Short-term effects of organo-mineral biochar and organic fertilisers on nitrogen cycling,plant photosynthesis,and nitrogen use efficiency     

Thi Thu Nhan Nguyen  Helen M. Wallace  Cheng-Yuan Xu  Zhihong Xu  Michael B. Farrar  Stephen Joseph  Lukas Van Zwieten  Shahla Hosseini Bai 《Journal of Soils and Sediments》2017,17(12):2763-2774

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Eastern equine encephalitis in dogs.     

Michele D Farrar  Debra L Miller  Charles A Baldwin  Shane L Stiver  Clint L Hall 《Journal of veterinary diagnostic investigation》2005,17(6):614-617

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Gemmae: a role in sexual reproduction in the fern genus vittaria     

Emigh VD  Farrar DR 《Science (New York, N.Y.)》1977,198(4314):297-298

Gemmae are generally defined as vegetative propagules. In the shoestring ferns, Vittaria, gemmae grown in the presence of mature gametophyte plants or on medium containing gibberellic acid produce antheridia in lieu of vegetative growth. This suggests that antheridial differentiation in Vittaria is controlled by a chemical antheridogen system similar to those described in other fern genera. In natural populations of Vittaria gametophytes composed primarily of long-lived individuals, gemmae may provide the only source of tissue susceptible to antheridogen action and may have evolved in response to that condition.  相似文献   

A systematic review-meta-analysis of chilling interventions and a meta-regression of various processing interventions for Salmonella contamination of chicken     

Bucher O  Farrar AM  Totton SC  Wilkins W  Waddell LA  Wilhelm BJ  McEwen SA  Fazil A  Rajić A 《Preventive veterinary medicine》2012,103(1):1-15

Context

The results of individual studies investigating the efficacy of chilling and other processing interventions on Salmonella prevalence or concentration in broiler chicken carcasses are inconsistent or contradictory.

Objective

Determine efficacy of chilling on reducing Salmonella prevalence or concentration on broiler carcasses using systematic review-meta-analysis, and explore sources of heterogeneity among studies investigating various processing interventions through meta-regression.

Data sources

A comprehensive search included electronic search in six databases, manual search of reference lists of topic-related articles, and consultation with five topic experts to assure that all relevant intervention research was identified.

Study inclusion

Primary intervention research, published in English, encompassing control, challenge, cohort, or before-and-after study designs investigating the efficacy of any chilling or other processing interventions on Salmonella prevalence or concentration in broiler chicken carcasses.

Risk of bias assessment and data extraction

Data pertaining to study methodology and reported results, chilling or other processing intervention parameters, populations sampled and outcomes measured were assessed for methodological soundness and extracted by two independent reviewers using pretested checklists.

Results

Random-effects meta-analyses of immersion chilling with chlorine (n = 9 trials), acetic acid (n = 16) and potable water (n = 13) trended towards reductions in the odds or log₁₀ CFU/ml of Salmonella. Significant heterogeneity (P-value ≤ 0.1 and I² > 25%) precluded the reporting of pooled summary effect estimates. Meta-regression of all processing interventions indicated that serotype, disinfectant type and treatment time and pH were significantly associated with studies reporting reductions in concentration while study design, population sampled, study setting, publication date, intervention and disinfectant type, and treatment pH were significantly associated with studies reporting reductions in prevalence. Methodological and reporting flaws were consistently observed in relevant intervention research as well as a lack of studies conducted under commercial conditions and using Salmonella concentration outcomes.

Conclusions

Chilling may be effective at reducing Salmonella concentration and prevalence, but significant heterogeneity precluded reporting of pooled summary effect estimates for many chilling interventions. Investigations into potential sources of heterogeneity among all processing interventions found that the use of other chemical disinfectants, such as organic acids and surfactants might result in larger reductions in Salmonella contamination than more commonly utilized oxidizing agents like chlorine.  相似文献   

Soil- and enantiomer-specific metabolism of amino acids and their peptides by Antarctic soil microorganisms     

Paul W. Hill  Mark Farrell  Paula Roberts  John Farrar  Helen Grant  Kevin K. Newsham  David W. Hopkins  Richard D. Bardgett  Davey L. Jones 《Soil biology & biochemistry》2011,43(12):2410-2416

Most nitrogen (N) enters many Arctic and Antarctic soil ecosystems as protein. Soils in these polar environments frequently contain large stocks of proteinaceous organic matter, which has decomposed slowly due to low temperatures. In addition to proteins, considerable quantities of d-amino acids and their peptides enter soil from bacteria and lengthy residence times can lead to racemisation of l-amino acids in stored proteins. It has been predicted that climate warming in polar environments will lead to increased rates of soil organic N turnover (i.e. amino acids and peptides of both enantiomers). However, our understanding of organic N breakdown in these soils is very limited. To address this, we tested the influence of chain length and enantiomeric composition on the rate of breakdown of amino acids and peptides in three contrasting tundra soils formed under the grass, moss or lichen-dominated primary producer communities of Signy Island in the South Orkney Islands. Both d- and l-enantiomers of the amino acid monomer were rapidly mineralized to CO₂ at rates in line with those found for l-amino acids in many other terrestrial ecosystems. In all three soils, l-peptides were decomposed faster than their amino acid monomer, suggesting a different route of microbial assimilation and catabolism. d-peptides followed the same mineralization pattern as l-peptides in the two contrasting soils under grass and lichens, but underwent relatively slow decomposition in the soil underneath moss, which was similar to the soil under the grass. We conclude that the decomposition of peptides of l-amino acids may be widely conserved amongst soil microorganisms, whereas the decomposition of peptides of d-amino acids may be altered by subtle differences between soils. We further conclude that intense competition exists in soil microbial communities for the capture of both peptides and amino acids produced from protein breakdown.  相似文献   

Biochar co-applied with organic amendments increased soil-plant potassium and root biomass but not crop yield     

Farrar  Michael B.  Wallace  Helen M.  Xu  Cheng-Yuan  Joseph  Stephen  Dunn  Peter K.  Nguyen  Thi Thu Nhan  Bai  Shahla Hosseini 《Journal of Soils and Sediments》2021,21(2):784-798

Journal of Soils and Sediments - Biochar can improve soil nutrient retention and alleviate salinity; however, use is not widespread due to cost. Biochar is usually co-applied with a full-rate of...  相似文献   

Comparison of Force Plate Gait Analysis and Owner Assessment of Pain Using the Canine Brief Pain Inventory in Dogs with Osteoarthritis     

D.C. Brown  R.C. Boston  J.T. Farrar 《Journal of veterinary internal medicine / American College of Veterinary Internal Medicine》2013,27(1):22-30

Background

Lameness assessment using force plate gait analysis (FPGA) and owner assessment of chronic pain using the Canine Brief Pain Inventory (CBPI) are valid and reliable methods of evaluating canine osteoarthritis. There are no studies comparing these 2 outcome measures.

Objective

Evaluate the relationship between CBPI pain severity (PS) and interference (PI) scores with the vertical forces of FPGA as efficacy measures in canine osteoarthritis.

Animals

Sixty‐eight client‐owned dogs with osteoarthritis (50 hind limb and 18 forelimb).

Methods

Double‐blind, randomized. Owners completed the CBPI, and dogs underwent FPGA on days 0 and 14. Dogs received carprofen or placebo on days 1 through 14. The change in PS and PI scores from day 0 to 14 were compared to the change in peak vertical force (PVF) and vertical impulse (VI).

Results

PS and PI scores significantly decreased in carprofen‐ compared with placebo‐treated dogs (P = .002 and P = .03, respectively). PVF and VI significantly increased in carprofen‐ compared with placebo‐treated dogs (P = .006 and P = .02, respectively). There was no correlation or concordance between the PS or PI score changes and change in PVF or VI.

Conclusions and Clinical Importance

In these dogs with hind limb or forelimb osteoarthritis, owner assessment of chronic pain using the CBPI and assessment of lameness using FPGA detected significant improvement in dogs treated with carprofen. The lack of correlation or concordance between the change in owner scores and vertical forces suggests that owners were focused on behaviors other than lameness when making efficacy evaluations in their dogs.  相似文献   

Decoupling of microbial glucose uptake and mineralization in soil     

Paul W. Hill  John F. Farrar  David L. Jones 《Soil biology & biochemistry》2008,40(3):616-624

The rate of organic matter turnover in soil is a critical component of the terrestrial carbon cycle and is frequently estimated from measurements of respiration. For estimates to be reliable requires that isotopically labelled substrate uptake into the soil microbial biomass and its subsequent mineralization occurs almost simultaneously (i.e. no time delay). Here we investigated this paradigm using glucose added to an agricultural soil. Immediately after collection from the field, various concentrations of ¹⁴C-labeled glucose (1 μM to 10 mM) were added to soil and the depletion from the soil solution measured at 1–60 min after substrate addition. ¹⁴CO₂ production from the mineralization of glucose was simultaneously measured. The microbial uptake of glucose from soil solution was concentration-dependent and kinetic analysis suggests the operation of at least two distinct glucose transport systems of differing affinity. At glucose concentrations reflecting those naturally present in the soil solution (54±10 μM), the half-time (t_1/2) of exogenous glucose was extremely rapid at ca. 30 s. At higher glucose concentrations (100 μM to 10 mM), the t_1/2 values for the high-affinity carrier were altered little, but increasing proportions of glucose were taken up by the low affinity transport system. Glucose mineralization by the soil microbial community showed a significant delay after its uptake into the microbial biomass suggesting a decoupling of glucose uptake and subsequent respiration, possibly by dilution of glucose in labile metabolite pools. By fitting a double first order kinetic equation to the mineralization results we estimated the t_1/2 for the first rapid phase of respiration at natural soil solution glucose concentrations to be 6–8 min, but at least 87% of the added glucose was retained in the microbial biomass prior to mineralization. Our results suggest that in this soil the soil solution glucose pool turns over 100–1000 times each day, an order of magnitude faster than when determined from measurements of mineralization. These results imply that traditional isotopic based measurements of substrate turnover measured using CO₂ may vastly underestimate their rate of cycling in soil.  相似文献   

Prediction of macronutrients in plant leaves using chemometric analysis and wavelength selection     

Malmir  Mohammad  Tahmasbian  Iman  Xu  Zhihong  Farrar  Michael B.  Bai  Shahla Hosseini 《Journal of Soils and Sediments》2020,20(1):249-259

Purpose

Fast and real-time prediction of leaf nutrient concentrations can facilitate decision-making for fertilisation regimes on farms and address issues raised with over-fertilisation. Cacao (Theobroma cacao L.) is an important cash crop and requires nutrient supply to maintain yield. This project aimed to use chemometric analysis and wavelength selection to improve the accuracy of foliar nutrient prediction.

Materials and methods

We used a visible-near infrared (400–1000 nm) hyperspectral imaging (HSI) system to predict foliar calcium (Ca), potassium (K), phosphorus (P) and nitrogen (N) of cacao trees. Images were captured from 95 leaf samples. Partial least square regression (PLSR) models were developed to predict leaf nutrient concentrations and wavelength selection was undertaken.

Results and discussion

Using all wavelengths, Ca (R²_CV?=?0.76, RMSE_CV?=?0.28), K (R²_CV?=?0.35, RMSE_CV?=?0.46), P (R²_CV?=?0.75, RMSE_CV?=?0.019) and N (R²_CV?=?0.73, RMSE_CV?=?0.17) were predicted. Wavelength selection increased the prediction accuracy of Ca (R²_CV?=?0.79, RMSE_CV?=?0.27) and N (R²_CV?=?0.74, RMSE_CV?=?0.16), while did not affect prediction accuracy of foliar K (R²_CV?=?0.35, RMSE_CV?=?0.46) and P (R²_CV?=?0.75, RMSE_CV?=?0.019).

Conclusions

Visible-near infrared HSI has a good potential to predict Ca, P and N concentrations in cacao leaf samples, but K concentrations could not be predicted reliably. Wavelength selection increased the prediction accuracy of foliar Ca and N leading to a reduced number of wavelengths involved in developed models.

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Nonfatal occupational injury among California farm operators     

McCurdy SA  Farrar JA  Beaumont JJ  Samuels SJ  Green RS  Scott LC  Schenker MB 《Journal of agricultural safety and health》2004,10(2):103-119

We conducted a population-based telephone survey addressing farm-work-related (FWR) injuries among California farm operators. Of 1947 participants (80.4% response), 135 farm operators reported 160 FWR injuries in the preceding year, yielding a one-year cumulative incidence for any FWR injury of 6.9% (95% CI 5.8%-8.2%), or a mean 8.2 FWR injuries per 100 farmers in the preceding year (95% CI 6.8-9.7). Multiple injury events in the same individual occurred more frequently than predicted by chance. Sprains and strains (29.4%) were the most frequently reported injury and predominantly involved the back. Overexertion represented the most frequent external cause (24.2%), followed by machinery (14.3%), falls (13.0%), and animals (12.4%). Factors associated with FWR injury included white ethnicity (OR 3.19; 95% CI 1.38-7.36), increased annual hours worked on the farm, low levels of administrative work, and increased percentage of time working with livestock. FWR injury experience of California farm operators is comparable with that reported for other agricultural populations. Above-expected frequency of multiple injuries supports involvement of personal or environmental risk factors. Preventive efforts should focus on higher-risk groups and preventing overexertion and muscle strain and injury related to machinery, falls, and animals, especially livestock.  相似文献