suggesting that two groups of genes are involved in this resistance trait. The lines UAS12, UAS13 and UAS10 showed the same pattern of response to selection with an average of h ² of 0.17, 0.06, 0.02 and 0.00 in the S4, S5, S6 and S7, respectively. These results indicate that all lines responded positively to the selection in the S4, S5 and S6, whereas in the S7 there was no response by the possible exhaustion of variation. Line UAS12 is the most promising genotype and the lines UAS13 and UAS10 are genetic resources that can be supplemented to breed the resistance of PHYVV. These results provides basic information for resistance breeding.  相似文献   

Current knowledge and breeding perspectives for the miracle plant Synsepalum dulcificum (Schum. et Thonn.) Daniell     

Enoch G. Achigan-Dako  Dèdéou A. Tchokponhoué  Sognigbé N’Danikou  Jens Gebauer  Raymond S. Vodouhè 《Genetic Resources and Crop Evolution》2015,62(3):465-476

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Evaluation of Minerals,Phytochemical Compounds and Antioxidant Activity of Mexican,Central American,and African Green Leafy Vegetables     

Dulce M. Jiménez-Aguilar  Michael A. Grusak 《Plant foods for human nutrition (Dordrecht, Netherlands)》2015,70(4):357-364

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Sensitivity of Seeds to Chemical Mutagens,Detection of DNA Polymorphisms and Agro-Metrical Traits in M1 Generation of Coffee (Coffea arabica L.)     

Vargas-Segura  César  López-Gamboa  Emmanuel  Araya-Valverde  Emanuel  Valdez-Melara  Marta  Gatica-Arias  Andrés 《Journal of Crop Science and Biotechnology》2019,22(5):451-464

Journal of Crop Science and Biotechnology - Coffee (Coffea Arabica L.) is threatened by biotic and abiotic stresses. Nevertheless, the breeding of Arabica coffee is restricted due to its low...  相似文献   

Black carbon estimation in French calcareous soils using chemo‐thermal oxidation method     

G. Caria  D. Arrouays  E. Dubromel  C. Jolivet  C. Ratié  M. Bernoux  B. G. Barthès  D. Brunet  C. Grinand 《Soil Use and Management》2011,27(3):333-339

We studied the black carbon (BC) content of ca. 405 samples from French topsoil and artificial soil and carbonate mixtures. Our protocol involved three main steps: (i) decarbonation by HCl, (ii) elimination of non‐pyrogenic organic carbon in a furnace at 375 °C, and (iii) quantification of residual carbon by CHN analysis. BC content increased for calcareous soils according to their carbonates content. Subsequent analyses confirmed the existence of a methodological artefact for BC determination only in calcareous soils. Decarbonation changes the thermal properties of organic matter, creating more recalcitrant carbon than in the initial sample. Higher CaCO₃ and organic carbon content results in a more pronounced artefact. The reversal of the first two steps of the chemo‐thermal oxidation method (i.e. thermal oxidation before soil decarbonation) eliminates this artefact. Overall, our results suggest that BC content may have been overestimated in a large number of studies on calcareous soils.  相似文献   

Treatment effects of intra-articular triamcinolone acetonide in an equine model of recurrent joint inflammation     

Clodagh M. Kearney  Nicoline M. Korthagen  Saskia G. M. Plomp  Margot C. Labberté  Janny C. de Grauw  P. R. van Weeren  Pieter A. J. Brama 《Equine veterinary journal》2021,53(6):1277-1286

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Molecular cytogenetic identification and phenotypic description of a new synthetic amphiploid,Triticum timococcum (AtAtGGAmAm)     

Péter Mikó  Mária Megyeri  András Farkas  István Molnár  Márta Molnár-Láng 《Genetic Resources and Crop Evolution》2015,62(1):55-66

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Erratum to: Mechanical transmission of <Emphasis Type="Italic">Tomato leaf curl New Delhi virus</Emphasis> to cucurbit germplasm: selection of tolerance sources in <Emphasis Type="Italic">Cucumis melo</Emphasis>     

Carmelo López  María  Ferriol  Maria Belén Picó 《Euphytica》2017,213(1):18

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