Lineage specific antigenic differences in porcine torovirus hemagglutinin-esterase (PToV-HE) protein     

Jaime Pignatelli  Julio Alonso-Padilla  Dolores Rodríguez 《Veterinary research》2013,44(1):126

Hemagglutinin-esterases (HE) are viral envelope proteins present in some members from the toro-, corona- and orthomyxovirus families, all related with enteric and/or respiratory tract infections. HE proteins mediate reversible binding to sialic acid receptor determinants, very abundant glycan residues in the enteric and respiratory tracts. The role of the HE protein during the torovirus infection cycle remains unknown, although it is believed to be important in the natural infection process. The phylogenetic analysis of HE coding sequences from porcine torovirus (PToV) field strains revealed the existence of two distinct HE lineages. In a previous study, PToV virus strains with HE proteins from the two lineages were found coexisting in a pig herd, and they were even obtained from the same animal at two consecutive sampling time points. In this work, we report antigenic differences between the two HE lineages, and discuss the possible implications that the coexistence of viruses belonging to both lineages might have on the spread and sustainment of PToV infection in the farms.  相似文献   

Influence of pH, iron source, and Fe/ligand ratio on iron speciation in lignosulfonate complexes studied using Mössbauer spectroscopy. Implications on their fertilizer properties     

Carrasco J  Kovács K  Czech V  Fodor F  Lucena JJ  Vértes A  Hernández-Apaolaza L 《Journal of agricultural and food chemistry》2012,60(13):3331-3340

Iron chlorosis is a very common nutritional disorder in plants that can be treated using iron fertilizers. Synthetic chelates have been used to correct this problem, but nowadays environmental concerns have enforced the search for new, more environmentally friendly ligands, such as lignosulfonates. In this paper, Fe coordination environment and speciation in lignosulfonate (LS) complexes prepared under different experimental conditions were studied by (57)Fe M?ssbauer spectroscopy in relation to the Fe-complexing capacities, chemical characteristics of the different products, and efficiency to provide iron in agronomic conditions. It has been observed that the complex formation between iron and lignosulfonates involves different coordination sites. When Fe(2+) is used to prepare the iron-LS product, complexes form weak adducts and are sensitive to oxidation, especially at neutral or alkaline pH. However, when Fe(3+) is used to form the complexes, both Fe(2+) and Fe(3+) are found. Reductive sugars, normally present in lignosulfonates, favor a relatively high content of Fe(2+) even in those complexes prepared using Fe(3+). The formation of amorphous ferrihydrite is also possible. With respect to the agronomical relevance of the Fe(2+)/Fe(3+) speciation provided by the M?ssbauer spectra, it seems that the strong Fe(3+)-LS complexes are preferred when they are applied to the leaf, whereas root uptake in hydroponics could be more related with the presence of weak bonding sites.  相似文献   

Testing a novel spatially-explicit dynamic modelling approach in the scope of the laurel forest management for the endangered Azores bullfinch (Pyrrhula murina) conservation     

Rita Bastos  Mário Santos  Jaime Albino Ramos  Joana Vicente  Carlos Guerra  Joaquim Alonso  João Honrado  Ricardo Santos Ceia  Sérgio Timóteo  João Alexandre Cabral 《Biological conservation》2012,147(1):243-254

The Azores bullfinch (Pyrrhula murina) is an endemic bird of São Miguel island (Azores Archipelago, Portugal), currently threatened by two of the major causes of biodiversity loss worldwide: invasion of native habitats by exotic plants and habitat destruction by land use changes. The aim of this research was to develop and test a novel spatially explicit modelling framework that predicts the Azores bullfinch responses to alternative realistic scenarios of native forest management. This was done by integrating Multi-Model Inference statistical analysis, Stochastic-Dynamic Modelling and Geographic Information Systems under a common framework relating bird population trends to changes in the surrounding habitats. Overall, in the next 25 years, the Azores bullfinch breeding population was predicted to increase around 19% as a consequence of habitat management actions already implemented (“LIFE Priolo” project) or around 27% in the context of realistic future habitat restoration scenarios. These results represent, respectively, a supplementary increase of more 6% or more 13% in the Azores bullfinch abundance when compared with the trends simulated for the scenario without management. Nevertheless, those actions seemed to be relatively ineffective in promoting the expansion of the species from the actual restricted favourable area, essentially due to local forestry dynamics and on-going plant invasion processes. This novel integrative approach provides a promising baseline to support ecological models with increased realism and predictive power, making the outputs more useful and intuitive to decision-makers and environmental managers.  相似文献   

Swedish coffee (Astragalus boeticus L.), a neglected coffee substitute with a past and a potential future     

Jaime Prohens  Isabel Andújar  Santiago Vilanova  Mariola Plazas  Pietro Gramazio  Rafael Prohens  Francisco J. Herraiz  Antonio M. De Ron 《Genetic Resources and Crop Evolution》2014,61(1):287-297

Swedish coffee (Astragalus boeticus) seeds have been used as a coffee substitute, in particular during the nineteenth century and in times of scarcity. A. boeticus is found in the wild in a wide range of environments in the Mediterranean and Middle Eastern regions and is able to grow in areas with low and irregular rainfall. It is well-adapted to cultivated and disturbed environments, has indehiscent pods and high yield potential, and is therefore pre-adapted to cultivation and domestication. Swedish coffee is an annual that flowers in spring and produces small (3–6 mm × 3–5 mm) kidney-shaped seeds that can be harvested in summer. The genetic diversity of the species has not been studied, but evidence (wide range of environments, insect pollination) suggests that considerable diversity exists in the species. The genetic resources of Swedish coffee conserved in germplasm banks are very limited, with only 49 accessions conserved in six genebanks. Although no cultivated varieties exist at present and no breeding studies are underway, evidence suggests that limited breeding could result in considerable genetic advances. The cultivation of A. boeticus was very important during the nineteenth century in several countries of Europe, in particular in Sweden, where the cultivation was promoted as a coffee substitute by the monarchy. Several reports exist on its cultivation in several countries of Northern, Central and Southern Europe during the nineteenth century and beginning of the twentieth century. However, its cultivation gradually lost importance and was eventually abandoned. Swedish coffee can be grown in different types of soils as a regular winter or spring legume crop, and thanks to symbiosis with rhizobia may be able to perform well with reduced N fertilization. Several historical accounts report an excellent quality of the coffee substitute prepared with roasted Swedish coffee seeds. However, no investigations have been carried out to study the process of roasting and its influence on the final quality. The information presented here indicates that limited efforts in A. boeticus breeding, cultivation, and industrial processing potentially might result in the recovery of this neglected coffee substitute.  相似文献   

Single-molecule DNA sequencing of a viral genome   总被引：4，自引：0，他引：4  

Harris TD  Buzby PR  Babcock H  Beer E  Bowers J  Braslavsky I  Causey M  Colonell J  Dimeo J  Efcavitch JW  Giladi E  Gill J  Healy J  Jarosz M  Lapen D  Moulton K  Quake SR  Steinmann K  Thayer E  Tyurina A  Ward R  Weiss H  Xie Z 《Science (New York, N.Y.)》2008,320(5872):106-109

The full promise of human genomics will be realized only when the genomes of thousands of individuals can be sequenced for comparative analysis. A reference sequence enables the use of short read length. We report an amplification-free method for determining the nucleotide sequence of more than 280,000 individual DNA molecules simultaneously. A DNA polymerase adds labeled nucleotides to surface-immobilized primer-template duplexes in stepwise fashion, and the asynchronous growth of individual DNA molecules was monitored by fluorescence imaging. Read lengths of >25 bases and equivalent phred software program quality scores approaching 30 were achieved. We used this method to sequence the M13 virus to an average depth of >150x and with 100% coverage; thus, we resequenced the M13 genome with high-sensitivity mutation detection. This demonstrates a strategy for high-throughput low-cost resequencing.  相似文献   

The Arcón method     

Jaime Parejo Garcia 《Journal of Veterinary Behavior: Clinical Applications and Research》2009,4(6):251-252

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