Phylogenetic relationships of <Emphasis Type="Italic">Scomberomorus commerson</Emphasis> using sequence analysis of the mtDNA D-loop region in the Persian Gulf,Oman Sea and Arabian Sea     

Ana Mansourkiaei  Pargol Ghavam Mostafavi  Seyed Mohammad Reza Fatemi  Farhad Kaymaram  Ali Nazemi 《International Aquatic Research》2016,8(2):137-148

Narrow-barred Spanish mackerel, Scomberomorus commerson, is an epipelagic and migratory species of family Scombridae which have a significant role in terms of ecology and fishery. 100 samples were collected from the Persian Gulf, Oman Sea and Arabian Sea. Part of their dorsal fins was snipped and transferred to micro-tubes containing ethanol; then, DNAs were extracted and HRM-Real Time PCR was performed to designate representative specimens for sequencing. Phylogenetic relationships of S. commerson from Persian Gulf, Oman Sea and Arabian Sea were investigated using sequence data of mitochondrial DNA D-loop region. None clustered Neighbor Joining tree indicated the proximity amid S. commerson in four sites. As numbers demonstrated in sequence analyses of mitochondrial DNA D-Loop region a sublimely high degree of genetic similarity among S. commerson from the Persian Gulf and Oman Sea were perceived, thereafter, having one stock structure of S. commerson in four regions were proved, and this approximation can be merely justified by their migration process along the coasts of Oman Sea and Persian Gulf. Therefore, the assessment of distribution patterns of 20 haplotypes in the constructed phylogenetic tree using mtDNA D-Loop sequences ascertained that no significant clustering according to the sampling sites was concluded.  相似文献   

Characterization of Nitrogen Uptake Pattern in Malaysian Rice MR219 at Different Growth Stages Using ~(15)N Isotope     

Mu&#x  az Hashim Mohammad  Khanif Yusop Mohd  Othman Radziah  Abdul Wahid Samsuri 《水稻科学》2015,22(5):250

Nitrogen(N) use efficiency is usually less than 50%, and it remains a major problem in rice cultivation. Controlled release fertilizer(CRF) technology is one of the well-known efforts to overcome this problem. The efficiency of CRF, however, is very much dependent on the timing of nutrient release. This study was conducted to determine the precise time of N uptake by rice as a guideline to develop efficient CRF. Fertilizer N uptake by rice at different growth stages was investigated by using 15 N isotopic technique. Rice was planted in pots, with 15 N urea as N source at the rate of 120 kg/hm2. Potassium and phosphorus were applied at the same rate of 50 kg/hm2. Standard agronomic practices were employed throughout the growing periods. Rice plants were harvested every two weeks until maturation at the 14 th week and analyzed for total N and 15 N content. Nitrogen derived from fertilizer was calculated. Total N uptake in plants consistently increased until the 11 th week. After that, it started to plateau and finally declined. Moreover, N utilization by rice plants peaked at 50%, which occurred during the 11 th week after transplanting. N derived from fertilizer in rice plants were in the range of 18.7% to 40.0% in all plant tissues. The remaining N was derived from soil. Based on this study, N release from CRF should complete by the 11 th week after planting to ensure the maximum fertilizer N uptake by rice plants. Efficient CRF should contribute to higher N derived from fertilizer which also resulted in a higher total N uptake by rice plants, increasing the potential of rice to produce higher yield while at the same time of reducing loss.  相似文献   

Dietary L‐tryptophan modulates growth and immuno‐metabolic status of Labeo rohita juveniles exposed to nitrite          下载免费PDF全文

Alexander Ciji  Narottam Prasad Sahu  Asim Kumar Pal  Mohammad Shahbaz Akhtar 《Aquaculture Research》2015,46(8):2013-2024

Effect of nitrite exposure on growth and immuno‐metabolic responses of Labeo rohita fed L‐tryptophan (TRP) was studied. Fish previously fed normal and elevated levels of tryptophan for 60 days were exposed to nitrite (2.0 mg L^?1) for another 45 days with same feeding regime. There were four treatment groups, viz., TRP₀‐N (control), TRP₀+N, TRP_0.75+N (0.75% supplemental tryptophan in the diet) and TRP_1.5+N (1.5% supplemental tryptophan in the diet). Highest weight gain% and SGR were observed in control and lowest in TRP₀+N. Dietary supplementation of elevated levels of tryptophan augmented weight gain% and SGR. Nitrite exposed groups recorded higher catalase, SOD, LDH, AST and ALT activities compared with control. However, activities reduced with additional levels of tryptophan supplementation. Nitrite exposure reduced WBC count, total protein, albumin, globulin and lysozyme activity compared with unexposed group but groups which were fed additional amounts of tryptophan restored total protein, albumin and globulin similar to TRP₀‐N. In conclusion, nitrite exposure had adversely affected growth, increased activities of LDH, AST, ALT, catalase, but decreased WBC, serum protein, lysozyme and acetylcholine esterase activity of L. rohita. Normal requirement of tryptophan was unable to combat nitrite stress. However, dietary fortification with tryptophan (minimum 0.75% of diet + normal requirement) found effective in combating nitrite induced stress.  相似文献   

Spermiation time affect the milt quality indices of the Russian sturgeon,Acipenser gueldenstaedtii,Brandt & Ratzeburg, 1833          下载免费PDF全文

Mostafa Halimi  Asma Mohammadi  Rouhallah Norousta  Hossein Khara  Mohammad Reza Karimi 《Aquaculture Research》2015,46(10):2426-2430

In this study, the effects of spermiation time are investigated on milt quality of Russian sturgeon over the course of the spawning season. The milt samples were collected from three broodstock batches at three time points including: the beginning, middle and at the end of the spawning season. According to the results, the milt quality parameters including pH, sperm density, spermatocrit, duration of sperm motility and percentage of sperm motility were significantly low in the beginning and end of season than middle of season. The values of milt quality parameters in the middle of season were as follows: (motility percentage: 69.6 ± 3.5, motility duration: 460.3 ± 37.2 s, sperm density: 8.7 ± 0.4 × 10⁹, milt volume: 86.3 ± 8.1 and milt pH: 8.3 ± 0.15). Significant positive correlations were also found between milt pH and sperm motility as well as between sperm density and spermatocrit. In conclusion, our study showed that the middle of season is the best time for collection of milt with appropriate quality in Russian sturgeon. Selection of milt with good quality is necessary aim to cryopreservation of spermatozoa in endangered fish species including Russian sturgeon.  相似文献   

Age-Specific Gastric Cancer Risk Indicated by the Combination of Helicobacter pylori Sero-Status and Serum Pepsinogen Levels     

Sana Eybpoosh  Yeganeh Talebkhan  Samaneh Saberi  Maryam Esmaeili  Akbar Oghalaie  Fatemeh Ebrahimzadeh  Toktam Karimi  Afshin Abdirad  Azin Nahvijou  Mohammad Ali Mohagheghi  Mahmoud Eshagh Hosseini  Marjan Mohammadi 《Iranian Biomedical Journal》2015,19(3):133-142

Background:

Serologic screening of gastric cancer (GC) by serum pepsinogens (sPG) levels and Helicobacter pylori (Hp) sero-status, though highly informative, has provided heterogeneous results. Here, we have evaluated the modifying effects of demographic factors on the risk impact of Hp sero-status/sPG levels in gastric cancer, with particular emphasis on age.

Methods:

A cross-sectional study was carried out on 1341 individuals (GC = 578, healthy = 763), who were stratified into two age groups: 35-59 years (middle-aged, n = 830) and ≥ 60 years (60 years-plus, n = 511). Demographic factors and serological states (Hp sero-staus and sPG levels) were recorded by subject interview and serum ELISAs, respectively. Covariate-specific odds ratios were calculated by multivariable logistic regression.

Results:

Hp infection was consistently associated with increased sPGI and sPGII levels in the 60 year-plus, but not the middle-aged group. The joint examination of the variable states of the three serum biomarkers (Hp serology, sPGI, and sPGI/II ratio), in the 60 year-plus age group, demonstrated a stepwise escalation of risk from the single (sPGI_low; OR = 2.6), to double (sPGI_low/sPGI/II_low; OR = 3.55, and Hp_positive/sPGI_low; OR = 5.0) and ultimately triple (Hp_positive/PGI_low/PGI/II_low; OR = 10.48) positive states, in reference to the triple negatives. However, this pattern was not exhibited in the middle-aged subjects.

Conclusion:

Age was clearly identified as a modifying factor on the risk projection of the combined states of Hp serology and sPG levels in gastric cancer screening, reflected by the augmented (~10.5 fold) risk of GC in the triple positive (Hp_positive/sPGI_low/sPGI/II_low) 60 year-plus subjects, which was not evident in the middle-aged group. Key Words: Biomarkers, Demography, Age Distribution  相似文献   

The effect of hybridization on thermal and mechanical properties of glass/oxidized PAN fibers-polymer composites     

Hossein Ebrahimnezhad-Khaljiri  Reza Eslami-Farsani 《Fibers and Polymers》2015,16(11):2445-2450

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Water quality influences the presence of Streptococcus agalactiae in cage cultured red hybrid tilapia,Oreochromis niloticus × Oreochromis mossambicus          下载免费PDF全文

Mohammad Noor Azmai Amal  Mohd Zamri Saad  Abdullah Siti Zahrah  Abd Rashid Zulkafli 《Aquaculture Research》2015,46(2):313-323

Attempts were made to identify the association between water quality parameters and the presence of Streptococcus agalactiae in cage cultured red hybrid tilapia, Oreochromis niloticus × O. mossambicus. Fish from commercial floating net cage‐culture systems in a river and lake were randomly sampled over a 24‐month period. Swabs from the brains, eyes and kidneys were streaked directly onto blood agar to isolate S. agalactiae. Water temperature, dissolved oxygen, pH, clarity, ammonia, nitrite, sulfide, rate of water flow and depth of water at sampling sites were measured at the same time of fish sampling. The prevalence of fish that were cultured positive to S. agalactiae was significantly higher in lake compared with river. The length and weight of the infected fish were between 9 and 33 cm, and between 20 and 760 g respectively. There was a significant and positive strong correlation between the presence of S. agalactiae and fish mortalities in lake. All water quality parameters showed significant differences between river and lake. However, only water temperature, clarity and pH of lake and the ammonia, temperature and dissolved oxygen in river showed significant correlation with the presence of S. agalactiae in the cultured fish. It was concluded that several unfavourable water quality in the fish farm influencing the presence of S. agalactiae in cultured red hybrid tilapia.  相似文献   

Sublethal effects of environmentally relevant run‐off concentrations of glyphosate in the root zone of Ludwigia peploides (creeping water primrose) and Polygonum hydropiperoides (smartweed)     

Lyndsay E. Saunders  Reza Pezeshki 《Weed Biology and Management》2014,14(4):242-250

As one of the most widely applied agricultural chemicals in the world, glyphosate has many effects on the environment. The present study quantified plant responses to exposure by glyphosate through the root zone for a range of concentrations (0, 10, 100 and 1000 μg L^?1). Ludwigia peploides and Polygonum hydropiperoides were grown in a greenhouse and given a single exposure to glyphosate via the root zone. The growth and physiological parameters were measured before exposure and for 18 days postexposure. The growth variables that were measured included the relative growth rate, stem length increase, biomass and root‐to‐shoot‐ratios. The physiological variables that were measured were the chlorophyll content index and chlorophyll fluorescence. The data analyses revealed that the root‐zone glyphosate affected some of the measured variables in P. hydropiperoides more than for L. peploides. Polygonum hydropiperoides showed a significant decrease in the root‐to‐shoot ratios for the 100 μg L^?1 treatment, compared to the 10 μg L^?1 treatment. The chlorophyll content index of the treated plants was significantly reduced in P. hydropiperoides, compared to the untreated plants on Days 7 and 18. Ludwigia peploides was affected only on the day after exposure, with the chlorophyll fluorescence parameters being significantly less for the 1000 μg L^?1 treatment, compared to the 10 μg L^?1 treatment. Glyphosate‐treated P. hydropiperoides showed a decreased chlorophyll content and reduced chlorophyll fluorescence parameters. In contrast, L. peploides showed a decrease in the chlorophyll fluorescence parameters but no reduction in its chlorophyll content. In addition to demonstrating the adverse effects of root exposure to glyphosate for the study species, these data help to partially explain the highly invasive and persistent nature of L. peploides in marginal aquatic environments, such as agricultural ditches.  相似文献   

The vacuoles containing multivesicular bodies: a new observation in interaction between Ustilago esculenta and Zizania latifolia     

Jing-ze Zhang  Fu-qiang Chu  De-ping Guo  Mohammad Reza Ojaghian  Kevin D Hyde 《European journal of plant pathology / European Foundation for Plant Pathology》2014,138(1):79-91

Ustilago esculenta infects Zizania latifolia plants and induces swelling on their upper culms. As an edible aquatic vegetable, these swellings are called jiaobai (white bamboo). The process of fungal development in Huijiao (grey bamboo) plants from seedlings to upper culm swelling was investigated using knife cut tissues, light and electron microscopy. All Huijiao plants were relatively taller than all jiaobai plants and in knife-cut sections sori development differed after culm swelling in Huijiao plants. Light microscope examination show that hyphae were both intracellular and intercellular, forming hyphal aggregations, and were more abundant in nodes than in internodes. Rapid increase of hyphal aggregations occurred 15 days before culm swelling, causing the death of abundant host cells, and hyphal aggregations differentiated into sori initiates. Ultrastructural observation showed that intracellular hyphae at the interface of fungus-host interaction were encased in a sheath with outer electron-opaque and inner electron-dense layer. Scale-like material and membrane-bounded vesicles were often present in an outer electron-opaque matrix of the sheath. Vacuoles, lipid globules (LGs) and multivesicular bodies (MVBs) were occasionally seen in these fungal cells. In summer, abundant electron-dense MVBs, LGs and fewer vacuoles containing MVBs were present in a fungal cell. As the temperature decreased, some MVBs became electron-opaque, some internal vesicles were also electron-opaque, and subsequently, the MVBs disappeared, leaving irregular remnant materials in vacuoles. During the rapid increase in hyphal aggregations, the irregular remnants of material within the vacuoles disappeared and LGs were rare. At the beginning of sori development, LGs once again became abundant in the cells of hyphal aggregation. The process of sorus and teliospore development was observed systematically and relationships between each developmental stage examined from knife cut tissues, and cytological and ultrastructural sections. Sorus development occurred with the commencement of upper culm swelling and differed in the same tissues. Teliospore development was also uneven in a sorus. The inner region of a sorus developed earlier than the outer part.  相似文献   

Application of half-sib mating for genetic analysis of forage yield and related traits in Bromus inermis     

Bahram Araghi  Mohammad Barati  Mohammad Mahdi Majidi  Aghafakhr Mirlohi 《Euphytica》2014,196(1):25-34

Despite efforts made, forage yield of smooth bromegrass has increased slowly over the last 50 years of breeding. It therefore seems necessary to investigate more on the genetic basis of agro-morphological traits in this cool-season, highly drought resistant grass. The present study was aimed at estimation of total genetic variance, narrow-sense heritability, general combining ability, phenotypic and genotypic correlation among different quantitative traits in half-sib (HS) families derived from polycross of 25 smooth bromegrass genotypes that were mainly originated from Iran. Families differed significantly for all of the agro-morphological and quality traits measured. Narrow sense heritability ( ${\text{h}}_{\text{n}}^{2}$ ) ranged from about 0.2 (plant height) to 0.7 (day to inflorescence emergence and day to anthesis). Moderate to high heritability for forage dry matter yield (0.42) indicates that phenotypic selection for this trait can be successful. A wide range of general combining ability was observed for most of the studied traits, especially those related to forage yield. Relatively low genetic variation and heritability for crude protein and also negative correlation of this trait with forage yield, indicates a low probability of improving forage yield and quality simultaneously.  相似文献