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101.
Aye Nyein Chan Shutu Xu YaQin Shi YaNan Li Ali Farhan DongWei Guo JiQuan Xue 《Euphytica》2017,213(1):12
Association mapping was conducted to explore favorable alleles of the chlorophyll-related non-yellow coloring 1 (NYC1) gene under light and dark using an association panel of 146 maize inbred lines. A total of 14 polymorphic sites were identified to be significantly associated with at least one of the chlorophyll-related traits at the seedling stage. Four single nucleotide polymorphisms (SNPs) (S320, S2951, S3901, and S3355) from the NYC1 gene were respectively strongly associated with chlorophyll b (chlb), the ratio of chlorophyll a to chlorophyll b (chl_ratio), chlorophyll a degradation (chla_deg), and total chlorophyll degradation (total_chl_deg). SNPs S320 (C/A) in exon 1, and S2951 (A/G) in intron 8 was related to chlb, with 6.01 and 8.89% of phenotypic variation under light treatment, respectively. Under dark treatment, SNP S3901 (C/T), located in 3′ untranslated region (3′UTR), was associated with chl_ratio, explaining 7.01% of the observed phenotypic variation, whereas SNP S3355 (C/G) in intron 9 explained 6.48 and 5.18% of phenotypic variations in chla_deg and total_chl_deg, respectively. Taken together, these results indicated that the NYC1 gene plays an important role in chlorophyll content and other related traits, and different sites act on chlorophyll metabolism under different light intensities in maize seedlings. Furthermore, these findings improve our understanding of the genetic basis of chlorophyll metabolism under different light conditions. 相似文献
102.
Pablo F. Roncallo Pavan C. Akkiraju Gerardo L. Cervigni Viviana C. Echenique 《Euphytica》2017,213(12):277
A quantitative trait loci (QTL) analysis of grain yield and yield-related traits was performed on 93 durum wheat recombinant inbred lines derived from the cross UC1113 × Kofa. The mapping population and parental lines were analyzed considering 19 traits assessed in different Argentine environments, namely grain yield, heading date, flowering time, plant height, biomass per plant, and spikelet number per ear, among others. A total of 224 QTL with logarithm of odds ratio (LOD) ≥ 3 and 47 additional QTL with LOD > 2.0 were detected. These QTL were clustered in 35 regions with overlapping QTL, and 12 genomic regions were associated with only one phenotypic trait. The regions with the highest number of multi-trait and stable QTL were 3BS.1, 3BS.2, 2BS.1, 1BL.1, 3AL.1, 1AS, and 4AL.3. The effects of epistatic QTL and QTL × environment interactions were also analyzed. QTL putatively located at major gene loci (Rht, Vrn, Eps, and Ppd) as well as additional major/minor QTL involved in the complex genetic basis of yield-related traits expressed in Argentine environments were identified. Interestingly, the 3AL.1 region was found to increase yield without altering grain quality or crop phenology. 相似文献
103.
Zhang Yu Wen Liuying Yang Aiguo Luo Chenggang Cheng Lirui Jiang Caihong Chang Aixia Li Wei Zhang Jing Xiao Zhixin Wang Yuanying 《Euphytica》2017,213(11):259
Tobacco mosaic virus (TMV) caused serious loss in yield and quality of tobacco every year. It is a long-term goal to improve the tobacco resistance against TMV by tobacco breeding. N gene was the firstly reported TMV-resistant gene, which showed resistance against all Tobamoviruses except the Ob stain and belonged to the toll-interleukin-1 receptor/nucleotide-binding site/leucine-rich repeat class of plant resistance (R) genes. At present, N gene had already been widely used in tobacco conventional breeding, but there is rare available molecular maker used in marker-assisted selection of TMV resistance. In this study, we designed a pair of primers that specific amplify N gene fragment based on the sequence of N gene intron III, named N-marker. Then, we identified TMV resistance by two selecting methods, PCR with N-marker and inoculated with the TMV-C strain. Results from the two method showed that (1) 13 varieties among 67 tobacco varieties displayed hypersensitive reaction when inoculated with the TMV-C strain, also contained N gene fragments screened by PCR with N-marker; (2) 105 strains of 200 BC1 strains showed resistance against TMV when inoculated with TMV-C strain, meanwhile, 103 of the 105 strains contained N gene fragment verified by PCR with N-marker. Therefore, the N-marker is reliable for high throughput screening of germplasm resources and tobacco breeding materials in selection of N-mediated TMV resistance. Our study not only developed a molecular marker for tobacco breeding, but also identified new germplasm resources that are resistant to TMV. 相似文献
104.
Soil and root samples were collected from major tomato growing areas of Ethiopia during the 2012/2013 growing season to identify root-knot nematode problems. DNA-based and isozyme techniques revealed that Meloidogyne incognita and M. javanica were the predominant Meloidogyne species across the sampled areas. The aggressiveness of different populations of these species was assessed on tomato cultivars Marmande and Moneymaker. The two most aggressive populations of each species were selected and further tested on 33 tomato genotypes. The resistance screening and mechanism of resistance was performed after inoculation with 100 freshly hatched (<24 h) second-stage juveniles (J2). Eight weeks after inoculation the number of egg masses produced on each cultivar was assessed. For the resistance mechanism study, J2 penetration and their subsequent development inside the tomato roots were examined at 1, 2, 4 and 6 weeks after inoculation. On both cultivars Marmande and Moneymaker all M. incognita and M. javanica populations formed a high number of egg masses indicating highly aggressive behaviour. Populations from ‘Jittu’ and ‘Babile’ for M. incognita and ‘Jittu’ and ‘Koka’ for M. javanica were selected as most aggressive. None of the 33 tomato genotypes were immune for these M. incognita and M. javanica populations. However, several tomato genotypes were found to have a significant effect on the number of egg masses produced indicating possible resistance. For M. javanica populations there were more plants from cultivars or breeding lines on which no egg masses were found compared to M. incognita populations. The lowest number of egg masses for both populations of M. incognita was produced on cultivars Bridget40, Galilea, and Irma while for M. javanica it was on Assila, Eden, Galilea, Tisey, CLN-2366A, CLN-2366B and CLN-2366C. Tomato genotypes, time (weeks after inoculation) and their interaction were significant sources of variation for J2 penetration and their subsequent development inside the tomato roots. Differential penetration was found in breeding lines such as CLN-2366A, CLN-2366B and CLN-2366C, but many of the selected tomato genotypes resistance for the tested M. incognita and M. javanica populations were expressed by delayed nematode development. Therefore, developing a simple screening technique to be used by local farmers or extension workers is crucial to facilitate selection of a suitable cultivar. 相似文献
105.
Gil Luypaert Johan Witters Johan Van Huylenbroeck Patrick De Clercq Jan De Riek Ellen De Keyser 《Euphytica》2017,213(10):227
A set of putative marker genes to study plant defense responses against Polyphagotarsonemus latus, a key pest in the production of Rhododendron simsii hybrids, was selected and validated. Genes belonged to the biosynthetic pathway of phytohormones jasmonic acid (JA) (RsLOX, RsAOS, RsAOC, RsOPR3 and RsJMT) and salicylic acid (SA) (RsPAL and RsICS). Furthermore, RsPPO, a putative marker gene for oxidative stress response was successfully cloned from R. simsii. A CTAB-based extraction protocol was optimized to assure excellent RNA quality for subsequent RT-qPCR analysis. The RT-qPCR protocol was extensively tested and RsRG7 and RsRG14 were selected as reference genes from a geNorm pilot study. Validation of the marker genes was done after application with elicitors [methyl jasmonate (MeJA), coronatine, β-aminobutyric acid and acibenzolar-Smethyl] or wounding. Both 100 μM MeJA and 0.1 μM coronatine had a significant effect on the expression of all marker genes. Foliar application of MeJA on the shoots resulted in a significantly earlier response when compared to root application and subsequent sampling of the shoots. Expression patterns after MeJA treatment were generally the same in six R. simsii genotypes: ‘Nordlicht’, ‘Elien’, ‘Aiko Pink’, ‘Michelle Marie’, ‘Mevrouw Gerard Kint’ and ‘Sachsenstern’. Wounding resulted in the same expression patterns as MeJA treatment except for RsJMT. None of the genotypes showed a significant induction of the latter gene 6 h upon wounding. Findings of these experiments indicated that the tolerant genotype ‘Elien’ has low basal expression levels of RsPPO. This might be the first step towards the breeding of mite-tolerant genotypes. 相似文献
106.
107.
白酒糟与菊芋渣混合青贮发酵品质及微生物菌群多样性 总被引:2,自引:2,他引:0
利用青贮原理将白酒糟和菊芋渣混合进行固态发酵,二者按照不同鲜质量比发酵10、30、60 d时,分别考察营养成分、木质纤维含量和发酵特性的动态变化,并通过高通量测序技术解析发酵微生物菌群多样性。结果表明,当白酒糟和菊芋渣以1.2:1和1:1.5比例发酵时,可溶性碳水化合物含量显著高于其他处理组(P0.05),中性洗涤纤维、酸性洗涤纤维和木质素含量均显著低于其他处理组(P0.05),相对饲用价值和生物降解潜力较高。发酵过程中pH值、乳酸和氨氮含量等特性参数均处于优良青贮品质范围,V-score评分均为优等。白酒糟或菊芋渣单独发酵期间主要以变形菌和厚壁菌门细菌为主,混合发酵时则演变为以厚壁菌门、乳杆菌属细菌为主。总之,白酒糟与菊芋渣能通过生化互补特性发挥协同效应实现优质青贮,综合考虑糟渣生物质资源的利用价值和处理效率等因素,实际生产中建议以1.2:1比例混合青贮发酵30 d为宜,可获得良好发酵品质。 相似文献
108.
高山树线交错带是高海拔地带对环境变化最为敏感的生态系统之一,土壤有机碳库及其稳定性在生态系统变化中具有显著指示作用。通过物理-化学方法对土壤不同活性有机碳进行连续分级分离,研究土壤有机碳不同组分在海拔环境梯度下分布特征及稳定性。结果表明,高山树线交错带土壤有机碳主要集中在物理分级组分(≥0.02 mm),且粒径越大有机碳含量越高,即主要以颗粒态有机碳形式存在,占比均高于98%;在<0.02 mm有机-无机复合体中有机碳采用化学分级分离,这部分有机碳占比低于土壤总有机碳2%,且主要以腐殖质(胡敏素)形式存在(占土壤总有机碳0.6%~0.8%),腐殖质占有机碳比例远低于一般土壤;随着海拔升高,土壤有机碳总量上升,颗粒态有机碳(物理分级组分)比例升高,胡敏素类腐殖质比例下降。因此,川西高海拔树线交错带的高寒土壤有机碳,主要以不稳定有机碳(POC)形式存在,随着温度上升(海拔降低)将导致土壤矿质化和腐殖化加剧,有机碳总量下降,土壤不稳定性组分(物理分级组分)降低,土壤稳定性(腐殖化比例)上升。 相似文献
109.
Monica L. Bond Curtis M. Bradley Christian Kiffner Thomas A. Morrison Derek E. Lee 《Landscape Ecology》2017,32(8):1705-1721
Context
Managers are faced with numerous methods for delineating wildlife movement corridors, and often must make decisions with limited data. Delineated corridors should be robust to different data and models.Objectives
We present a multi-method approach for delineating and validating wildlife corridors using multiple data sources, which can be used conserve landscape connectivity. We used this approach to delineate and validate migration corridors for wildebeest (Connochaetes taurinus) in the Tarangire Ecosystem of northern Tanzania.Methods
We used two types of locational data (distance sampling detections and GPS collar locations), and three modeling methods (negative binomial regression, logistic regression, and Maxent), to generate resource selection functions (RSFs) and define resistance surfaces. We compared two corridor detection algorithms (cost-distance and circuit theory), to delineate corridors. We validated corridors by comparing random and wildebeest locations that fell within corridors, and cross-validated by data type.Results
Both data types produced similar RSFs. Wildebeest consistently selected migration habitat in flatter terrain farther from human settlements. Validation indicated three of the combinations of data type, modeling, and corridor detection algorithms (detection data with Maxent modeling, GPS collar data with logistic regression modeling, and GPS collar data with Maxent modeling, all using cost-distance) far outperformed the other seven. We merged the predictive corridors from these three data-method combinations to reveal habitat with highest probability of use.Conclusions
The use of multiple methods ensures that planning is able to prioritize conservation of migration corridors based on all available information.110.
Maria Garcia-Martin Nora Fagerholm Claudia Bieling Dimitris Gounaridis Thanasis Kizos Anu Printsmann Matthias Müller Juraj Lieskovský Tobias Plieninger 《Landscape Ecology》2017,32(11):2133-2150