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11.
大花君子兰叶绿体基因组及其特征 总被引:3,自引:0,他引:3
采用Illumina MiSeq测序平台对大花君子兰(Clivia miniata)叶片总DNA进行测序,通过组装获得了其叶绿体基因组(cpDNA)全长序列(158 114 bp)。对其cpDNA注释得到135个基因,包含87个蛋白编码基因、40个tRNA基因和8个rRNA基因。采用生物信息学方法对获得的cpDNA进行简单序列重复(SSR)分析和密码子偏好性分析。结果显示:①大花君子兰cpDNA中共有61个SSR位点,其中单核苷酸、二核苷酸、三核苷酸、四核苷酸、五核苷酸和六核苷酸重复数分别为38、9、2、8、3和1个,多数SSR分布在基因间隔区;②大花君子兰cpDNA密码子偏爱以A或U(T)结尾,亮氨酸使用频率最高,半胱氨酸使用频率最低。基于24种植物的cpDNA全长和23种植物的叶绿体ycf2基因序列进行系统发育分析,结果显示大花君子兰与石蒜科植物在同一分支,显示最近的亲缘关系,支持大花君子兰属于石蒜科。基于叶绿体ycf2的系统发育分析结果与基于cpDNA全长的系统发育分析研究结果大部分相同,支持ycf2基因可以代替cpDNA全长用于植物系统发育分析。 相似文献
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Ruimin Chao Chengqiang Xia Caixia Pei Wenjie Huo Qiang Liu Chunxiang Zhang Youshe Ren 《Journal of animal physiology and animal nutrition》2021,105(1):26-34
The objective of this study was to investigate the characteristics of ruminal microbial communities of alpacas (Lama pacos) and sheep (Ovis aries) fed three diets with varying ratios of roughage (corn stalk) to concentrate, 3:7 (LS), 5:5 (MS) and 7:3 (HS). Six alpacas (one-year-old and weighing 29.5 ± 7.1 kg) and six sheep (one-year-old and weighing 27.9 ± 2.7 kg) were used in this study, in a replicated 3 × 3 Latin square experiment. Total protozoa concentration was determined under the microscope; total fungi and methanogens were assessed using quantitative polymerase chain reaction and expressed as a percentage of total bacterial 16S rRNA gene copies; bacterial communities were investigated by targeted 16S rRNA gene (V3–V4 region) sequencing. The percentage of fungi was significantly higher in alpacas than in sheep under the LS diet, while the concentration of protozoa was significantly lower in alpacas under HS, MS and LS diets. The alpha diversity including Shannon, Chao l and ACE indices of bacterial communities was higher in alpacas than in sheep, under the LS diet. A total of 299 genera belonging to 22 phyla were observed in the forestomach of alpaca and sheep, with Bacteroidetes and Firmicutes dominating both animal species. Phyla Armatimonadetes and Fusobacteria, as well as 64 genera, were detected only in alpacas, whereas phyla Acidobacteria and Nitrospira, as well as 44 genera, were found only in sheep. The abundance of cellulolytic bacteria, including Butyrivibrio and Pseudobutyrivibrio, was higher in alpacas than in sheep under all three diets. These differences in the forestomach microbial communities partly explained why alpacas displayed a higher poor-quality roughage digestibility, and a lower methane production. Results also revealed that the adverse effects of high-concentrate diets (70%) were lesser in alpacas than in sheep. 相似文献
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泵的叶轮扫掠蜗壳隔舌时产生的压力脉动是引起船用泵振动噪声的原因之一.为尽可能弱化这一影响,分别设计了叶片出口边与前后盖板基本面垂直和倾斜的2种不同形式叶轮,将其配置在相同的双蜗壳中,通过数值计算与样机试验相结合的手段,对蜗壳内9个不同位置的压力脉动情况进行对比分析.结果表明:出口边倾斜的叶轮相比于出口边垂直的叶轮可明显改善蜗壳内次脉动的“驼峰”现象,且可以进一步降低隔舌处主波动的压力峰值;对蜗壳内2个隔舌稍前的位置,出口边倾斜的叶轮反而会使得该点的压力系数幅值明显增大,且该点主波动的周期数发生改变;2种叶轮出口边的不同形式对蜗壳出口位置的压力脉动的影响基本相同;采用出口边倾斜叶轮对改善因叶轮与隔舌间的液流压力脉动是可行的. 相似文献
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Fa-chao SUN Min TAN Yuan-chao ZHANG Yu-chao WANG Sheng-liang CAO Guo-fei DING Fang-yuan CONG Li-hong GUO Si-dang LIU Yi-hong XIAO 《农业科学学报》2019,18(7):1436-1442
To investigate the epizootic of swine influenza virus(SIV), 60 nasal swabs were collected from a clinical cases of pig farm in Tai'an City, Shandong Province of China in April 2017. SIV was isolated by inoculating into 10-day-old Special Pathogen Free embryonated eggs and the whole genome was sequenced. An H1N1 subtype SIV was isolated and designated as A/swine/Shandong/TA04/2017(H1N1). Phylogenetic analysis showed that apart from the polymerase A(PA) fragment belonging to the 2009 pandemic H1N1 branch, seven genome segments belonged to avian-like H1N1 influenza virus lineage. The cleavage site sequence of the hemagglutinin(HA) protein was PSIQSR↓G, which is a typical molecular biological characteristic. Five potential N-glycosylation sites(N14, N26, N277, N484 and N543) were found in the HA gene. To further investigate the epidemiology of SIV in this farm, the 995 serum samples were assessed with EAH1N1 2009 pandemic H1N1 and H3 N2 antigens. The results showed that the total positive rate was 65.43%. The positive rates of single virus infection detected by EAH1N1, 2009 pdmH1N1 and H3 N2 for serum HI(Hemagglutination inhibition) were 48.35, 30.85 and 7.47%, respectively. The results showed that SIV in Shandong Province has been reassorted in some segments and the SIV-positive rate was high on the SIV outbreak farm. These data provide evidence of an epizootic of SIV. 相似文献
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采用定量分析与定性分析相结合的理论研究方式,通过景观评价要素筛选和专家打分,确定各个景观要素影响因子的初步权重,并运用网络层次分析法(ANP)分析汉回村作为长沙唯一的少数民族村落景观的合理性,揭示汉回村景观特色主导元素,同时对少数民族与汉族的融合地区乡村景观进行评价,旨在为乡村景观评价提供参考。研究结果表明汉回村乡村景观优势类型:民俗文化景观>自然生态景观>农业产业景观>建筑聚落景观,应保持与发展民俗文化景观优势,改善建筑聚落景观劣势。 相似文献
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种子在自然贮藏过程中常常伴随着内部生理机能的恶化,线粒体作为种子内活性氧(reactive oxide species,ROS)产生的主要位点是最先遭到破坏的细胞器。为探讨不同贮藏年限对老芒麦种胚线粒体抗氧化功能的影响,本试验以室温贮藏0~4年的老芒麦种子为材料,分析比较其老化规律及种胚线粒体抗氧化特性的变化规律。结果表明:随着贮藏年限的延长,老芒麦种子发芽势、发芽率和种苗鲜重逐渐下降,死种子逐渐增多,种胚线粒体苹果酸脱氢酶(mitochondria malate dehydrogenase,MDH)、谷胱甘肽还原酶(glutathione reductase,GR)、单脱氢抗坏血酸还原酶(monodehydroascorbate reductase,MDHAR)活性逐渐下降,但在死种子中超氧化物歧化酶(superoxide dismutase,SOD)活性显著升高。此外,在贮藏过程中老芒麦种胚线粒体O2·-产生速率不断上升,而H2O2含量则呈现逐渐降低的趋势,表明线粒体中O2·-的积累与细胞氧化损伤密切相关。 相似文献