Influence of single-nucleotide polymorphisms in the gene encoding granule-bound starch synthase I on amylose content in Vietnamese rice cultivars     

Tran Thi Thu Hoai  Hiroaki Matsusaka  Yoshiko Toyosawa  Tran Danh Suu  Hikaru Satoh  Toshihiro Kumamaru 《Breeding Science》2014,64(2):142-148

Amylose content is one of the most important factors influencing the physical and chemical properties of starch in rice. Analysis of 352 Vietnamese rice cultivars revealed a wide range of variation in apparent amylose content and the expression level of granule-bound starch synthase. On the basis of single-nucleotide polymorphisms (SNP) at the splicing donor site of the first intron and in the coding region of the granule-bound starch synthase I gene, Waxy gene, alleles can be classified into seven groups that reflect differences in apparent amylose content. The very low and low apparent amylose content levels were tightly associated with a G to T in the first intron whereas intermediate and high amylose was associated with a T genotype at SNP in exon 10. The correlation between the combination of T genotype at SNP in the first intron, C in exon 6, or C in exon 10 was predominant among low amylose rice varieties. Our analysis confirmed the existence of Wx^op allele in Vietnamese rice germplasm. The results of this study suggest that the low amylose properties of Vietnamese local rice germplasm are attributable to spontaneous mutations at exons, and not at the splicing donor site.  相似文献   

Effects of 2, 4-Dichlorophenoxy Acetic Acid and Light on Growth of Gerbera (Gerbera jamesonii cv.Daxueju) Callus     

Esther Mabafokeng MOHLAKOLA  Chunzhen CHENG  Yuling LIN  Rongfang GUO  Kyaw Thu MIN  Yukun CHEN  Zhongxiong LAI 《农业科学与技术》2017,18(3)

This study was conducted to determine effects of 2,4-dichlorophenoxy acetic acid (2,4-D) and light on growth of gerbera (Gerbera jamesonii cv.Daxueju) callus.Callus was induced from both petiole and leaf explants of gerbera on Murashige and Skoog medium supplemented with 3％ sucrose and various concentrations of 2,4-D and placed under light and dark.Callus induction percentage,callus size and callus fresh and dry weights were efficiently higher when using petiole as explant.MS medium supplemented with 1.5 mg/L 2,4-D showed the highest callus induction percentage of 96.70％.Callus induced under light had larger weight mass.It was indicated that 1.5 mg/L 2,4-D and light could promote growth of gerbera callus from petiole explant.  相似文献   

Effects of polyethylene glycol and a synthetic ice blocker during vitrification of immature porcine oocytes on survival and subsequent embryo development          下载免费PDF全文

Elisa Caroline da Silva Santos  Tamas Somfai  Ruth Appeltant  Thanh Quang Dang‐Nguyen  Junko Noguchi  Hiroyuki Kaneko  Kazuhiro Kikuchi 《Animal Science Journal》2017,88(8):1042-1048

We evaluated the effects of polyethylene glycol (PEG) and Supercool X‐1000 (SC) as supplements during the vitrification of immature cumulus‐enclosed porcine oocytes in a solution based on 17.5% ethylene glycol + 17.5% propylene glycol. After warming, the oocytes were subjected to in vitro maturation, fertilization and embryo culture. In Experiment 1, equilibration and vitrification solutions were supplemented with or without 2% (w/v) PEG (PEG+ and PEG‐, respectively). The survival rate, cleavage and blastocyst development were similar between PEG+ and PEG‐ groups; however, all values were lower than those in the non‐vitrified control. In Experiment 2, vitrification solution was supplemented with or without 1% (v/v) SC (SC+ and SC‐, respectively). The percentages of survival and blastocyst development were similar between SC+ and SC‐ groups but lower than those in the non‐vitrified control. The percentage of cleavage in the SC‐ group was significantly lower than the control and the SC+ groups, which were in turn similar to one another. In both experiments, the cell numbers in blastocysts were not significantly different among the non‐vitrified and vitrified groups. In conclusion, PEG did not improve oocyte survival and embryo development, whereas SC improved the ability of surviving oocytes to cleave but not to develop into blastocysts.  相似文献   

The potential of hyperspectral images and partial least square regression for predicting total carbon,total nitrogen and their isotope composition in forest litterfall samples     

Iman Tahmasbian  Zhihong Xu  Kadum Abdullah  Jun Zhou  Roya Esmaeilani  Thi Thu Nhan Nguyen  Shahla Hosseini Bai 《Journal of Soils and Sediments》2017,17(8):2091-2103

  相似文献   

Frequent use of colistin-based drug treatment to eliminate extended-spectrum beta-lactamase-producing <Emphasis Type="Italic">Escherichia coli</Emphasis> in backyard chicken farms in Thai Binh Province,Vietnam     

Tatsuya Nakayama  Michio Jinnai  Ryuji Kawahara  Khong Thi Diep  Nguyen Nam Thang  Tran Thi Hoa  Le Kieu Hanh  Pham Ngoc Khai  Yoshinori Sumimura  Yoshimasa Yamamoto 《Tropical animal health and production》2017,49(1):31-37

Reports of livestock infections with extended-spectrum beta-lactamase-producing Escherichia coli (ESBL-E) are increasing. Based on interviews conducted over a 6-month period, we found that veterinarians in the Vietnamese province of Thai Binh prefer to prescribe colistin-based drugs (CBD) in chicken farms. We aimed to clarify whether CBD use selects for strains of colistin-resistant ESBL-E. With the cooperation of seven local households, we detected ESBL-E in chickens’ feces after treating chickens with CBD. Phylogenetic groupings and the presence of CTX-M/AmpC genes were determined, and the multi-antibiotic susceptibility of isolates was analyzed. Our results showed that ESBL-E presented in seven chickens’ feces from two households. Seventy-two percent of ESBL-E isolates harbored CTX-M9 and the phylogenetic group A; the colistin minimum inhibitory concentration (MIC) of all isolated ESBL-E ranged from 0.064 to 1 μg mL^?1. Moreover, ESBL-E isolates were used to experimentally select for colistin resistance, and the effect of commercial CBD on ESBL-E was investigated. The results showed that an ESBL-E strain with a colistin MIC of 4 μg mL^?1 was able to grow in media with CBD. Although CBD treatment was effective, in vitro experiments demonstrated that ESBL-E can easily acquire colistin resistance. Therefore, restrictions on colistin use are necessary to prevent the emergence of colistin-resistant bacteria.  相似文献   

Evaluation of soybean for resistance to soybean rust in Vietnam     

T.A. Pham  C.B. Hill  M.R. Miles  B.T. Nguyen  T.T. Vu  T.D. Vuong  T.T. VanToai  H.T. Nguyen  G.L. Hartman 《Field Crops Research》2010

Soybean rust, caused by Phakopsora pachyrhizi Sydow, is a severe foliar disease of soybean [Glycine max (L.) Merr.] that occurs throughout most soybean producing regions of the world. The objective of this research was to evaluate selected soybean genotypes for resistance to soybean rust in Vietnam. Five field experiments in Vietnam were completed from 2006 to 2009. The area-under-the-disease-progress-curve (AUDPC) was calculated for each soybean genotype based on four disease assessments taken during the reproductive growth stages. AUDPC units among soybean genotypes in each experiment differed (P < 0.05). Over the five experiments, the resistant check DT 2000 was most often the genotype with the lowest AUDPC units while the sources of rust resistance (Rpp1-5) did not always have low AUDPC units in each experiment, although PI 230970 (Rpp2) appeared to be more stable. A few genotypes with non-characterized genes for resistance, such as PI 398998, PI 437323, and PI 549017, had the lowest AUDPC units in at least one of the experiments. These genetic resources may be useful for host plant resistance studies and breeding soybeans for rust resistance in Vietnam and other locations like Brazil and the United States that have more recently been inundated with soybean rust. A significant (P < 0.001) experiment × genotype interaction was found when the AUDPC data of 14 soybean genotypes tested in Experiments 1, 2, and 3 were combined and analyzed. This result indicates the potential importance of changing fungal races and/or biotypes that occur in the rust population.  相似文献   

Relationship of wood composition to growth traits of selected open-pollinated families of <Emphasis Type="Italic">Eucalyptus urophylla</Emphasis> from a progeny trial in Vietnam     

Tran Ho Quang  Nguyen Duc Kien  Sara von Arnold  Gunnar Jansson  Ha Huy Thinh  David Clapham 《New Forests》2010,39(3):301-312

Lignin and cellulose contents and wood basic density were related to diameter at breast height (DBH) in six fast-growing and five slow-growing families from a combined progeny test and seedling seed orchard of Eucalyptus urophylla grown for 10 years in northern Vietnam. The mean cellulose content of the fast-growing families was significantly higher than that of the slow growing-families (40.0 and 37.1%, respectively), and for individual trees cellulose content was significantly correlated phenotypically with DBH. Wood basic density was significantly lower in the fast-growing group than in the slow-growing group (0.506 and 0.535 g cm⁻³, respectively), and was significantly negatively correlated phenotypically with DBH. The lignin contents were not significantly different between groups. Cellulose content and wood basic density were not correlated. The main conclusion is that there is no obstacle to combining high growth rate with high cellulose content, for plantation of forests intended mainly for pulpwood.  相似文献   

Economic feasibility of recirculating aquaculture systems in pangasius farming     

Pham Thi Anh Ngoc  Miranda P. M. Meuwissen  Le Cong Tru  Roel H. Bosma  Johan Verreth  Alfons Oude Lansink 《Aquaculture Economics & Management (Blackwell Science)》2016,20(2):185-200

This study aims to analyze the economic feasibility of recirculating aquaculture systems (RAS) in pangasius farming in Vietnam. The study uses a capital budgeting approach and accounts for uncertainty in key parameters. Stochastic simulation is used to simulate the economic performance of medium and large farms operating with a traditional system or RAS. Data are obtained through structured surveys and a workshop in the Mekong River Delta. Results show that for large farms, net present value increases from an average of 589,000 USD/ha to 916,000 USD/ha after implementing RAS. Overall, the probability that RAS is a profitable investment is found to be 99% for both farm sizes. With RAS, the crucial parameters determining profitability are price, yield, costs of fingerling, feed, and initial investment. Findings on the robustness of the economic performance of RAS are useful to support public and private decision making towards increasing the sustainability of pangasius production.  相似文献   

A gamma-shaped detection function for line-transect surveys with mark-recapture and covariate data     

E. F. Becker  P. X. Quang 《Journal of Agricultural, Biological & Environmental Statistics》2009,14(2):207-223

We have developed a procedure for estimating animal population size from aerial survey data collected simultaneously by two observers on the same sighting platform. We used a line transect sample design where transects follow elevation contours in mountainous terrain. Because our 10 data sets from aerial line transect surveys, conducted over a terrestrial environment, consistently show unimodal detection shapes, we chose a gamma-shaped detection function that is unimodal and admits covariates. We fit models separately to data from each observer, and then used all of the data to estimate the probabilities at the apex of the detection curves. We used a Horvitz-Thompson estimator to estimate the population size. We illustrate our procedure on a recently collected brown bear data set.  相似文献   

Does the influence of earthworms on water infiltration, nitrogen leaching and soil respiration depend on the initial soil bulk density? A mesocosm experiment with the endogeic species Metaphire posthuma     

Pascal Jouquet  Ga?lle Huchet  Nicolas Bottinelli  Thuy Doan Thu  Toan Tran Duc 《Biology and Fertility of Soils》2012,48(5):561-567

Soil compaction has a negative impact on both earthworm abundance and diversity. Recent studies, however, suggest that earthworm cast properties are not influenced by the initial soil bulk density. With time, earthworms could therefore transform soils with different bulk densities into a soil with the same physical state and thus with a similar ecological functioning. This study aimed to test this hypothesis in two laboratory incubation experiments. First, we measured the influence of soil bulk density (1.1 or 1.4?g?cm^?3) on the production of cast by the endogeic earthworm species Metaphire posthuma. In a second experiment, we investigated the effect of M. posthuma on water infiltration, NH ₄ ⁺ , and NO ₃ ^? leaching and soil respiration at the same two soil bulk densities. Although initially higher, earthworm casting activity in soil at 1.4?g?cm^?3 decreased until it reached the same level of activity as earthworms in soil at 1.1?g?cm^?3. This behavioral plasticity led to a transformation of compacted and loose soils, with their own functioning, to a third and similar state with similar hydraulic conductivity, nitrogen leaching, and soil respiration. The consequences for soil organization and soil functioning are discussed.  相似文献