Genetic Diversity and Structure of the Apiosporina morbosa Populations on Prunus spp     

Zhang J  Fernando WG  Remphrey WR 《Phytopathology》2005,95(8):859-866

ABSTRACT Populations of Apiosporina morbosa collected from 15 geographic locations in Canada and the United States and three host species, Prunus virginiana, P. pensylvanica, and P. padus, were evaluated using the sequence-related amplified polymorphism (SRAP) technique to determine their genetic diversity and population differentiation. Extensive diversity was detected in the A. morbosa populations, including 134 isolates from Canada and the United States, regardless of the origin of the population. The number of polymorphic loci varied from 6.9 to 82.8% in the geographic populations, and from 41.4 to 79.3% in the populations from four host genotypes based on 58 polymorphic fragments. In all, 44 to 100% of isolates in the geographic populations and 43.6 to 76.2% in populations from four host genotypes represented unique genotypes. Values of heterozygosity (H) varied from 2.8 to 28.3% in the geographic populations and 10.2 to 26.1% in the populations from four host genotypes. In general, the A. morbosa populations sampled from wild chokecherry showed a higher genetic diversity than those populations collected from other host species, whereas the populations isolated from cultivated chokecherry, P. virginiana 'Shubert Select', showed a reduction of genetic diversity compared with populations from wild P. virginiana. Significant population differentiation was found among both the geographic populations (P < 0.05) and populations from different host genotypes (P < 0.02). In the geographic populations, most of populations from cultivated and wild P. virginiana were closely clustered, and no population differentiation was detected except for the populations from Morris, Morden, and Winnipeg, Manitoba, Canada. Furthermore, the populations from P. virginiana in the same geographic locations had higher genetic identity and closer genetic distance to each other compared with those from different locations. Four populations from P. virginiana, P. pensylvanica, and P. padus, were significantly differentiated from each other (P < 0.02), except there was no differentiation between the Shubert Select and wild chokecherry populations (>P> = 0.334). Indirect estimation of gene flow showed that significant restricted gene flow existed between populations from different regions and host species. Gene flow rates (Nm) varied from <1 to 12.5, with higher gene flow rates among population pairs from the same host species (P = 1.000). The analysis of molecular variance revealed that a major genetic variance source came from the genetic variation among isolates within populations regardless of the origin and host genotype of the population. Although some locations had a limited number of isolates, the results of this study clearly showed that the genetic diversity and population differentiation of A. morbosa were closely associated with host genotypes and geographic locations, but mostly with the former.  相似文献   

Transient expression vectors for functional genomics,quantification of promoter activity and RNA silencing in plants     

Roger?P?HellensEmail author  Andrew?C?Allan  Ellen?N?Friel  Karen?Bolitho  Karryn?Grafton  Matthew?D?Templeton  Sakuntala?Karunairetnam  Andrew?P?Gleave  William?A?Laing 《Plant methods》2005,1(1):13

Background  

We describe novel plasmid vectors for transient gene expression using Agrobacterium, infiltrated into Nicotiana benthamiana leaves. We have generated a series of pGreenII cloning vectors that are ideally suited to transient gene expression, by removing elements of conventional binary vectors necessary for stable transformation such as transformation selection genes.  相似文献   

Cumulative effects of roads and logging on landscape structure in the San Juan Mountains,Colorado (USA)   总被引：11，自引：0，他引：11  

McGarigal  Kevin  Romme  William H.  Crist  Michele  Roworth  Ed 《Landscape Ecology》2001,16(4):327-349

In the southern Rocky Mountains of temperate North America, the effects of Euro-American activities on disturbance regimes and landscape patterns have been less ubiquitous and less straightforward in high-elevation landscapes than in low-elevation landscapes. Despite apparently little change in the natural disturbance regime, there is increasing concern that forest management activities related mainly to timber harvest and to the extensive network of roads constructed to support timber harvest, fire control, and recreation since the late 1800s have altered disturbance regimes and landscape structure. We investigated the magnitude of change in landscape structure resulting from roads and logging since the onset of timber harvest activities in 1950. We found limited evidence for significant impacts in our study area when all lands within the landscape were considered. The relatively minor changes we observed reflected the vast buffering capacity of the large proportion of lands managed for purposes other than timber (e.g., wilderness). Significant changes in landscape structure and fragmentation of mature forest were, however, evident on lands designated as suitable timberlands. Roughly half of the mature coniferous forest was converted to young stands; mean patch size and core area declined by 40% and 25%, respectively, and contrast-weighted edge density increased 2- to 3-fold. Overall, roads had a greater impact on landscape structure than logging in our study area. Indeed, the 3-fold increase in road density between 1950–1993 accounted for most of the changes in landscape configuration associated with mean patch size, edge density, and core area. The extent of area evaluated and the period over which change was evaluated had a large impact on the magnitude of change detected and our conclusions regarding the ecological significance of those changes. Specifically, the cumulative impact on landscape structure was negligible over a 10-year period, but was notable over a 40-year period. In addition, the magnitude of change in landscape structure between 1950–1993 varied as a function of landscape extent. At the scale of the 228000 ha landscape, change in landscape structure was trivial, suggesting that the landscape was capable of fully incorporating the disturbances with minimal impact. However, at intermediate scales of 1000–10000 ha landscapes, change in landscape structure was quite evident, suggesting that there may be an optimal range of scales for detecting changes in landscape structure within the study area.  相似文献   

Aqueous photolysis of niclosamide     

Graebing PW  Chib JS  Hubert TD  Gingerich WH 《Journal of agricultural and food chemistry》2004,52(4):870-878

The photodegradation of [(14)C]niclosamide was studied in sterile, pH 5, 7, and 9 buffered aqueous solutions under artificial sunlight at 25.0 +/- 1.0 degrees C. Photolysis in pH 5 buffer is 4.3 times faster than in pH 9 buffer and 1.5 times faster than in pH 7 buffer. In the dark controls, niclosamide degraded only in the pH 5 buffer. After 360 h of continuous irradiation in pH 9 buffer, the chromatographic pattern of the degradates was the same regardless of which ring contained the radiolabel. An HPLC method was developed that confirmed these degradates to be carbon dioxide and two- and four-carbon aliphatic acids formed by cleavage of both aromatic rings. Carbon dioxide was the major degradate, comprising approximately 40% of the initial radioactivity in the 360 h samples from both labels. The other degradates formed were oxalic acid, maleic acid, glyoxylic acid, and glyoxal. In addition, in the chloronitroaniline-labeled irradiated test solution, 2-chloro-4-nitroaniline was observed and identified after 48 h of irradiation but was not detected thereafter. No other aromatic compounds were isolated or observed in either labeled test system.  相似文献   

Genesis of the surgical forum: A historical view of the American College of Veterinary Surgeons     

Lumb WV 《Veterinary surgery : VS》2004,33(1):96-97

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Toxicity, dosage, and efficacy of vinorelbine (Navelbine) in dogs with spontaneous neoplasia     

Poirier VJ  Burgess KE  Adams WM  Vail DM 《Journal of veterinary internal medicine / American College of Veterinary Internal Medicine》2004,18(4):536-539

The purpose of this study was to evaluate short-term adverse effects and determine a safe dosage for vinorelbine (Navelbine)--a new semisynthetic vinca alkaloid--in dogs with malignant tumors. Nineteen dogs were treated with vinorelbine as a 5-minute IV infusion every 7 days at starting dosages ranging from 10 to 20 mg/m2. The median number of treatments per dog was 7 (range, 1-11). The maximum tolerated dosage varied between 15 and 18 mg/m2, and a starting dosage of 15 mg/m2 is recommended. Neutropenia was the dose-limiting toxicity. Although efficacy was a secondary endpoint of this dosage-finding study, 2 dogs with metastatic bronchoalveolar carcinoma experienced a partial response for an overall response rate of 12.5% in 16 dogs with gross measurable disease. Three dogs with microscopic disease were treated (incompletely excised bronchoalveolar carcinoma or lymph node metastatic disease). Two died of pulmonary metastatic disease 113 and 196 days posttreatment, and 1 is still alive after at least 730 days. The well-tolerated toxicity profile and clinical activity observed in dogs with bronchoalveolar carcinoma warrants further investigation.  相似文献   

Fundus pigment distribution in rhesus monkeys     

Dawson WW  Jeffery G  Dawson JC  Kessler MJ  Rodriguez J  Westergaard GC 《Veterinary ophthalmology》2004,7(6):391-396

There is growing evidence for an interaction among fundus pigmentation, character, geography and the function and structure of the outer retina. We examined three inbred groups of rhesus macaques (132 eyes) including all ages. One was a smaller (18 eyes) group. Coat colors were variations of brown-tan however, the smaller group had lighter 'golden' coats and colors. Fundus images were classified for pigmentation and its geographic distribution. In golden-coated animals there was bias toward nasal fundus hypopigmentation with the optic disk as a watershed demarcation zone, which extended in the superior-inferior direction. Temporal fundus hypopigmentation did not occur in the absence of nasal hypopigmentation. More common, darker coated samples showed a characteristic diffuse fundus pigmentation. There was no evidence for albinism or large variations in macular pigmentation. Rhesus monkeys can exhibit geographically controlled genetic development of fundus pigmentation. Hypopigmentation provides for access to the choroidal infrastructure.  相似文献   

Comparing micrometeorology of rain forests in Biosphere-2 and Amazon basin     

Muhammad Altaf Arain  William James Shuttleworth  Blake Farnsworth  John Adams  Omer Lutfi Sen 《Agricultural and Forest Meteorology》2000,100(4)

Micrometeorological variables measured in the BIOSPHERE-2 Center (B2C) enclosed rain forest biome for 1 year were compared with similar measurements made in the Amazon rain forest. In the B2C rain forest, the overlying glass and supporting structure significantly reduces (by approximately a factor of two) the incoming solar radiation. Monthly mean values of above-canopy and within-canopy air temperature, vapor pressure, and vapor pressure deficit are reasonably similar to those of the Amazon rain forest, but there are marked differences in the above-canopy values of these variables in the Arizona summer. Monthly mean diurnal trends also show significant differences. Measurements of vertical air temperature gradient clearly showed two very distinct environments in the 27.4 m high rain forest dome during daylight hours. There is a comparatively cool and fairly well-mixed environment (which is reasonably similar to that found in a natural rain forest) below about 10 m and a hot, thermally stable environment above about 15 m. The nature of the atmospheric turbulence within the B2C rain forest also is significantly different from that normally found in natural rain forests. There is little turbulent mixing above the forest canopy in this enclosed environment. These findings are important for guiding the operation and use of this experimental rain forest facility in future research and for understanding how the rain forest biome functions in an enclosed environment.  相似文献   

Microbial diversity and activity of disturbed soil in the northern Chihuahuan Desert   总被引：8，自引：0，他引：8  

X. Liu  William C. Lindemann  Walter G. Whitford  Robert L. Steiner 《Biology and Fertility of Soils》2000,32(3):243-249

 The effects of intense grazing, seasonal drought, and fire on soil microbial diversity (substrate utilization) and activity in a northern Chihuahuan Desert grassland were measured in summer 1997, winter 1998, and spring 1998. Intense livestock grazing was initiated in winter 1995, burning occurred in August 1994, and drought stresses were imposed from October 1994 to June 1997. Microbial diversity was inferred from the carbon substrate utilization patterns in both gram (+) and gram (–) Biolog plates. Microbial activity was estimated by the activity of selected enzymes. Neither microbial diversity nor activity was affected by grazing. The interaction of intense grazing and stress sub-treatments only occurred in spring for one set of diversity measurements. The maximum microbial diversity and activity occurred in the winter-drought-stress sub-plots in summer and spring. Burning reduced microbial diversity and most enzyme activities as compared to the control in summer and spring. Microbial diversity was also lower in summer-drought-stress sub-plots than in the control in summer and spring. Microbial diversity was highest in summer, intermediate in winter, and lowest in spring. Microbial activity was generally higher in summer and lower in winter. It was concluded that substrate availability was the most important factor affecting the diversity and activity of soil microorganisms within a season. Soil moisture was not the factor causing differences in microbial diversity and activity among the stress treatments, but it was a predictor for some microbial responses under a particular stress. Received: 12 August 1999  相似文献   

Diversity of boron-toxicity tolerance in lentil growth and yield   总被引：1，自引：0，他引：1  

Sui-Kwong Yau  William Erskine 《Genetic Resources and Crop Evolution》2000,47(1):55-62

Boron (B) toxicity is increasingly being recognized as a problem in arid areas of West Asia, where lentil is widely grown. This study investigated whether or not: (1) phenotypic variation of B-toxicity tolerance exists at the seedling stage in lentil, (2) such variation persists to affect adult performance, and (3) there is geographical diversity in seedling tolerance. Four experiments were conducted in a greenhouse. Boric acid was added and mixed uniformly into the soil-mix to prepare high-B soil. Experiment I screened 77 lentil lines randomly selected from ICARDA's international nurseries. Visual growth scores and foliar B-toxicity symptom scores were taken 4–5 weeks after sowing, and used as an indicator for B-toxicity tolerance. In Experiments II and III, four selected lines were studied beyond the seedling stage. In Experiment IV, 231 lentil accessions from seven different countries/regions of the world were screened. There were highly significant differences between the 77 lines in B-toxicity tolerance at the seedling stage as indicated by their degree of B-toxicity symptom, and plant growth. The two tolerant and two sensitive selections from Experiment I showed diverse performance up to maturity as reflected by their differences in leaflet loss, dry mass reduction, and seed yield when grown in high-B soil. There were significant differences in B-toxicity tolerance between the 231 accessions. On average, accessions from Afghanistan were the most tolerant, followed by those from India, Iraq, Syria, Europe, Ethiopia, and Nepal.  相似文献