Genotypic analysis of virulence genes and antimicrobial profile of diarrheagenic <Emphasis Type="Italic">Escherichia coli</Emphasis> isolated from diseased lambs in Iran     

Reza Ghanbarpour  Nasrin Askari  Masoud Ghorbanpour  Yahya Tahamtan  Khoobyar Mashayekhi  Narjes Afsharipour  Nasim Darijani 《Tropical animal health and production》2017,49(3):591-597

The aim of the present study was to determine the analysis of virulence genes and antimicrobial profile of diarrheagenic Escherichia coli isolated from diseased lambs. Two hundred ninety E. coli isolates were recovered from 300 rectal swabs of diarrheic lambs and were confirmed by biochemical tests. The pathotype determination was done according to the presence of genes including f5, f41, LTI, STI, bfp, ipaH, stx ₁ , stx ₂ , eae, ehlyA, cnf ₁ , cnf ₂ , cdIII, cdIV, and f17 by PCR method. Sixty-six isolates (23.72%) possessed the STI gene and categorized into entrotoxigenic E. coli (ETEC). Nine isolates (3.1%) and five isolates (1.72%) were positive for the cnf1 and cnf2 genes which categorized into necrotoxic E. coli (NTEC). Hundred and seventeen isolates (40.34%) harbored stx ₁ and/or stx ₂ and classified as Shiga toxin-producing E. coli (STEC). Thirteen isolates (4.48%) were assigned to atypical entropathogenic E. coli (aEPEC) and possessed eae gene. Two isolates (0.68%) were positive for ipaH gene and were assigned to entroinvasive E. coli (EIEC). Statistical analysis showed a specific association between eae gene and STEC pathotype (P?<?0.0001). The most prevalent resistance was observed against lincomycin (96.5%) and the lowest resistance was against kanamycine (56.02%), respectively. The high prevalence of STEC and ETEC indicates that diarrheic lambs represent an important reservoir for humans. ETEC may play an important role for frequent occurrence of diarrhea in lambs observed in this region. Due to high antibiotic resistance, appropriate control should be implemented in veterinary medicine to curb the development of novel resistant isolates.  相似文献   

Molecular identification of a phytoplasma associated with Russian olive witches’ broom in Iran     

Mahnaz Rashidi  Youbert Ghosta  Masoud Bahar 《European journal of plant pathology / European Foundation for Plant Pathology》2010,127(2):157-159

Russian olive trees (Elaeagnus angustifolia) showing witches’ broom symptoms typical of phytoplasma infection were observed in the Urmia region of Iran. A phytoplasma named Russian olive witches’ broom phytoplasma (ROWBp-U) was detected from all symptomatic samples by amplification of the 16S rRNA gene and 16S/23S rDNA spacer region using the polymerase chain reaction (PCR) which gave a product of expected length. DNA from symptomless plants used as a negative control yielded no product. The sequence of the 16S rRNA gene and 16S/23S rDNA spacer region of ROWBp-U showed 99% similarity with the homologous genes of members of the aster yellows group. We also detected a phytoplasma in neighboring alfalfa plants (AlWBp-U) showing severe witches’ broom symptoms. An 1107 bp PCR product from the 16S rRNA gene showed 99% homology with the corresponding product in ROWBp-U, suggesting the presence of the same phytoplasma actively vectored in the area. Further observations showed that Russian olive trees with typical ROWB symptoms were present in an orchard near Tehran which is located over 530 km south-east of the original Urmia site. The corresponding sequence of this phytoplasma (ROWBp-T) showed 99% homology to that of the ROWBp-U. A sequence homology study based on the 16S rRNA gene and 16S/23S rDNA spacer region of ROWBp-U and other phytoplasmas showed that ROWBp-U is most closely related to the 16SrI group. To our knowledge, this is the first report of a phytoplasma infection in a member of the Elaeagnaceae.  相似文献   

早熟无限结荚习性大豆子粒生长特征     

刘晓冰  Gurkirat BAATH  金剑  张秋英  Masoud HASHEMI 《作物学报》2010,36(3):496-501

大豆产量潜力受到基因型和环境条件的制约。一种基因型的密度、植株分布决定其对太阳辐射、水分和养分的利用,进而高产的形成。当群体生长所需外界要素之一不能满足时,植株间形成竞争。产量的区域间及年际间差异与这种株间竞争关系密切,最终表现为单位面积内一个或多个产量构成因子的差异,如株荚数、荚粒数、或单粒重(籽粒大小)。本研究探讨籽粒大小在调节不同密度、行距条件下产量差异及年际间产量差异的作用。多点试验表明,籽粒大小在不同节位上及不同籽粒数的荚间差异不大。然而在2粒或3粒荚内,荚基部粒比中部及顶部粒小10%,而且子叶细胞体积差异不大。在改变源库、增强光照或遮阴条件下,籽粒大小发生变化。籽粒大小与子叶细胞数相关。籽粒大小是可塑的,但即使底部节位荚较顶部节位提前15~20 d鼓粒,籽粒大小在所有节位间差异不大,所以籽粒大小与子叶细胞数的关系仍值得探讨。  相似文献   

Occurrence of anti-<Emphasis Type="Italic">Toxoplasma gondii</Emphasis> antibodies in female cattle in south-west of Iran     

Hossein Hamidinejat  Masoud Ghorbanpour  Leily Nabavi  Mohammad Rahim Haji Hajikolaie  Mohammad Hossein Razi Jalali 《Tropical animal health and production》2010,42(5):899-903

Toxoplasmosis, caused by Toxoplasma gondii, is a significant disease in livestock and humans. In Iran, studies shows that T. gondii infection in humans is relatively high and prevalence is associated mainly with consumption of undercooked meat or meat products. We have examined 450 serum samples from female cattle distributed over all Ahvaz, the center of Khouzestan province, south-west of Iran. IgG antibodies to T. gondii were assayed by the modified agglutination test using whole tachyzoites of T. gondii, and found in 71 (15.77%) of 450 cattle with titers of 1:25 in 38, 1:50 in 18, 1:100 in 11, 1:200 in three and 1:400 in one. Titers of antibodies were decreased in cattle over 2 years old. These results indicate that T. gondii infection in cattle of Khouzestan is relatively considerable, but not very high and consumption of beef may be a source of infection for humans in south-west of Iran.  相似文献   

Effects of short-term oral administration of propranolol on tear secretion in clinically normal dogs     

Ghaffari MS  Arzani V  Khorami N  Rajaei SM 《The Canadian veterinary journal. La revue veterinaire canadienne》2011,52(8):875-877

This study evaluated the effects of short-term oral administration of propranolol on tear secretion in 15 clinically normal crossbreed dogs. The treatment group (n = 8) received propranolol (2 mg/kg q8h) orally for 7 days. The control group (n = 7) received placebo during the study. Schirmer I tear tests were performed on both eyes 1 d prior to drug administration (T(0)), at 1 (T(1)), 3 (T(3)), and 7 (T(7)) days of treatment. Tear production in dogs, measured by STT, was not significantly reduced in both groups.  相似文献   

Molecular genotyping and epidemiology of Mycobacterium bovis strains obtained from cattle in Iran     

Mosavari N  Feizabadi MM  Jamshidian M  Shahpouri MR  Forbes KJ  Pajoohi RA  Keshavarz R  Taheri MM  Tadayon K 《Veterinary microbiology》2011,151(1-2):148-152

Restriction fragment length polymorphism (RFLP) genotyping was employed to analyze the population genetics of Mycobacterium bovis in Iran. One hundred and twenty-three isolates collected from slaughtered tuberculosis-suspect cattle and one clinically asymptomatic buffalo were subjected to RFLP analysis with probes of the polymorphic GC-rich sequence (PGRS) and the direct repeat sequence (DR) using DNA digested with PvuII and AluI. All these methods detected a large homogeneous population in which only a few isolates had variant genotypes. Only AluI-based RFLPs of both the PGRS and DR sequences were able to clearly differentiate between BCG and field strains of M. bovis. As in previous reports, these findings seem to reflect a recent dispersal of one or a few strains in Iran following the substantial expansion of Holstein-Friesian cattle over the last few decades.  相似文献   

Digital assessments of soil organic carbon storage using digital maps provided by static and dynamic environmental covariates     

Fatemeh Rahbar Alam Shirazi  Farzin Shahbazi  Hossein Rezaei  Asim Biswas 《Soil Use and Management》2023,39(2):948-974

Understanding the vertical and lateral distribution of soil organic carbon (SOC) and soil organic carbon density (SOCD) is indispensable for soil use and environmental management because of their vital role in soil quality assessments. Primarily, they are needed in calculating soil organic carbon storage (SOCS). The objective of this research was to provide digital maps of SOC and SOCD variation as well as their uncertainties at multiple standardized depths (H1: 0–5, H2: 5–15, H3: 15–30, H4: 30–60 and H5: 60–100 cm) using a parsimonious model with optimized terrain-related attributes and satellite-derived data. SOCS were evaluated at soil subgroup levels. An area of about 808 km² with varying elevation, plant cover and lithology from the Miandoab region, West Azerbaijan Province, Iran was selected as a case study area. A total of 386 soil samples were collected from 104 profiles comprising various soil genetic horizons. A continuous spline function was then fitted to the target properties in advance of creating a dataset at five standard depth intervals (following the GlobalSoilMap project). These were then grouped into three classes including top (H1), middle (H2, H3 and H4) and bottom (H5) depths to ease interpretation. Static and dynamic covariates (30-m resolution) were derived from a digital elevation model (DEM) and a suite of Landsat-8 spectral imageries, respectively. Four candidate models including stepwise multiple linear regression (SMLR), random forest (RF), cubist (CU) and extreme gradient boosting (XGBoost) Tree were tested in this study. Finally, the digital maps at 30-m resolution of SOC and SOCD and their uncertainties were prepared using the best-fit model and the bootstrapping method, respectively. Four soil subgroups (Gypsic Haploxerepts, Typic Calcixerepts, Typic Haploxerepts and Xeric Haplocalcids) were identified across the study area. The covariates had variable contributions on the evaluated models. The XGBoost Tree model generally outperformed other models for prediction of SOC and SOCD (R² = 0.60, on average). Regardless of soil subgroups, the uncertainty analysis showed that the SOCD map had a low prediction interval range value indicating high accuracy. Additionally, the highest SOCS and SOCD was observed at the top followed by middle and bottom depths in the study area. All subgroups exhibited a decreasing trend of SOCD with increasing depth. A similar trend was also observed for SOCS. The highest SOCD (on average) was observed in Gypsic Haploxerepts (4.71 kg C/m²) followed by Typic Calcixerepts (4.46 kg C/m²), Typic Haploxerepts (4.45 kg C/m²) and Xeric Haplocalcids (4.40 kg C/m²). Overall, the SOCS normalized by area within soil order boundaries was greater in Inceptisols than Aridisols across the study area. The findings of this study provide critical information for sustainable management of soil resources in the area for agricultural production and environmental health in the Miandoab region of Iran.  相似文献   

Zinc sorption–desorption by sand,silt and clay fractions in calcareous soils of Iran     

Mahdi Najafi Ghiri  Mahrooz Rezaei  Abdolmajid Sameni 《Archives of Agronomy and Soil Science》2013,59(9):945-957

Zinc sorption–desorption by sand, silt and clay fractions of six representative calcareous soils of Iran were measured. Sand, silt and clay particles were fractionated after dispersion of soils with an ultrasonic probe. Zinc sorption analysis was performed by adding eight rates of Zn from 6 to 120 μmol g^?1. For the desorption experiment, samples retained after the measurement of Zn sorption were resuspended sequentially in 0.01 M NaNO₃ solution and shaken for 24 h. Results indicated that Zn sorption by soil fractions increased in the order clay > silt > sand, and correlated negatively with CaCO₃ content and positively with cation exchange capacity (CEC) and smectite content. Results indicated that for all fractions, the Langmuir equation described the sorption rates fairly well. In contrast to sorption, Zn desorption from soil fractions increased in the order sand > silt > clay, and correlated positively with CaCO₃ content, CEC and smectite content. Results showed that parabolic diffusion and two constant equations adequately described the reaction rates of Zn desorption. In general, for all soils studied, the coarser the particle size, the less Zn sorption and more Zn desorption, and this reflects much higher risk of Zn leaching into groundwater or plant uptake in contaminated soils.  相似文献   

Soil application of entomopathogenic nematodes suppresses the root-knot nematode Meloidogyne javanica in cucumber     

Sayedain  Fatemeh Sadat  Ahmadzadeh  Masoud  Fattah-Hosseini  Somayeh  Bode  Helge B. 《植物病害和植物保护杂志》2021,128(1):215-223

Journal of Plant Diseases and Protection - Cucumber (Cucumis sativus) cultivation in commercial greenhouses occupies an important section of vegetable production in Iran. Root-knot nematode...  相似文献   

The effect of pH and calcium on copper availability to the springtail Folsomia candida in simplified soil solutions     

Masoud M. Ardestani  Cornelis A.M. van Gestel 《Pedobiologia》2014

The effect of pH and calcium on copper bioavailability to the springtail Folsomia candida was determined by assessing uptake kinetics upon copper exposure for 15 days in simplified soil solutions. A slight bioaccumulation of copper was observed in all treatments and controls. The effect of exposure concentration and calcium level on copper accumulation was not significant. Although pH and time slightly but significantly affected copper concentrations in the body, copper uptake rates were not significantly different from zero. This suggests that copper uptake in F. candida exposed to sub-lethal copper concentrations in soil pore water is not affected by pH and calcium.  相似文献