Habitat assessment for forest dwelling species using LiDAR remote sensing: Capercaillie in the Alps   总被引：2，自引：0，他引：2  

Roland F. Graf  Lukas Mathys  Kurt Bollmann 《Forest Ecology and Management》2009

Large-scale information on habitat suitability is indispensable for planning management actions to further endangered species with large-spatial requirements. So far, remote sensing based habitat variables mostly included environmental and land cover data derived from passive sensors, but lacked information on vegetation structure. This is a serious constraint for the management of endangered species with specific structural requirements. Light detection and ranging (LiDAR), in contrast to passive remote sensing techniques, may bridge this gap in structural information at the landscape scale. We investigated the potential of LiDAR data to quantify habitat suitability for capercaillie (Tetrao urogallus), an endangered forest grouse in Central Europe, in a forest reserve of 17.7 km². We used continuous variables of horizontal and vertical stand structure from first and last pulse LiDAR data and presence–absence information from field work to model habitat suitability with generalized linear models (GLM). The two final habitat suitability models explained the observed presence–absence pattern moderately well (AUC of 0.71 and 0.77) with horizontal structure explaining better than vertical structure. Relative tree canopy cover was the most important variable with intermediate values indicating highest habitat suitability. As such, LiDAR allowed us to translate the results from habitat modeling at the landscape scale to effective management recommendations at the local scale at a level of detail that hitherto was unavailable for large areas. LiDAR thus enabled us to integrate individual habitat preferences at the scale of entire populations and thus offers great potential for effective habitat monitoring and management of endangered species.  相似文献   

Monitoring the dynamics of wheat stem elongation: genotypes differ at critical stages     

Lukas Kronenberg  Kang Yu  Achim Walter  Andreas Hund 《Euphytica》2017,213(7):157

Stem elongation is a critical phase for yield formation in wheat (Triticum aestivum). This study proposes the use of terrestrial laser scanning (TLS) for phenotyping of growth dynamics during wheat stem elongation in high temporal resolution and high throughput in the field. TLS was implemented on a novel field phenotyping platform carrying a cable suspended sensor head moveable in 3D over a 1 ha field. Canopy height was recorded on 335 winter wheat genotypes across two consecutive years. Scans were done in 3-d intervals during the stem elongation phase. Per day, 714 plots (two replications plus checks) were scanned within 3.5 h. The results showed that canopy height increased linearly with thermal time. Based on this linearity, 15 and 95% of final height were used as proxy measures for the onset and termination of stem elongation, respectively. We observed high heritability between 0.76 and 0.91 for the onset, termination and duration of stem elongation. The onset of stem elongation showed a positive covariance with the termination of stem elongation and final height indicating some regulatory dependencies. Yet there was no apparent relationship between onset and duration of stem elongation. Due to its precision, the TLS method allows to measure the dynamics of stem elongation in large sets of genotypes. This in turn offers opportunities to investigate the genetic control of the transitions between early vegetative growth, stem elongation and flowering. Understanding the genetic control of these transitions is an important milestone towards knowledge-based crop improvement.  相似文献   

Effects of poly‐ and monodisperse surfactants on14C‐epoxiconazole diffusion in isolated cuticles of Prunus laurocerasus     

Andrea Gutenberger  Viktoria V Zeisler  Rainer Berghaus  Helmut Auweter  Lukas Schreiber 《Pest management science》2013,69(4):512-519

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WHOLE BODY COMPUTED TOMOGRAPHIC CHARACTERISTICS OF SKELETAL AND CARDIAC MUSCULAR METASTATIC NEOPLASIA IN DOGS AND CATS     

Massimo Vignoli  Rossella Terragni  Federica Rossi  Lukas Frühauf  Barbara Bacci  Lorenzo Ressel  Ombretta Capitani  Laura Marconato 《Veterinary radiology & ultrasound》2013,54(3):223-230

Muscular metastatic neoplasia has been reported to be rare in domestic animals, however previous studies were based primarily on necropsy findings. The purpose of this retrospective study was to describe whole body computed tomography (CT) characteristics of confirmed muscular metastases in a cohort of dogs and cats presented for oncology evaluation. Medical records of 1201 oncology patients were reviewed. Included animals underwent pre and postcontrast whole body CT, and CT‐guided tru‐cut biopsy or fine needle aspiration of one or more metastatic lesions. Twenty‐one dogs and six cats met inclusion criteria, representing 2.08% of all canine oncology patients and 3.1% of all feline oncology patients. Mean age was 9.6 years. Postcontrast CT characteristics included well‐demarcated, oval‐to‐round lesions with varying enhancement patterns: ring enhancing (n = 16), heterogeneously enhancing (n = 8), or homogeneously enhancing (n = 5). Five animals showed concurrent and varying nodular patterns. In seven cases (five dogs and two cats), one single muscular nodule was observed. In 20 cases, two or more lesions were observed. In two cases, cardiac hypodense nodules were observed in the postcontrast CT, while appearing isodense in the precontrast study. Necropsy confirmed neoplasia in both of them. Locations of muscular metastases included epaxial/paraspinal muscles of the cervical, thoracic, and lumbar spine (n = 18), superficial muscles of the thoracic wall (n = 13), scapular/shoulder region (n = 3), hind limb (n = 3), and abdominal wall muscles (n = 1). Findings supported the use of pre and postcontrast whole body CT for oncologic staging in dogs and cats, especially for primary tumors characterized by a high metastatic rate.  相似文献   

Analysis of a marine phototrophic biofilm by confocal laser scanning microscopy using the new image quantification software PHLIP     

Lukas N Mueller  Jody FC de Brouwer  Jonas S Almeida  Lucas J Stal  João B Xavier 《BMC ecology》2006,6(1):1-15

Background  

Confocal laser scanning microscopy (CLSM) is the method of choice to study interfacial biofilms and acquires time-resolved three-dimensional data of the biofilm structure. CLSM can be used in a multi-channel modus where the different channels map individual biofilm components. This communication presents a novel image quantification tool, PHLIP, for the quantitative analysis of large amounts of multichannel CLSM data in an automated way. PHLIP can be freely downloaded from .  相似文献   

Large-arena field cage releases of a candidate classical biological control agent for spotted wing drosophila suggest low risk to non-target species     

Seehausen  M. Lukas  Valenti  Riccardo  Fontes  Jo&#;o  Meier  Michela  Marazzi  Cristina  Mazzi  Dominique  Kenis  Marc 《Journal of pest science》2022,95(3):1057-1065

Journal of Pest Science - Classical biological control, i.e., the introduction of natural enemies from an invasive pest’s area of origin, has been proposed repeatedly to control the spotted...  相似文献   

Authentication of animal fats using direct analysis in real time (DART) ionization-mass spectrometry and chemometric tools   总被引：1，自引：0，他引：1  

Vaclavik L  Hrbek V  Cajka T  Rohlik BA  Pipek P  Hajslova J 《Journal of agricultural and food chemistry》2011,59(11):5919-5926

A combination of direct analysis in real time (DART) ionization coupled to time-of-flight mass spectrometry (TOFMS) and chemometrics was used for animal fat (lard and beef tallow) authentication. This novel instrumentation was employed for rapid profiling of triacylglycerols (TAGs) and polar compounds present in fat samples and their mixtures. Additionally, fat isolated from pork, beef, and pork/beef admixtures was analyzed. Mass spectral records were processed by principal component analysis (PCA) and stepwise linear discriminant analysis (LDA). DART-TOFMS profiles of TAGs were found to be more suitable for the purpose of discrimination among the examined fat types as compared to profiles of polar compounds. The LDA model developed using TAG data enabled not only reliable classification of samples representing neat fats but also detection of admixed lard and tallow at adulteration levels of 5 and 10% (w/w), respectively. The presented approach was also successfully applied to minced meat prepared from pork and beef with comparable fat content. Using the DART-TOFMS TAG profiles of fat isolated from meat mixtures, detection of 10% pork added to beef and vice versa was possible.  相似文献   

Quantifying fenbendazole and its metabolites in self-medicating wild red grouse Lagopus lagopus scoticus using an HPLC-MS-MS approach     

Adam A  Webster LM  Mullen W  Keller LF  Johnson PC 《Veterinary parasitology》2011,177(3-4):383-386

On red grouse estates in the UK the nematode parasite Trichostrongylus tenuis is often controlled by application of grit medicated with the anthelmintic fenbendazole (FBZ). To date, assessment of the efficacy has been inhibited by the inability to quantify uptake of FBZ by the birds. We have developed a simple and sensitive HPLC-MS-MS method for detecting and quantifying FBZ and its metabolites from a 300 mg sample of red grouse liver. This method could be used to improve the efficacy of medicated grit treatment by allowing the identification of conditions and application methods that optimize the uptake of FBZ. With the necessary modifications, our method will also be applicable to other wildlife species where self-medication is used for parasite control.  相似文献   

Regulation of replication fork progression through histone supply and demand     

Groth A  Corpet A  Cook AJ  Roche D  Bartek J  Lukas J  Almouzni G 《Science (New York, N.Y.)》2007,318(5858):1928-1931

DNA replication in eukaryotes requires nucleosome disruption ahead of the replication fork and reassembly behind. An unresolved issue concerns how histone dynamics are coordinated with fork progression to maintain chromosomal stability. Here, we characterize a complex in which the human histone chaperone Asf1 and MCM2-7, the putative replicative helicase, are connected through a histone H3-H4 bridge. Depletion of Asf1 by RNA interference impedes DNA unwinding at replication sites, and similar defects arise from overproduction of new histone H3-H4 that compromises Asf1 function. These data link Asf1 chaperone function, histone supply, and replicative unwinding of DNA in chromatin. We propose that Asf1, as a histone acceptor and donor, handles parental and new histones at the replication fork via an Asf1-(H3-H4)-MCM2-7 intermediate and thus provides a means to fine-tune replication fork progression and histone supply and demand.  相似文献   

Effect on Growth, Survival, and Fatty Acid Composition of Australian Red Claw Crayfish Cherax quadricarinatus Fed Practical Diets With and Without Supplemental Lecithin and/or Cholesterol     

Kenneth R.  Thompson  Laura A.  Muzinic  Tracey D.  Christian Carl D.  Webster David B.  Rouse Lukas  Manomaitis 《Journal of the World Aquaculture Society》2003,34(1):1-10

Red claw crayfish Cherux quadricarinatus is one of more than a hundred species of Australian freshwater crayfish. However, because of its rapid growth rate, communal and non‐burrowing behavior, ease of spawning, wide temperature and dissolved oxygen tolerance, and no free‐swimming larval stages, red claw may be the best candidate among the Australian crayfishes for semi‐intensive or intensive aquaculture in the United States. The objective of the study was to examine the effects of growth, survival, and fatty acid composition of newly‐hatched red claw when fed four practical diets with or without lecithin and cholesterol. However, little is known of its nutritional requirements or practical diet formulations. An 8‐wk feeding trial was conducted in a recirculating system with newly‐hatched juvenile (mean individual weight, 0.2 g) red claw, each stocked in separate plastic mesh culture units containing their own individual water line. Water was recirculated through biological and mechanical filters. Practical diets were formulated to be isonitrogenous (40% protein) and isocaloric (4 kcal available enerpy/g of diet) and contained menhaden fish meal (25%), soybean meal (35%, except in Diet 4), and shrimp meal (10%, except in Diet 4) as protein sources. Diet 1 had 0.5% lecithin added and 1.0% cholesterol added: Diet 2 contained 0% lecithin and 1.0% cholesterol; Diet 3 contained 0.5% lecithin and 0% cholesterol: and Diet 4 contained 0% lecithin and 0% cholesterol. After 8 wk, juvenile red claw fed diets with 0% supplemental lecithin (Diets 2 and 4) had no significant difference (P >0.05) in final weight and percentage weight gain (5.6 g and 2626%. respectively) compared to red claw fed the control diet (Diet 1) containing 0.5% lecithin. Red claw fed a diet without added cholesterol (Diet 3) had significantly (P 0.05) lower final weight (3.6 g) and percentage weight gain (1,717%) compared to red claw fed the control diet (Diet 1). However, red claw fed Diet 4 (containing 0% added cholesterol and 0% added lecithin) showed no significant (P >0.05) difference in final weight (5.1 g) and percentage weight gain (2254%) compared to red claw fed all other diets. There was no significant difference (P >0.05) among all diets for specific growth rate (SGR) which averaged 5.38%/d. Percentage survival was not significantly different among all treatments and was 76% for red claw fed Diet 1, 64% (Diet 2), 56% (Diet 3), and 80% (Diet 4). These results indicate that red claw fed Diet 4 containing 25% menhaden fish meal, 44.5% soybean meal, 0.5% choline chloride, 2% cod liver oil and 1% corn oil may satisfy the lecithin and cholesterol requirements and that the addition of dietary lecithin and cholesterol may not be necessary for good growth and survival of small (0.2 g) juvenile red claw. This may allow for less expensive diet formulations for use by producers of red claw crayfish.  相似文献