A DOC2 protein identified by mutational profiling is essential for apicomplexan parasite exocytosis     

Farrell A  Thirugnanam S  Lorestani A  Dvorin JD  Eidell KP  Ferguson DJ  Anderson-White BR  Duraisingh MT  Marth GT  Gubbels MJ 《Science (New York, N.Y.)》2012,335(6065):218-221

Exocytosis is essential to the lytic cycle of apicomplexan parasites and required for the pathogenesis of toxoplasmosis and malaria. DOC2 proteins recruit the membrane fusion machinery required for exocytosis in a Ca(2+)-dependent fashion. Here, the phenotype of a Toxoplasma gondii conditional mutant impaired in host cell invasion and egress was pinpointed to a defect in secretion of the micronemes, an apicomplexan-specific organelle that contains adhesion proteins. Whole-genome sequencing identified the etiological point mutation in TgDOC2.1. A conditional allele of the orthologous gene engineered into Plasmodium falciparum was also defective in microneme secretion. However, the major effect was on invasion, suggesting that microneme secretion is dispensable for Plasmodium egress.  相似文献   

Genetic analysis of yield and quantitative traits in pigeonpea (<Emphasis Type="Italic">Cajanus cajan</Emphasis> L. Millsp.)     

B. C. Ajay  B. N. Gnanesh  K. N. Ganapathy  M. Byre Gowda  P. S. Prasad  G. N. Veerakumar  S. C. Venkatesha  R. Abdul Fiyaz  K. T. Ramya 《Euphytica》2012,186(3):705-714

Basic information on genetics and inheritance of quantitative characters, which is necessary to develop future breeding programme, is not widely studied in pigeonpea. Hence, present study was conducted among 5 generations in four pigeonpea crosses to know significance of additive-dominance model, gene action involved in inheritance of quantitative characters, heritability and genetic advance. “Scaling” and “joint scaling test” was significant for most characters indicating that additive-dominance model alone is not enough to explain the inheritance of a character. Though additive variance was more, dominance variance also played important role for most of the traits. Positive and negative alleles were found to be distributed between parents. Additive gene effect (d) was significant for pods per plant and seeds per pod whereas dominance gene effect (h) was more predominant among pod yield and seed yield. Dominance × Dominance inter-allelic interactions (l) was more important than Additive × Additive type (i) for most of the traits studied which could be exploited by selecting individuals based on their performance in recurrent selection. Complementary gene action was observed among many traits with few exhibiting duplicate gene action. Heritability and genetic advance was high indicating the effectiveness of selection. Since dominance effects is also present along with additive effects selection could be practised in later generations to identify high yielding genotypes.  相似文献   

Leucine-tRNA initiates at CUG start codons for protein synthesis and presentation by MHC class I   总被引：1，自引：0，他引：1  

Starck SR  Jiang V  Pavon-Eternod M  Prasad S  McCarthy B  Pan T  Shastri N 《Science (New York, N.Y.)》2012,336(6089):1719-1723

Effective immune surveillance by cytotoxic T cells requires newly synthesized polypeptides for presentation by major histocompatibility complex (MHC) class I molecules. These polypeptides are produced not only from conventional AUG-initiated, but also from cryptic non-AUG-initiated, reading frames by distinct translational mechanisms. Biochemical analysis of ribosomal initiation complexes at CUG versus AUG initiation codons revealed that cells use an elongator leucine-bound transfer RNA (Leu-tRNA) to initiate translation at cryptic CUG start codons. CUG/Leu-tRNA initiation was independent of the canonical initiator tRNA (AUG/Met-tRNA(i)(Met)) pathway but required expression of eukaryotic initiation factor 2A. Thus, a tRNA-based translation initiation mechanism allows non-AUG-initiated protein synthesis and supplies peptides for presentation by MHC class I molecules.  相似文献   

Genomic characterization of drought tolerance-related traits in spring wheat     

Sundeep Kumar  Sunish Kumar Sehgal  Uttam Kumar  P. V. Vara Prasad  Arun Kumar Joshi  Bikram Singh Gill 《Euphytica》2012,186(1):265-276

Drought tolerance was investigated in ‘C306’, one of the most drought tolerant wheat cultivars bred in India in the 1960’s. An intervarietal mapping population of recombinant inbred lines of the cross ‘C306’ × ‘HUW206’ was evaluated for drought tolerance components, namely potential quantum efficiency of photosystem (PS) II (F_v/F_m), chlorophyll content (Chl), flag leaf temperature (Lt), and grain yield per plant (Gyp) under stress. Three independent experiments were conducted under well-watered and water-stressed conditions in greenhouses and growth chambers at Kansas State University (USA). Five hundred and sixty microsatellite markers covering the entire genome were screened for polymorphism between the parents. A QTL (QLt.ksu-1D) for Lt (low flag leaf temperature under stress) on the short arm of chromosome 1D between markers Xbarc271 and Xgwm337 at LOD 3.5 explained 37% of the phenotypic variation. A QTL for F_v/F_m (QF _v /F _m .ksu-3B) and Chl (QChl.ksu-3B) controlling quantum efficiency of PS II and chlorophyll content under stress were co-localized on chromosome 3B in the marker interval Xbarc68–Xbarc101 and explained 35–40% of the phenotypic variation for each trait. A QTL (QGyp.ksu-4A) for Gyp on chromosome 4A at a LOD value of 3.2 explained 16.3% of the phenotypic variation. Inconsistent QTLs were observed for F_v/F_m on chromosomes 3A, 6A, 2B, 4B, and 4D; for Chl on 3A, 6A, 2B and 4B; and for Lt on 1A, 3A 6A, 3B and 5B. The identified QTLs give a first glimpse of the genetics of drought tolerance in C306 and need to be validated in field experiments using the marker-phenotype linkages reported here.  相似文献   

Tracheal Morphologic and Protein Alterations Following Short-Term Cigarette Mainstream Smoke Exposure to Rats     

Charleata A. Carter  Manoj Misra  Robert R. Maronpot 《Journal of toxicologic pathology》2012,25(3):201-207

A short-term 5-day nose-only cigarette smoke exposure study was conducted in Fisher 344 rats to identify smoke-induced tracheal protein changes. Groups of 10 male and female 5 week old rats were assigned to 1 of 4 exposure groups. Animals received filtered air, or 75, 200 or 400 mg total particulate matter (TPM)/m³ of diluted 3R4F Kentucky reference cigarette mainstream smoke. Exposures were conducted for 3 hrs/day, for 5 consecutive days. Tracheas from half the rats were processed for pathology, and tracheas from the other half of the rats frozen immediately for proteomics. We hypothesized that smoke will activate tracheal inflammatory, apoptotic, proliferative, and stress-induced pathways. Mucosal epithelial toxicity from the inhaled material was evidenced by cilia shortening and loss of tracheal mucosal epithelium in smoke-exposed animals. Mucosal thinning occurred in all smoke-exposed groups with hyperplastic reparative responses in the 200 and 400 mg TPM/m³ groups. Tracheal lysates from control vs. treated animals were screened for 800 proteins using antibody-based microarray technology and subsequently the most changed proteins evaluated by Western blot. Tracheal proteins expressed at high levels that were markedly increased or decreased by smoke exposure depended on dose and gender and included caspase 5, ERK 1/2 and p38. Signaling pathways common between the morphologic and protein changes were stress, apoptosis, cell cycle control, cell proliferation and survival. Changes in identified proteins affected by smoke exposure were associated with tracheal mucosal pathology, may induce functional tracheal changes, and could serve as early indicators of tracheal damage and associated disease.  相似文献   

Characterisation and validation of housekeeping genes for qRT-PCR expression analysis in Pterophyllum scalare     

Sushila  Ngairangbam  Das  Basanta Kumar  Prasad  K. Pani  Tripathi  Gayatri 《Aquaculture International》2021,29(6):2387-2402

Aquaculture International - Quantitative real-time RT-PCR (qRT-PCR) is the most sensitive and advanced method to quantify the expression of target genes of animals including fish. However, the...  相似文献   

Transmission risk of human trichinellosis     

Katsuhisa Takumi  Peter Teunis  Manoj Fonville  Isabelle Vallee  Pascal Boireau  Karsten Nöckler  Joke van der Giessen 《Veterinary parasitology》2009,159(3-4):324-327

Trichinella is a food-borne parasitic zoonoses and human cases are still reported in Europe mainly due to the consumption of pig meat originating from small backyard farms. Infections originating from industrialized pig farming have not been reported for decades in Europe, due to control measures to prevent the transmission of Trichinella from wildlife by indoor housing and good management practices. Therefore, risk-based monitoring programs might replace individual carcass control in industrialized pig farming as described in EU legislation SANCO 2075/2005. Transmission of Trichinella species between wildlife and the risk that may pose to humans via consumption of contaminated pork meat has not been studied quantitatively. One pathway by which human trichinellosis can occur is the rat–pig–human route. To evaluate the transmission risk though this pathway the dose responses of rat, pig, and human were studied. Experimental T. spiralis infection was performed in rats with doses of as few as 10 parasites and the data set was analysed using a newly developed dose response model that describes larvae per gram (LPG). Experimental T. spiralis infection in pig was analysed in a similar way. Furthermore nine published outbreaks of human trichinellosis were analysed to determine the dose response in humans. The risk of human trichinellosis via the rat–pig–human transmission was simulated by the Monte Carlo method. A pair of female and male parasites representing the lowest infection pressure from the environment, led to the probability of human trichinellosis by consumption of 100 g of raw pork meat equal to 5% via the studied rat–pig–human pathway. In the absence of rodent control near the farm, a low infection pressure from wildlife presents a relatively high risk of human trichinellosis via consumption of uncooked pork meat.  相似文献   

Differentiation of infectious bursal disease viruses by restriction enzyme analysis of RT-PCR amplified VP1 gene sequence     

Tiwari AK  Kataria RS  Indervesh  Prasad N  Gupta R 《Comparative immunology, microbiology and infectious diseases》2003,26(1):47-53

In order to differentiate infectious bursal disease virus (IBDV) isolates/strains, a quick method of RT-PCR followed by restriction enzyme analysis of VP1 gene sequence is being reported for the first time. A 480 bp fragment, comprising one of the RNA dependent RNA polymerase motifs of VP1 gene sequence of an Indian classical virus, an attenuated vaccine strain, Georgia and two Indian field isolates, genetically similar to reported very virulent strains of IBDV, was amplified by RT-PCR. Restriction enzyme digestion of PCR products with Taq1 enzyme generated distinct profile for field isolates, different from the classical and attenuated viruses, whereas restriction profile with BstNI restriction enzyme was similar in all the viruses, irrespective of the pathotype. Therefore, the present results suggest that Taq1 digestion can be taken up for the differentiation of field isolates from the classical and vaccine strains. The sequence analysis of VPI gene of reported very virulent IBD viruses from Europe and Japan, using 'MapDraw' programme of Lasergene software, revealed similar restriction enzyme profile as in Indian field isolates.  相似文献   

Inhibition of egg development by phosphine in the cosmopolitan pest of stored products Liposcelis bostrychophila (Psocoptera: Liposcelididae)     

Nayak MK  Collins PJ  Pavic H  Kopittke RA 《Pest management science》2003,59(11):1191-1196

Phosphine-induced delay in development of eggs was investigated as a mechanism of resistance to this fumigant in Liposcelis bostrychophila Badonnel. One-day-old eggs of a susceptible and a strongly resistant strain of L bostrychophila were exposed to a range of phosphine concentrations for 6days at 30 (+/- 1) degrees C and 70 (+/- 2)% RH. Delay in mean hatching period occurred in both susceptible and resistant eggs, although it was more pronounced in the latter. A maximum delay of 2.65 days was recorded for eggs of the susceptible strain at 0.01 mg litre(-1) (the highest concentration at which eggs survived) and 13.39 days for the resistant strain at 1 mg litre(-1) (the highest concentration tested). Delay in egg development time was positively correlated with increasing phosphine concentration. Our results reveal that the most successful strategy to control resistant L bostrychophila is to apply relatively low concentrations of phosphine for extended exposure times (eg 0.05 mg litre(-1) for 16 days) that allow all eggs to hatch to the much less tolerant nymph stage.  相似文献   

Turkey herpesvirus and Marek's disease virus. A comparative appraisal.     

L B Prasad 《Comparative immunology, microbiology and infectious diseases》1979,2(2-3):335-358

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