A role for interaction of the RNA polymerase flap domain with the sigma subunit in promoter recognition     

Kuznedelov K  Minakhin L  Niedziela-Majka A  Dove SL  Rogulja D  Nickels BE  Hochschild A  Heyduk T  Severinov K 《Science (New York, N.Y.)》2002,295(5556):855-857

In bacteria, promoter recognition depends on the RNA polymerase sigma subunit, which combines with the catalytically proficient RNA polymerase core to form the holoenzyme. The major class of bacterial promoters is defined by two conserved elements (the -10 and -35 elements, which are 10 and 35 nucleotides upstream of the initiation point, respectively) that are contacted by sigma in the holoenzyme. We show that recognition of promoters of this class depends on the "flexible flap" domain of the RNA polymerase beta subunit. The flap interacts with conserved region 4 of sigma and triggers a conformational change that moves region 4 into the correct position for interaction with the -35 element. Because the flexible flap is evolutionarily conserved, this domain may facilitate promoter recognition by specificity factors in eukaryotes as well.  相似文献   

The Effect of Chloride on Yield and Nutrient Interaction in Greenhouse Tomato (Lycopersicon Esculentum Mill.) Grown in Rockwool     

Andrzej Komosa  Tomasz Górniak 《Journal of plant nutrition》2015,38(3):355-370

The effect of increasing chloride content in nutrient solution on nutrient composition in root environment, interaction of nutrients in leaves and yield of greenhouse tomato cv. ‘Grace F₁’ grown in rockwool were searched. In Experiment I (2004–2005) the levels of 15, 30, 60, and 90 mg Cl·L^?1 but in Experiment II (2006) 30, 60, 90 and 120 mg Cl·L^?1 of nutrient solution were tested. The sources of chloride were water (9.6–10.7 mg Cl·L^?1) and calcium chloride (CaCl₂·2H₂O) but the rest of nutrients and sodium in all treatments were on the same levels. It was found that increasing content of chloride from 15 to 60 mg Cl·L^?1 enhanced the total and marketable fruit yield. Within the range of 60 to 90 mg Cl·L^?1 the yield was on the optimum level but the content of 120 mg Cl·L^?1 declined it. Increasing chloride content in the nutrient solutions was reflected in rising of chlorine content in leaves. The concentration of chloride above 60 mg C·L^?1 reduced the content of nitrogen but above 90 mg C·L^?1 declined the content of calcium, sulfur and zinc in leaves. The antagonism between Cl:N, Cl:Ca: Cl:S and Cl:Zn was appeared. More variable interaction were between Cl:K and Cl:B. At the low levels of chloride, from 15 to 60 mg Cl·L^?1, potassium and boron content were decreased but at the higher ones, from 90 to 120 mg·L^?1, these nutrients had increasing course. It was not found out the effect of chloride contents on macro and microelement contents in nutrient solution emitted from drippers however their content upraising in root medium (rockwool). The highest increase was found out for Na 95.1 and 64.9 % (Exp. I and II - respectively), next for Ca (76.0, 70.1 %), Cu (62.5 and 71.0 %), Cl (43.6, 24.4), B (33.3, 21.0 %), N-NO₃ (30.4, 49.6 %), Zn (29.5, 32.8 %), S-SO₄ (25.9, 25.5 %), K (24.5, 24.1 %), Fe (19.8, 19.2 %), Mn (17.5, 21.3 %) and Mg (14.9, 11.7). Advantageous effect of chloride on tomato yield justified the need to introduce for the practice adequate chlorine nutrition, and recommend to maintain 60 to 90 mg Cl·L^?1 in nutrient solution. The best yield appeared when content of chlorine in leaves (8th or 9th leaf from the top) was in the range 0.48-0.60 % of Cl in d. m.  相似文献   

A Spacio-Temporal Pattern of Pollen Sedimentation in a Dimictic Lake with Laminated Sediments     

Tomasz Mieszczankin 《Water, air, and soil pollution》1997,99(1-4):587-592

Resuspension in the main basin of Lake Go?ci?? results approximately a doubling of the total sedimentation rate in the deepest region. The increase pollen flux in bottom traps during overturn was more four times higher than in the upper traps. The most intensive pollen sedimentation was recorded before and just after freeze-up. This could only have been the result of previous sediment resuspension. Mechanisms of sedimentation in the studied lake showed that resuspension and resedimentation can change "the environmental record" of events even in a lake with laminated sediments. Higher sedimentation of pollen during autumn circulation confirmed that in the sediment layers (varves or laminae) particles from previous seasons also could have been found. In the bay pollen sedimentation was lower and depended on plant flowering, there was no resuspension.  相似文献   

Characterization of bioactive recombinant woodchuck interleukin-2 amplified by RLM-RACE and produced in eukaryotic expression system     

Gujar SA  Michalak TI 《Veterinary immunology and immunopathology》2006,112(3-4):183-198

Woodchucks (Marmota monax) infected with woodchuck hepatitis virus (WHV) represent a highly valuable laboratory model of hepatitis B virus (HBV) infection, in which molecular, immunological and pathological events occurring in infected humans are adequately reflected. To advance studies on T cell immune responses and propagation of hepadnavirus in T lymphocytes in this animal model, we determined the complete sequence of woodchuck interleukin-2 (wIL-2) cDNA by utilizing RNA ligase-mediated rapid amplification of cDNA ends (RLM-RACE) reaction. The wIL-2 sequence revealed a single open reading frame encoding for the predicted precursor protein comprised of a signal peptide and a 134 amino acid-long mature protein. The mature wIL-2 protein produced in the Escherichia coli expression system, designated as ec-rwIL-2, was found to be immunogenic but not biologically active. In contrast, precursor wIL-2 protein cloned into baculovirus transfer vector and expressed in Sf9 cells, designated as bac-rwIL-2, demonstrated functional competence. Further, bac-rwIL-2 was able to stimulate proliferation and to induce multiple daughter cell generations in woodchuck T cells, as well as facilitated the survival of standard IL-2-dependent mouse CTLL-2 cells in culture. Western blot analysis of bac-rwIL-2 using antibodies generated against ec-rwIL-2 revealed a single protein band of 15.5kDa. The availability of biologically active recombinant wIL-2 should facilitate ex vivo studies on functional competence of woodchuck T lymphocytes derived from different stages of hepadnaviral hepatitis and assist in recognizing their contribution to the pathogenesis of liver injury in the woodchuck model of hepatitis B.  相似文献   

Exogenous leptin advances puberty in domestic hen     

Paczoska-Eliasiewicz HE  Proszkowiec-Weglarz M  Proudman J  Jacek T  Mika M  Sechman A  Rzasa J  Gertler A 《Domestic animal endocrinology》2006,31(3):211-226

The present study was undertaken to examine the effect of recombinant chicken leptin administered to fed ad libitum and feed-restricted immature chickens of a layer strain on ovarian development and the timing of sexual maturity. In the first experiment 11-week-old pullets (77 days of age) fed ad libitum were injected daily with leptin at four dose levels (4, 16, 64 and 256 microg/kg body weight) until sexual maturity (lay of the first egg). Leptin treatment at the highest dose significantly (P<0.05) advanced the onset of puberty (day 116.3+/-1.0) in comparison to controls (day 121.3+/-1.2). The rises of luteinizing hormone, estradiol and progesterone in blood plasma were also advanced by leptin treatment. In the second experiment, both full-fed and feed-restricted pullets (79 days of age) were injected daily with leptin (256 microg/kg body weight). In birds fed ad libitum, exogenous leptin again significantly (P<0.05) advanced first ovipostion (day 118.4+/-1.4 versus day 124.4+/-1.7), while abolishing the significant (P<0.05) delay caused by feed restriction (day 131.5+/-1.6) and restoring the normal onset of sexual maturity (day 125.7+/-1.6). Analysis of the ovaries in 106-day-old pullets revealed that leptin injections advanced follicular development, particularly in birds fed ad libitum, and significantly (P<0.01) reduced follicular apoptosis both in full-fed and feed-restricted birds. In conclusion, we have shown that in female chickens exogenous leptin advances the onset of puberty by attenuation of ovarian apoptosis and enhancement of folliculogenesis.  相似文献   

A plant based sensing method for nutrition stress monitoring   总被引：1，自引：0，他引：1  

Dariusz Tomkiewicz  Tomasz Piskier 《Precision Agriculture》2012,13(3):370-383

Due to economical and ecological reasons it is important to provide the necessary flexibility in fertilizer management to respond to differences in plant nutrients requirements. Plant-based sensors have potential to provide more accurate and on-line information regarding crop bio-responses to environmental stress and could overcome limitations of traditional methods which focus only on monitoring parameters of soil. Current research regarding on-line plant stress sensing techniques concentrates on spectroscopic and image processing methods. These techniques have many limitations connected with their sensitivity to environmental interferences. In recent years, impedance spectroscopy has become a well-known non-invasive tool for describing the electrical properties of many systems. The research hypothesis tested was that information provided by Electrical Impedance Spectroscopy is correlated with tomato plant stress caused by lack of mineral nutrients in the growth medium. The experiment was conducted with two sets of hydroponically-grown tomato plants (Lycopersicon esculentum Mill., cv. ‘Maliniak’). During the experiment the tomato plants were fed alternately with flow of necessary nutrients and with distilled water. The impedance spectra were measured by scanning frequencies from 100 Hz to 50 kHz to determine the most sensitive frequency. A Nutrition Index was proposed for indicating variability of mineral nutrition within plants, and its correlation with experimental plant data was tested. Data showed that the relation between the Nutrition Index and the stress caused by lack of mineral nutrients in the growing medium was a monotonic function in the case of study. The results presented in the paper support the concept that the electrical impedance spectroscopy is a non-destructive, economical and reliable measurement method, which can be utilised for plant nutrition stress monitoring.  相似文献   

Growth and development of chicks of two species of partridge: the grey partridge (Perdix perdix) and the chukar (Alectoris chukar)     

Pis T 《British poultry science》2012,53(1):141-144

1. In two partridge species, the grey partridge (Perdix perdix) and chukar (Alectoris chukar), from hatching up to 120?d, the growth rate and development of body mass, wing, tarsus, and bill length were measured and fitted by Gompertz equations.

2. As a typical precocial species, partridges hatched with relatively well developed legs and bills, and wing growth followed a gradual development of thermoregulation.

3. Gompertz growth constants for body mass growth were 0·039 and 0·038 for grey partridges and chukars, respectively.

4. The allometric relationship between tarsus length and body mass followed a geometric similarity (1/3 power) in both grey partridges and chukars.  相似文献   

Effects of β-Hydroxy-β-Methylbutyrate and γ-Oryzanol on Blood Biochemical Markers in Exercising Thoroughbred Race Horses     

Piotr Ostaszewski  Agnieszka Kowalska  Ewa Szarska  Piotr Szpotański  Anna Cywinska  Bożena Bałasińska  Tomasz Sadkowski 《Journal of Equine Veterinary Science》2012

In both the horse and the man, nutritional ergogenic aids have been used to improve physical ability in conjunction with an appropriate training regimen. Although training increases physical condition, the ease of taking a nutritional additive to improve training results explains the demand for supplementation, which may increase mechanical energy of work, delay onset of fatigue, or improve neuromuscular coordination. The purpose of this study was to determine the effects of oral supplementation of β-hydroxy-β-methylbutyrate (HMB) and γ-oryzanol (GO) on indices of exercise-induced muscle damage in Thoroughbred race horses. In this 32-week study, the horses were assigned to either a placebo, GO (3.0 g/d), HMB (15 g/d), or GO and HMB treatment groups. The supplements were administered for the first 16 weeks of the study during the training period before the racing season began. Blood samples were taken at baseline, and then during training, before exercise, immediately after exercise, and 30 minutes after exercise. Heart rate and speed were monitored in each exercise session. Hematocrit, glucose, lactate (LA), creatine phosphokinase, and aspartate aminotransferase were measured before and after each exercise session. Analysis of variance showed a significantly greater increase in postexercise creatine kinase activity in placebo-supplemented group than in the other treatment groups, both in the training period and during the racing seasons (P < .05). Blood LA was higher immediately after exercise in the placebo group compared with the supplemented groups. In conclusion, supplementation with HMB and GO resulted in decreased creatine kinase and LA after exercise. These findings support the hypothesis that HMB and GO supplementation helps to prevent exercise-induced muscle damage.  相似文献   

Diversity of ectomycorrhizal fungus assemblages on nursery grown European beech seedlings     

Marcin Pietras  Maria Rudawska  Tomasz Leski  Leszek Karliński 《Annals of Forest Science》2013,70(2):115-121

? Context

An important feature of forest nursery management is the production of first-rate planting stock, which is closely connected with an adequate development of ectomycorrhizas on seedling roots.

? Aims

The aim of this study was to provide a detailed assessment of the ectomycorrhizal (ECM) fungal diversity of European beech grown in bare-root forest nursery conditions.

? Methods

Morphological and molecular analyzes were used to identify ECM fungi, quantify fungal richness, and record differences in the relative abundance of individual taxa.

? Results

Twenty-seven different mycorrhizal fungal taxa were found in four tested nurseries. Of these 27, only 6 were present in more than one nursery. Taxa richness in individual nurseries ranged from 6 to 13, indicating that ECM colonization potential is nursery-dependent. The most frequent taxa were: Tuber sp. 1, Cadophora sp., Cenococcum geophilum agg., Hebeloma sacchariolens, and Laccaria tortilis. According to the analysis of similarity, ECM fungal communities were significantly different between nurseries (R?=?0.7741; p?<?0.0001).

? Conclusion

Beech seedlings grown in bare-root nurseries are colonized by a highly diverse suite of ECM fungi; thus, artificial inoculation of seedlings is generally not necessary in nursery practice.  相似文献   

Modified flotation method with the use of Percoll for the detection of Isospora suis oocysts in suckling piglet faeces     

Karamon J  Ziomko I  Cencek T  Sroka J 《Veterinary parasitology》2008,156(3-4):324-328

The modification of flotation method for the examination of diarrhoeic piglet faeces for the detection of Isospora suis oocysts was elaborated. The method was based on removing fractions of fat from the sample of faeces by centrifugation with a 25% Percoll solution. The investigations were carried out in comparison to the McMaster method. From five variants of the Percoll flotation method, the best results were obtained when 2ml of flotation liquid per 1g of faeces were used. The limit of detection in the Percoll flotation method was 160 oocysts per 1g, and was better than with the McMaster method. The efficacy of the modified method was confirmed by results obtained in the examination of the I. suis infected piglets. From all faecal samples, positive samples in the Percoll flotation method were double the results than that of the routine method. Oocysts were first detected by the Percoll flotation method on day 4 post-invasion, i.e. one-day earlier than with the McMaster method. During the experiment (except for 3 days), the extensity of I. suis invasion in the litter examined by the Percoll flotation method was higher than that with the McMaster method. The obtained results show that the modified flotation method with the use of Percoll could be applied in the diagnostics of suckling piglet isosporosis.  相似文献