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921.
Spatial heteroscedasticity may arise jointly with spatial autocorrelation in lattice data collected from agricultural trials
and environmental studies. This leads to spatial clustering not only in the level but also in the variation of the data, the
latter of which may be very important, for example, in constructing prediction intervals. This article introduces a spatial
stochastic volatility (SSV) component into the widely used conditional autoregressive (CAR) model to capture the spatial clustering
in heteroscedasticity. The SSV component is a mean zero, conditionally independent Gaussian process given a latent spatial
process of the variances. The logarithm of the latent variance process is specified by an intrinsic Gaussian Markov random
field. The SSV model relaxes the traditional homoscedasticity assumption for spatial heterogeneity and brings greater flexibility
to the popular spatial statistical models. The Bayesian method is used for inference. The full conditional distribution of
the heteroscedasticity components can be shown to be log-concave, which facilitates an adaptive rejection sampling algorithm.
Application to the well-known wheat yield data illustrates that incorporating spatial stochastic volatility may reveal the
spatial heteroscedasticity hidden from existing analyses. 相似文献
922.
Pedro Talhinhas José Leitão João Neves-Martins 《Genetic Resources and Crop Evolution》2006,53(3):563-578
Lupinus angustifolius L. is a Mediterranean species, domesticated in the 20th century, representing an important grain legume crop in Australia
and other countries. This work is focused on the collection of wild germplasm and on the characterisation of morphological
and molecular diversity of germplasm accessions. It reports the collection of 81 wild L. angustifolius accessions from the South and Centre of Portugal, available at the ‘Instituto Superior de Agronomia Gene Bank’, with subsequent
morphological and molecular characterisation of a selection of these and other accessions. A multivariate analysis of morphological
traits on 88 L. angustifolius accessions (including 59 wild Portuguese accessions, 15 cultivars and 14 breeding lines) showed a cline of variation on wild
germplasm, with plants from Southern Portugal characterised by earlier flowering, higher vegetative development and larger
seeds. AFLP and ISSR molecular markers grouped modern cultivars as sub-clusters within the wider diversity of wild germplasm,
revealing the narrow pool of genetic diversity on which domesticated accessions are based. The importance of preserving, characterising
and using wild genetic resources for L. angustifolius crop improvement is outlined by the results obtained. 相似文献
923.
Gemechu Keneni Mussa Jarso Tezera Wolabu Getnet Dino 《Genetic Resources and Crop Evolution》2005,52(5):539-549
An experiment was conducted in 2001 at Holetta and Kulumsa, Ethiopia, to study the extent and pattern of genetic diversity
in Ethiopian field pea (Pisum sativum L.) landraces. One hundred forty-eight germplasm accessions were grown in an alpha lattice design with 2 replications. Data
on 12 traits were collected and analyzed. Differences among the accessions were significant for most of the traits (except
number of seeds/ pod) at each location even though differences pooled over location were mostly non-significant. The accessions
were grouped into five clusters of different sizes. Accessions from the southern part of the country (Arsi) distributed overall
clusters while those from the northern half (North and South Wello, North Gonder and North Shewa) fell into clusters C1 to C3. Cumulative effects of a number of characters dictated differentiation of the accessions into clusters. There was no definite
relationship between geographic diversity and genetic diversity as overlapping was encountered in clustering pattern among
accessions from different parts of the country. Accessions from different regions might have similar genetic background and
those from the same origin might also have different genetic background. Therefore, geographic diversity should not necessarily
be used as an index of genetic diversity and parental selection should be based on a systematic study of genetic diversity
in a specific population. Genetic distances among most of the clusters were significant that crosses between parents selected
out of them are expected to generate desirable genetic recombination. Selection should also consider the special advantages
of each cluster and each accession within a cluster. Future germplasm collection, conservation and breeding efforts should
focus not only on inter-regional diversity but also on intra-regional diversity. 相似文献
924.
Gemechu Keneni Mussa Jarso Tezera Wolabu Getnet Dino 《Genetic Resources and Crop Evolution》2005,52(5):551-561
A field experiment was conducted in 2001 at Holetta and Kulumsa, Ethiopia, to study genetic diversity in Ethiopian faba bean
(Vicia faba L.) landraces. One hundred sixty random germplasm accessions were grown in an alpha lattice design with two replications. Data
on 12 traits were collected and analyzed. Significant differences were observed among the accessions for most of the traits
(except number of pods/podding nodes) at each location even though differences pooled over location were mostly non-significant.
Cluster analysis distinguished seven diversity classes of different sizes. Accessions from the northern half of the country
(North and South Wello, North Gonder and North Shewa) were closely related while those from the southern part of the country
(Arsi) were highly diverse. Cumulative effects of a number of characters dictated differentiation of the accessions into clusters.
Some overlapping were encountered between accessions from the northern and those from the southern parts of the country. The
study revealed that accessions from different regions might have similar genetic background and those from the same origin
might also have different genetic background. Therefore, geographic diversity should not necessarily be used as an index of
genetic diversity and parental selection should be based on a systematic study of genetic diversity in a specific population.
Genetic distances between most of the clusters were significant that crosses between parents selected out of them are expected
to generate desirable progenies. Future germplasm collection, conservation and utilization strategies should put more focus
not only on inter-regional diversity in the country as a whole but also on intra-regional diversity in Arsi. 相似文献
925.
Hongjie Li Robert L. Conner Qin Chen Robert J. Graf André Laroche F. Ahmad A. D. Kuzyk 《Genetic Resources and Crop Evolution》2005,51(8):827-835
Wheat streak mosaic virus (WSMV), vectored by the wheat curl mite (WCM),Aceria tosichella Keifer, is one of the most destructive viral diseases of wheat found in many wheat producing areas of the world. Host resistance is the most effective method for controlling this disease and its vector. Symptomatological analysis and enzyme-linked immunosorbent assay (ELISA) were used to characterize WSMV-resistance in wheat-alien partial amphiploid lines and their derivatives. The results showed that most of partial amphiploids derived fromThinopyrum ponticum andTh. intermedium were free of systemic symptoms with very low ELISA readings that were similar to that of the non-inoculated Chinese Spring control. While the partial amphiploid lines 693 and PWM706 were identified as new genetic resources of resistance to WSMV. The present study demonstrated that both symptomatological and ELISA methods efficiently assessed WSMV-resistance in the wheat-alien hybrids and systemic symptom incidence and ELISA absorbance readings were highly correlated (r
2 = 0.8658–0.9323) over time following inoculation. The ELISA results also indicated that the virus did not buildup in the plant tissues of these virus-resistant partial amphiploids. Similar results were observed in chromosome translocation and substitution lines that have the geneWsm1 conferring WSMV resistance. However, the lines containing the geneWsm1 and all the partial amphiploid lines, except Agrotana, were susceptible to the WCM. One line derived from a cross of wheat and Agrotana, was effective in controlling the spread of WSMV and was highly resistant to the WCM. Another line and an accession ofTriticum dicoccoides (Koern.) Schweinf. were highly susceptible to WSMV and WCM. Early disease development was delayed in a new hard red winter cultivar McClintock. The partial WSMV-resistance of McClintock was demonstrated by initially low ELISA readings, and a lower percentage of infected plants than other WSMV-susceptible wheat. The use of the identified promising sources of resistance to WSMV and the WCM in wheat breeding is discussed.LRC Contribution No. 387-01061. 相似文献
926.
Stephanie L. Meadows-Shropshire Chris Gennings W. Hans Carter 《Journal of Agricultural, Biological & Environmental Statistics》2005,10(1):104-117
In the analysis of mixtures of drugs/chemicals it is often of interest to test for the presence of interaction. If the hypothesis
of no interaction (additivity) is not rejected, then the analyst may reasonably claim additivity if and only if the study
is powered to a desired (e.g., biologically meaningful) level. The objective of this article is to address the sample size
and power issues related to testing the hypothesis of additivity at specified mixture points. The study of disinfectant by-products
(DBPs) found in drinking water, described in earlier literature, is used to illustrate the procedures for estimating power
and sample sizes for detecting interactions at specified mixtures. The four trihalomethanes used in the study are bromodichloromethane
(BDCM), chlorodibromomethane (CDBM), chloroform (CHCl3), and bromoform (CHBr3) 相似文献
927.
Purpose
Soil macropores play a principal role in water infiltration but they are highly variable. The objectives of this study were (1) to investigate the temporal change in macropores of an Ultisol as affected by land use and slope position and (2) to analyze contribution of macropores to water infiltration.Materials and methods
Water infiltration was measured at upper and lower slopes in citrus orchard and watermelon field once every 2 months for 1 year using tension infiltrometers at a successive pressure head from ?12, ?6, ?3, to 0 hPa.Results and discussion
Hydraulic conductivity (K) was significantly affected by land use and slope position except at 0 hPa pressure head, showing a significant temporal variation. Effective macroporosity, derived from the increment of hydraulic conductivity between ?3 and 0 hPa, showed a significant temporal variation. Such temporal variation was land use (P?<?0.05) and slope position (P?<?0.001) dependent. Despite of low proportion in total soil volume (averaged 3.5 cm3 m?3), the macropores contributed 47 % of water flux on average. The macroporosity was more stable and higher in the citrus orchard (2.43 cm3 m?3, coefficient of variance (CV)?=?75 %) than in the watermelon field (1.72 cm3 m?3, CV?=?117 %) and contributed more to infiltration in the citrus orchard (60 %, CV?=?16 %) than in the watermelon field (33 %, CV?=?43 %) as well, because tillage was operated only in the watermelon field.Conclusions
No-tillage increased water conducting macropores but did not increase hydraulic conductivity irrespective of slope position.928.
Hongbiao Cui Yuchao Fan Lei Xu Jing Zhou Dongmei Zhou Jingdong Mao Guodong Fang Long Cang Zhenqiu Zhu 《Journal of Soils and Sediments》2016,16(5):1498-1508
Purpose
In situ immobilization of heavy metal-contaminated soils with the repeated incorporation of amendments can effectively reduce the bioavailability of soil heavy metals. However, the long-term application of amendments would lead to the destruction of soil structure and accumulation of soil toxic elements, ultimately affecting food security and quality. Thus, the sustainability of the amendments in a heavy metal-contaminated soil was evaluated from 2010 to 2012.Materials and methods
Batch field experiments were conducted in the soils, which were amended with apatite (22.3 t ha?1), lime (4.45 t ha?1), and charcoal (66.8 t ha?1), respectively. The amendments were applied only one time in 2009, and ryegrass was sown each year. Ryegrass and setaria glauca (a kind of weed) were harvested each year. Concentrations of copper (Cu) and cadmium (Cd) were determined by batch experiments. Five fractions of Cu and Cd were evaluated by a sequential extraction procedure.Results and discussion
Ryegrass grew well in the amended soils in the first year, but it failed to grow in all the soils in the third year. However, setaria glauca could grow with higher biomass in all the amended soils. The treatment of apatite combined with plants was more effective than lime and charcoal treatments in removing Cu and Cd from the contaminated soils by taking biomass into account. Apatite had the best sustainable effect on alleviating soil acidification. The Cu and Cd concentrations of CaCl2-extractable and exchangeable fractions decreased with the application of amendments. Moreover, apatite and lime could effectively maintain the bioavailability of Cu and Cd low.Conclusions
Apatite had a better sustainable effect on the remediation of heavy metal-contaminated soils than lime and charcoal. Although all the amendment treated soils did not reduce soil total concentrations of Cu and Cd, they could effectively reduce the environmental risk of the contaminated soils. The findings could be effectively used for in situ remediation of heavy metal-contaminated soils.929.
Mairead Shore Phil Jordan Per-Erik Mellander Mary Kelly-Quinn Karen Daly James Tom Sims David P. Wall Alice Rowena Melland 《Journal of Soils and Sediments》2016,16(5):1643-1654
Purpose
This study investigated the phosphorus (P) source, mobilisation and transport potential of ditch bed sediments as well as surrounding field and bank soils in two agricultural headwater catchments with contrasting soil drainage capacities. This information is important for discerning the potential for ditches to attenuate or augment transfers of P from upstream sources and thus for developing appropriate management strategies for these features.Materials and methods
Phosphorus sources were characterised using the Mehlich3-P, water-soluble P and total P tests. Phosphorus mobilisation potential was characterised using the Mehlich3-AL/P, Mehlich3-Ca/P and DESPRAL P tests. Phosphorus transport potential was characterised using data collected on the presence/absence of surface water in ditches during field surveys and downstream turbidity data.Results and discussion
Ditch sediments had similar P source contents (Mehlich3-P, water-soluble P and total P) to the surrounding field soils and higher P contents than bank soils. However, calcium contents of sediments in the poorly drained catchment reflected the deep sub-soils rather than the surrounding field and bank soils. Mehlich3-Al/P and Mehlich3-Ca/P contents of ditch sediments in the well (non-calcareous) and poorly (calcareous) drained catchments respectively indicated potential for P retention (above thresholds of 11.7 and 74, respectively). However, sediments were less aggregated than field soils and may mobilise more particulate P (PP) during rain events. Nevertheless, the majority of surveyed ditches dried out from March to September 2011; thus, their potential to mobilise PP may be less important than their capacity to attenuate soluble and PP during this time.Conclusions
In these and similar catchments, soluble P attenuation and particulate P mobilisation should be maximised and minimised, respectively, for example, by cleaning out the sediments before they become saturated with P and encouraging vegetation growth on ditch beds. This study also highlighted the influence of deep sub-soils on soluble P retention in ditches and thus the utility of characterising soils below depths normally included in soil classifications.930.
Mathieu Le Meur Emmanuelle Montargès-Pelletier Allan Bauer Renaud Gley Sylvie Migot Odile Barres Claire Delus Frédéric Villiéras 《Journal of Soils and Sediments》2016,16(5):1625-1642