Virtual trees and light capture: a method for optimizing agroforestry stand design   总被引：1，自引：1，他引：0  

Céline Leroy  Sylvie Sabatier  Novi Sari Wahyuni  Jean-François Barczi  Jean Dauzat  Marilyne Laurans  Daniel Auclair 《Agroforestry Systems》2009,77(1):37-47

In agroforestry systems, the distribution of light transmitted under tree canopies can be a limiting factor for the development of intercrops. The light available for intercrops depends on the quantity of light intercepted by tree canopies and, consequently, on the architecture of the tree species present. The influence of tree architecture on light transmission was analysed using dynamic 3D architectural models. The architectural analysis of Acacia mangium and Tectona grandis was performed in Indonesian agroforestry systems with trees aged from 1 to 3 years. 3D virtual trees were then generated with the AmapSim simulation software and 3D virtual experiments in which tree age, planting density, planting pattern and pruning intensity varied were reconstructed in order to simulate light available for the crop. Canopy closure of trees was more rapid in A. mangium than in T. grandis agroforestry systems; after 3 years the quantity of light available for A. mangium intercrops was three times lower than under T. grandis. Simulations with A. mangium showed that practices such as pruning and widening tree spacing enable to increase the total transmitted light within the stand. On T. grandis, modification of the tree row azimuth resulted in changes in the spatial and seasonal distribution of light available for the intercrops. These results are discussed in terms of agroforestry system management.

Sylvie SabatierEmail:

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Detection of Ralstonia solanacearum (biovar 2A) in stems of symptomless plants before harvest of the potato crop using post-enrichment DAS-ELISA     

S. Priou  L. Gutarra  P. Aley  F. De Mendiburu  R. Llique 《Plant pathology》2010,59(1):59-67

The detection of Ralstonia solanacearum (biovar 2A) in stems of symptomless plants before harvest of the potato crop, instead of tubers, would not only save highly valued planting material but would be less time-consuming and would also enhance farmers' market decisions. Although pathogen detection in stems has been proven efficient for ring rot, this has never been investigated for bacterial wilt (BW). Therefore the possibility of detecting BW latent infection in stem pieces about three weeks before harvest was assessed in 57 fields of the Andean highlands of Peru. Two sensitive, specific and user-friendly serological methods were used to detect the pathogen in latently infected tubers and stems: double-antibody sandwich (DAS)-ELISA and indirect ELISA on nitrocellulose membrane (NCM) after enrichment of the plant extracts in a semi-specific broth. Optimum sample sizes of stems and tubers were evaluated for 37 potato crops showing between 0 and 0·1% BW incidence using a binomial distribution model to calculate the detection probabilities. Although results of detection using the two serological techniques had 100% concordance, detection probabilities were higher using DAS-ELISA, whatever the plant part tested. BW detection probabilities were higher for tubers than for stems; a 99% detection probability was obtained by analysing 400 stems sections or 250 tubers using DAS-ELISA. Detection of BW infection in symptomless plants 20 days before harvest using post-enrichment DAS-ELISA is a reliable and user-friendly technique that can easily be used by national plant protection services and seed programmes in developing countries.  相似文献   

Pomological and Nutraceutical Properties in Apricot Fruit: Cultivation Systems and Cold Storage Fruit Management     

Annamaria Leccese  Sylvie Bureau  Maryse Reich  M. G. C. Catherine Renard  Jean-Marc Audergon  Carmelo Mennone  Susanna Bartolini  Raffaella Viti 《Plant foods for human nutrition (Dordrecht, Netherlands)》2010,65(2):112-120

We have investigated the effect of cultivation systems and fruit post-harvest management on the antioxidant properties of apricot fruits. Trees of five cultivars ‘Tyrinthos’, ‘Cafona’, ‘Bella d’Italia’, ‘Vitillo’ and ‘Pellecchiella’ were cultivated under integrated and organic systems. Fruits were collected at full maturity stage and analyzed either immediately or after storage at 4±0.5 °C and 85% of relative humidity for seven and 14 days. The main pomological traits (weight, colour, flesh firmness, total soluble sugars, titratable acidity) and antioxidant properties were analyzed. The total antioxidant capacity (TAC by TEAC method), total phenols content (TP by Folin-Ciocalteu method) and carotenoid content by HPLC-DAD were monitored. Cultivar characterization by principal component analysis (PCA) indicated a large variability on pomological and antioxidant properties of apricot fruits. ‘Bella d’Italia’ showed better TAC and TP values compared to the other cultivars. ANOVA interactions between cultivar and cultivation system (organic/integrated) were found for the antioxidant properties. These interactions may help to select a set of genotypes with better performances under organic system, which in our study might be indicated in ‘Cafona’ and ‘Bella d’Italia’.  相似文献   

Behavioural responses to visual environment in early stage Atlantic cod Gadus morhua L. larvae          下载免费PDF全文

Ove Nicolaisen  Sylvie Bolla 《Aquaculture Research》2016,47(1):189-198

Marine fish larvae exhibit species‐specific sensitivity to light, which changes during ontogeny. Our aim was to explore how visual environment, characterized by light intensity, microalgae addition and wall colour, affects spatial distribution of Atlantic cod larvae. We applied two different small‐scale factorial designs, each of them as a series of independent short‐term trials at fixed larval ages from 5 to 35 days post hatch (DPH). Positive phototaxis increased in larvae from 5 to ≈24 DPH, followed by reduced response at later ages. Effects from the experimental factors on larval behaviour changed with age, and significant interactions between factors were present. Algae significantly affected larvae only at 5 DPH, increasing phototactic response. White wall colour induced distribution of larvae close to the tank walls at all ages. The experimental approach demonstrated clear effects from visual environment on larval distribution, and revealed both relative importance of individual factors, interactive effects and temporal changes due to larval ontogeny. Our results suggest that by fine‐tuning the visual environment in tanks, the larval distribution may be managed to improve overall rearing conditions through a more even distribution with reduced closeness to tank walls.  相似文献   

Interpreting realized pollen flow in terms of pollinator travel paths and land-use resistance in heterogeneous landscapes     

Tonya A. Lander  Etienne K. Klein  Solenn Stoeckel  Stéphanie Mariette  Brigitte Musch  Sylvie Oddou-Muratorio 《Landscape Ecology》2013,28(9):1769-1783

Widespread ecosystem change has led to declines in species world-wide. The loss of pollinators in particular constitutes a problem for ecosystem function and crop production. Understanding how landscape change affects pollinator movement, effective pollen flow, and plant and pollinator survival is therefore a global priority. In this study we investigated patterns of effective pollen flow, using wild cherry tree (Prunus avium) progeny arrays, to address two questions in three case studies: Do land-use types present different resistances to pollinator movement? Which pollinator travel path best explains the pollination data (straight lines, weighted straight lines, least cost paths or pair-wise resistance)? Trees and progeny arrays were genotyped and effective pollen flow and pollinator movement were estimated using the spatially explicit mating model. We found that pollinators did modify their travel paths in response to land-use type and arrangement, but the travel path that best described pollinator movement and the resistance rank of the land uses depended on the type and size of land-use patches and the landscape context. We propose a novel theoretical framework rooted in behavioural ecology, the resource model, for interpreting pollinator behaviour in heterogeneous landscapes. We conclude by discussing the importance and practicality of conservation and management strategies in which native and non-native land-use types together provide functional habitat and support ecosystem services across economic landscapes.  相似文献   

In situ imaging highlights local structural changes during heating: the case of meat     

Bouhrara M  Clerjon S  Damez JL  Kondjoyan A  Bonny JM 《Journal of agricultural and food chemistry》2012,60(18):4678-4687

Understanding and monitoring deformation and water content changes in meat during cooking is of prime importance. We show the possibilities offered by nuclear magnetic resonance imaging (MRI) for the in situ dynamic measurement of deformation fields and water content mapping during beef heating from 20 to 75 °C. MRIs were acquired during heating, and image registration was used to calculate the deformation field. The temperature distribution in the sample was simulated numerically to link structural modifications and water transfer to temperature values. During heating, proton density decreases because of a magnetic susceptibility drop with temperature and water expulsion due to muscle contraction. A positive relationship was found between local cumulative deformation and water content. This new approach makes it possible to identify the deformation field and water transfer simultaneously and to trace thermal history to build heuristic models linking these parameters.  相似文献   

Leak syndrome of potato in Tunisia caused byPythium aphanidermatum andPythium ultimum     

M. A. Triki  Sylvie Priou  M. El Mahjoub  A. Baudry 《Potato Research》2001,44(3):221-231

Summary TwoPythium spp. were isolated from diseased tubers exhibiting rots at harvest, in summer stores and also in refrigerated storage. Symptoms shared features described for both pink rot caused byPhytophthora erythroseptica and leak caused byPythium spp. The causal agents were identified asPythium aphanidermatum andP. ultimum by morphological and physiological observations and by fingerprinting using oomycete specific primers to amplify the internal transcribed spacer (ITS1) within ribosomal DNAs. The optimum temperatures for infection were 30°C forP. aphanidermatum and 25°C forP. ultimum, corresponding to the optimum temperatures for growth in vitro. The optimum concentration for infection of tubers inoculated by dipping in a suspension of oospores or hyphal swellings after wounding was found to be 10³ reproductive organs/ml, whereas the infection threshold was 10 reproductive organs/ml.  相似文献   

Effects of soil solarization on soil-borne populations ofPythium aphanidermatum andFusarium solani and on the potato crop in Tunisia     

M. A. Triki  Sylvie Priou  M. El Mahjoub 《Potato Research》2001,44(3):271-279

Summary Soil solarization by mulching with polyethylene for 60 days during summer in Tunisia, was effective in reducing dramatically to a depth of 30 cm inoculum levels ofFusarium solani (Fs) from 3,000 to 450 propagules gram⁻¹ of dry soil. Population densities ofPythium aphanidermatum (Pa) were reduced from 1,700 and 3,000 to 0.5 and 1 propagule gram⁻¹ of dry soil in the top 15 cm and at 1–30 cm depth, respectively. After a subsequent autumn potato crop, populations ofPa remained very low in the previously solarized soil whereas propagule density in non-solarized soils was similar to the initial density. Also, inoculum level ofFs increased by 40% in nonsolarized soils while it remained unchanged in solarized soils, suggesting microbial processes that prevented soil reinfestation. All the annual weeds were eradicated by solar heating but not the perennial weedConvolvulus arvensis. Potato plant growth and yields were improved in solarized plots.  相似文献   

Ostreid herpesvirus 1 detection and relationship with Crassostrea gigas spat mortality in France between 1998 and 2006   总被引：1，自引：0，他引：1  

Garcia C  Thébault A  Dégremont L  Arzul I  Miossec L  Robert M  Chollet B  François C  Joly JP  Ferrand S  Kerdudou N  Renault T 《Veterinary research》2011,42(1):73

ABSTRACT: Since its molecular characterisation, Ostreid herpesvirus 1 (OsHV-1) has been regularly detected in Crassostrea gigas in France. Although its pathogenicity was demonstrated on larval stages, its involvement during mortality outbreaks at the juvenile stage was highly suspected but not evidenced. To investigate mortality outbreaks, the French National Network for Surveillance and Monitoring of Mollusc Health (REPAMO) carried out two surveys in juvenile C. gigas. The first survey lasted from 1998 to 2006 and was an epidemiological inquiry occurring when oyster farmers reported mortality outbreaks. The second survey, a longitudinal one, was set up in 1998 to complete the network observations on OsHV-1. Data analysis showed a specific pattern of mortality outbreaks associated with OsHV-1 detection. Ostreid herpesvirus 1 detection mainly appeared during the summer, suggesting the influence of the seawater temperature on its occurrence. It mostly presented a patchy distribution in the field in contrast to the nursery. Significant relationship between OsHV-1 detection and spat mortality was found, preferentially in sheltered and closed environments. The longitudinal survey confirmed most of the network observations. Although subsequent works particularly epidemiological surveys would be useful to confirm the causal link between the detection of OsHV-1 and the mortality outbreaks in juvenile C. gigas, the role of OsHV-1 in oyster mortality is progressing.  相似文献   

Can the protozoan parasite Bonamia ostreae infect larvae of flat oysters Ostrea edulis?   总被引：1，自引：0，他引：1  

Arzul I  Langlade A  Chollet B  Robert M  Ferrand S  Omnes E  Lerond S  Couraleau Y  Joly JP  François C  Garcia C 《Veterinary parasitology》2011,179(1-3):69-76

Bonamia ostreae is an intracellular protistan parasite affecting flat oysters Ostrea edulis. It can be detected in juveniles but mortalities mainly affect oysters which are more than 2 years old. The parasite is usually observed inside haemocytes and sometimes free, notably in gill epithelia suggesting a parasite release through this organ. However, the infective form and ways of entry and release remain undetermined. Flat oysters incubate their larvae in their pallial cavity for 8-10 days before releasing them into the water column. Flat oysters in Bay of Quiberon in South Brittany (France) are known to be infected with B. ostreae since 1979 and is the most important area in France for O. edulis spat collection. Flat oysters incubating larvae were sampled in this area during summertime between 2007 and 2009. Both adults and larvae were preserved and assayed by PCR and in situ hybridisation (ISH). PCR tests revealed the presence of parasite DNA in some adults and larvae. Specific labelling could be detected by ISH in gills, digestive system, gonad and mantle in adults and in the epithelium surrounding the visceral cavity of some larvae. Our results demonstrate that larvae can be infected with B. ostreae. Larvae might thus contribute to the spread of the parasite during their planktonic life. In addition, their transfer for aquaculture purpose should be controlled especially when they are exported from infected zones.  相似文献