Multivariate effects of plant canopy, soil physico-chemistry and microbiology on Sclerotinia stem rot of soybean in relation to crop rotation and urban compost amendment     

Guillaume X. Rousseau  Sylvie Rioux 《Soil biology & biochemistry》2006,38(12):3325-3342

The effects of canopy, soil physico-chemical and microbiological variables on Sclerotinia stem rot (SSR) on soybean were assessed in two soils (clay loam and sandy loam) using multiple regression and canonical redundancy analysis (RDA) and their partial form to control for the rotation (2 or 3-y-corn/soybean monoculture) and fertilization (mineral/urban compost) or spatial variables effects. The models revealed the minimal sets of variables that best explain the variance of the survival of Sclerotinia sclerotiorum’s sclerotia, carpogenic germination, disease severity and their associations. In clay loam, the 3-y-corn rotation reduced disease severity mainly through the reduction of weed biomass that favoured carpogenic germination. Urban compost has a conducive effect explained by a better soil surface drainage. Additionally, total N was found suppressive to sclerotial survival. In sandy loam, the carpogenic germination was negatively correlated with high C mineralization quotient and aggregate stability but correlated positively with Ca. Sclerotial survival was negatively correlated with pH and Ca, and positively correlated with biological fertility index. Aggregate stability, Ca and pH were associated with the urban compost. The regression and RDA analyses allowed to identify key variables that drived SSR development and explain their relationship with the cultural practices, soil health, as well as the spatial variation of disease variables.  相似文献   

Serological, Molecular, and Pathotype Diversity of Pepper veinal mottle virus and Chili veinal mottle virus   总被引：1，自引：0，他引：1  

Moury B  Palloix A  Caranta C  Gognalons P  Souche S  Selassie KG  Marchoux G 《Phytopathology》2005,95(3):227-232

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Investigating Disease Spread between Two Assessment Dates with Permutation Tests on a Lattice     

Thébaud G  Peyrard N  Dallot S  Calonnec A  Labonne G 《Phytopathology》2005,95(12):1453-1461

ABSTRACT Mapping and analyzing the disease status of individual plants within a study area at successive dates can give insight into the processes involved in the spread of a disease. We propose a permutation method to analyze such spatiotemporal maps of binary data (healthy or diseased plants) in regularly spaced plantings. It requires little prior information on the causes of disease spread and handles missing plants and censored data. A Monte Carlo test is used to assess whether the location of newly diseased plants is independent of the location of previously diseased plants. The test takes account of the significant spatial structures at each date in order to separate nonrandomness caused by the structure at one date from nonrandomness caused by the dependence between newly diseased plants and previously diseased plants. If there is a nonrandom structure at both dates, independent patterns are simulated by randomly shifting the entire pattern observed at the second date. Otherwise, independent patterns are simulated by randomly reallocating the positions of one group of diseased plants. Simulated and observed patterns of disease are then compared through distance-based statistics. The performance of the method and its robustness are evaluated by its ability to accurately identify simulated independent and dependent bivariate point patterns. Additionally, two realworld spatiotemporal maps with contrasting disease progress illustrate how the tests can provide valuable clues about the processes of disease spread. This method can supplement biological investigations and be used as an exploratory step before developing a specific mechanistic model.  相似文献   

Immunisation with a combination of two complementary feline calicivirus strains induces a broad cross-protection against heterologous challenges     

Poulet H  Brunet S  Leroy V  Chappuis G 《Veterinary microbiology》2005,106(1-2):17-31

Feline calicivirus (FCV) is characterised by a high degree of antigenic variation potentially compromising vaccine efficacy. Inclusion of several FCV strains or antigens in current vaccines could be a means to improve protection against antigenically distinct isolates. This study evaluated the synergy between two FCV strains (FCVG1 and FCV431) by comparing immunity induced by either strain with that provided by a combination of the two strains against an heterologous challenge with antigenically distant FCV strains (FCV393 and FCV220). Thirty-two SPF kittens were randomly allocated to four groups of eight cats in each group. Groups B, C and D cats were vaccinated once subcutaneously with strains FCVG1, FCV431, and FCVG1 + FCV431, respectively. Each kitten received a total dose of 10(3.4) CCID50 of FCV. Control group A was not immunised. On day 31, four cats from each group were challenged oronasally with FCV220 and four cats with FCV393. Following challenge, the cats were monitored for clinical signs, viral shedding and antibody responses. FCV220 and FCV393 induced severe clinical signs in control cats typical of FCV infection. Immunisation with both strains mixed together induced higher neutralizing antibody titres against FCV220 and FCV393 strains on average. Protection was observed in all groups, however combination of the two strains resulted in a better clinical protection and reduction of virus shedding after heterologous challenge. A moderate correlation was observed between neutralizing antibody titres at the time of challenge and protection against clinical signs. These results indicated that vaccines combining antigens from different FCV strains may induce a broader heterologous protection.  相似文献   

Factors Affecting the Spread of Plum pox virus Strain M in Peach Orchards Subjected to Roguing in France     

Dallot S  Gottwald T  Labonne G  Quiot JB 《Phytopathology》2004,94(12):1390-1398

ABSTRACT We evaluated the impact of roguing on the spread and persistence of the aggressive Plum pox virus strain M (PPV-M) in 19 peach orchard blocks in Southern France. During a 7- to 10-year period, orchards were visually inspected for PPV symptoms, and symptomatic trees were removed every year. Disease incidence was low in all orchards at disease discovery and was <1% in 16 of the 19 orchard blocks. The spread of Sharka disease was limited in all 19 blocks, with an annual disease incidence between 2 and 6%. However, new symptomatic trees were continuously detected, even after 7 to 10 years of uninterrupted control measures. An extended Cox model was developed to evaluate to what extent tree location, orchard characteristics, environment, and disease status within the vicinity influenced the risk of infection through time. Eleven variables with potential effect on tree survival (i.e., maintenance of a tree in a disease- free status through time) were selected from survey data and databases created using a geographical information system. Area of the orchard, density of planting, distance of a tree from the edge of the orchard block sharing a boundary with another diseased orchard, and distance to the nearest previously detected symptomatic tree had a significant effect on the risk for a tree to become infected through time. The combined results of this study suggest that new PPV-M infections within orchards subjected to roguing resulted from exogenous sources of inoculum, disease development of latent infected trees, as well as infected trees overlooked within the orchards during visual surveys. A revision of the survey and the roguing procedures used for more effective removal of potential sources of inoculum within the orchards and in the vicinity of the orchards would improve disease control suppression of PPV.  相似文献   

Interactions between bovine beta-lactoglobulin A and various bioactive peptides as studied by front-face fluorescence spectroscopy     

Roufik S  Gauthier SF  Dufour E  Turgeon SL 《Journal of agricultural and food chemistry》2006,54(14):4962-4969

Front-face fluorescence spectroscopy was used for the first time to study the interactions between bovine beta-lactoglobulin variant A (beta-Lg A) and various beta-Lg-derived bioactive peptides. Fluorescence spectra were recorded for beta-Lg A-peptide mixtures at 25 degrees C and pH 6.8 with an excitation wavelength of 290 nm to characterize the molecular environment of tryptophan (Trp) residues present in the protein but absent in the peptides. Spectra remained unchanged following addition of peptides beta-Lg f92-100 and beta-Lg f125-135, while Phe-Phe interaction between beta-Lg f69-83 molecules interfered with analysis. Addition of beta-Lg f102-105 produced a blue shift (3 nm) and a significant increase in fluorescence intensity, while addition of beta-Lg f142-148 also caused a significant increase in fluorescence intensity but accompanied by a red shift (3 nm). These results indicate that the polarity of the Trp environment in the beta-Lg A structure may be modified differently depending on the peptide added.  相似文献   

Serum thyroid hormone concentrations and thyroglobulin autoantibodies in trained and non-trained healthy whippets     

van Geffen C  Bavegems V  Duchateau L  De Roover K  Daminet S 《Veterinary journal (London, England : 1997)》2006,172(1):135-140

Numerous factors including non-thyroidal systemic diseases and drug administration can significantly alter canine thyroid function test results. Furthermore, the importance of breed specific variations has probably been underestimated. In this study, total thyroxine (TT4), free thyroxine (FT4), canine endogenous thyroid stimulating hormone (cTSH) serum concentrations and thyroglobulin autoantibodies (TgAA) were determined in a population of healthy whippets and compared to a control group of different breeds. Mean TT4 values were significantly lower in the whippets but no significant differences were seen between whippets and control dogs for FT4 and for cTSH. The prevalence of serum TgAA in the whippets was 2%, and this was not significantly different from the controls. The results suggest a breed variation for TT4, but not for FT4, cTSH and TgAA serum concentrations in whippets. Serum thyroid hormone concentrations were also compared between trained and non-trained whippets and it was concluded that regular training did not seem to have any significant influence.  相似文献   

The Xist RNA gene evolved in eutherians by pseudogenization of a protein-coding gene   总被引：1，自引：0，他引：1  

Duret L  Chureau C  Samain S  Weissenbach J  Avner P 《Science (New York, N.Y.)》2006,312(5780):1653-1655

The Xist noncoding RNA is the key initiator of the process of X chromosome inactivation in eutherian mammals, but its precise function and origin remain unknown. Although Xist is well conserved among eutherians, until now, no homolog has been identified in other mammals. We show here that Xist evolved, at least partly, from a protein-coding gene and that the loss of protein-coding function of the proto-Xist coincides with the four flanking protein genes becoming pseudogenes. This event occurred after the divergence between eutherians and marsupials, which suggests that mechanisms of dosage compensation have evolved independently in both lineages.  相似文献   

Detection of bacterial wilt infection caused by Ralstonia solanacearum in potato (Solanum tuberosum L.) through multifractal analysis applied to remotely sensed data     

Perla Chávez  Christian Yarlequé  Hildo Loayza  Víctor Mares  Paola Hancco  Sylvie Priou  María del Pilar Márquez  Adolfo Posadas  Percy Zorogastúa  Jaume Flexas  Roberto Quiroz 《Precision Agriculture》2012,13(2):236-255

Potato bacterial wilt, caused by the bacterium Ralstonia solanacearum race 3 biovar 2 (R3bv2), affects potato production in several regions in the world. The disease becomes visually detectable when extensive damage to the crop has already occurred. Two greenhouse experiments were conducted to test the capability of a remote sensing diagnostic method supported by multispectral and multifractal analyses of the light reflectance signal, to detect physiological and morphological changes in plants caused by the infection. The analysis was carried out using the Wavelet Transform Modulus Maxima (WTMM) combined with the Multifractal (MF) analysis to assess the variability of high-resolution temporal and spatial signals and the conservative properties of the processes across temporal and spatial scales. The multispectral signal, enhanced by multifractal analysis, detected both symptomatic and latently infected plants, matching the results of ELISA laboratory assessment in 100 and 82%, respectively. Although the multispectral method provided no earlier detection than the visual assessment on symptomatic plants, the former was able to detect asymptomatic latent infection, showing a great potential as a monitoring tool for the control of bacterial wilt in potato crops. Applied to precision agriculture, this capability of the remote sensing diagnostic methodology would provide a more efficient control of the disease through an early and full spatial assessment of the health status of the crop and the prevention of spreading the disease.  相似文献   

Identification and functional expression of the mitochondrial pyruvate carrier   总被引：1，自引：0，他引：1  

Herzig S  Raemy E  Montessuit S  Veuthey JL  Zamboni N  Westermann B  Kunji ER  Martinou JC 《Science (New York, N.Y.)》2012,337(6090):93-96

The transport of pyruvate, the end product of glycolysis, into mitochondria is an essential process that provides the organelle with a major oxidative fuel. Although the existence of a specific mitochondrial pyruvate carrier (MPC) has been anticipated, its molecular identity remained unknown. We report that MPC is a heterocomplex formed by two members of a family of previously uncharacterized membrane proteins that are conserved from yeast to mammals. Members of the MPC family were found in the inner mitochondrial membrane, and yeast mutants lacking MPC proteins showed severe defects in mitochondrial pyruvate uptake. Coexpression of mouse MPC1 and MPC2 in Lactococcus lactis promoted transport of pyruvate across the membrane. These observations firmly establish these proteins as essential components of the MPC.  相似文献