A phylogenomic study of birds reveals their evolutionary history     

Hackett SJ  Kimball RT  Reddy S  Bowie RC  Braun EL  Braun MJ  Chojnowski JL  Cox WA  Han KL  Harshman J  Huddleston CJ  Marks BD  Miglia KJ  Moore WS  Sheldon FH  Steadman DW  Witt CC  Yuri T 《Science (New York, N.Y.)》2008,320(5884):1763-1768

Deep avian evolutionary relationships have been difficult to resolve as a result of a putative explosive radiation. Our study examined approximately 32 kilobases of aligned nuclear DNA sequences from 19 independent loci for 169 species, representing all major extant groups, and recovered a robust phylogeny from a genome-wide signal supported by multiple analytical methods. We documented well-supported, previously unrecognized interordinal relationships (such as a sister relationship between passerines and parrots) and corroborated previously contentious groupings (such as flamingos and grebes). Our conclusions challenge current classifications and alter our understanding of trait evolution; for example, some diurnal birds evolved from nocturnal ancestors. Our results provide a valuable resource for phylogenetic and comparative studies in birds.  相似文献   

Histopathological changes in the pancreas due to decreased pancreatic blood flow in a canine tachycardia-induced cardiomyopathy model     

Aritada YOSHIMURA  Takahiro OHMORI  Kokoro ITOU  Ryo ISHI  Yuri MATSUMURA  Yuhei WADA  Miori KISHIMOTO  Tomoko IWANAGA  Naoki MIURA  Kazuhiko SUZUKI  Ryuji FUKUSHIMA 《The Journal of veterinary medical science / the Japanese Society of Veterinary Science》2021,83(5):780

In dogs, pancreatic acinar cell injury is thought to be caused by decreased pancreatic blood flow due to heart failure. In previous our report, it demonstrated that decreased heart function causes a significant decrease in pancreatic blood flow in heart failure dog model caused by rapid ventricular pacing (RVP). However, the types of histopathological changes remain unclear. We aimed to verify the types of histopathological changes occurring in the pancreatic tissue due to decreased heart function. After RVP for 4 weeks, atrophy of pancreatic acinar cells, characterized by a decrease in zymogen granules, was observed in all areas of the pancreas. In conclusion, the result of this study suggests that attention should be paid to ischemia/hypoperfusion injury in the pancreas.  相似文献   

Distribution of the mutant allele of the DMRT3 gene associated with ambling gaits in Japanese native horse populations     

Ripon Chandra Paul  Trung Ba Nguyen  Yu Okuda  Thu Nu Anh Le  Jovilisi Mosese Dau Tabuyaqona  Yuri Konishi  Yoshi Kawamoto  Ken Nozawa  Tetsuo Kunieda 《Animal Science Journal》2020,91(1)

There are currently eight native horse populations in Japan, namely, Hokkaido, Kiso, Noma, Taishu, Misaki, Tokara, Miyako, and Yonaguni horses. Since locomotion traits, including gaitedness, are important for riding and packing horses, the genetic properties associated with these traits could be informative for understanding the characteristics and history of these horses. In this study, we investigated the distribution of the mutant allele of DMRT3 gene (DMRT3:p.Ser301Ter) associated with ambling gaits in the Japanese native horse. We also examined haplotypes of SNPs in the 83‐kb region including DMRT3 gene by genotyping four SNPs in this region. The results revealed the presence of DMRT3:p.Ser301Ter in the Hokkaido and Yonaguni populations at allele frequencies of 0.18 and 0.02, respectively, and the observed haplotype associated with DMRT3:p.Ser301Ter was estimated as the most common haplotype in the horses in the world. Since DMRT3:p.Ser301Ter has been hypothesized to spread across Eurasian continent from Medieval England after 850 to 900 CE, our findings of the presence of DMRT3:p.Ser301Ter with the common haplotype in the Japanese native horses will provide a new insight into the history of the Japanese native horse, such as considerable level of gene flow from Eurasian continent after 850 to 900 CE.  相似文献   

Quantification of lipophilic toxins associated with diarrhetic shellfish poisoning in Japanese bivalves by liquid chromatography-mass spectrometry and comparison with mouse bioassay     

Toshiyuki?SuzukiEmail author  Taketo?Jin  Yuri?Shirota  Tadashi?Mitsuya  Yutaka?Okumura  Takashi?Kamiyama 《Fisheries Science》2005,71(6):1370-1378

ABSTRACT:   Quantification of lipophilic toxins in bivalves associated with diarrhetic shellfish poisoning was investigated by liquid chromatography–mass spectrometry (LC–MS). Using a C8-silica reversed phase column and a mobile phase of aqueous acetonitrile containing 2 mM ammonium formate and 50 mM formic acid, okadaic acid, dinophysistoxin-1, 7- O -palmitoyldinophysistoxin-1, pectenotoxin-1, pectenotoxin-2, pectenotoxin-6, pectenotoxin-2 seco-acid, yessotoxin, and 45-hydroxyyessotoxin in bivalves were quantified by LC–MS in the negative mode. When the crude 90% methanol extracts were analyzed by LC–MS, there were no significant effects from bivalve matrices on the quantification of toxins. More than 200 bivalve samples collected from various production areas in Japan were analyzed by LC–MS. Pectenotoxin-6 and dinophysistoxin-1 were the dominant toxins in scallops and mussels, respectively. Yessotoxin and 45-hydroxyyessotoxin were also detected in both species. Comparison of the quantitative results obtained for these bivalve samples between LC–MS and mouse bioassay indicates that LC–MS is suitable for routine monitoring of lipophilic toxins in Japanese bivalves.  相似文献   

Comparison of horse mackerel and tilapia surimi gel based on rheological and <Superscript>1</Superscript>H NMR relaxation properties     

Moin?Uddin?Ahmad  Yuri?Tashiro  Shingo?Matsukawa  Hiroo?OgawaEmail author 《Fisheries Science》2005,71(3):655-661

ABSTRACT:   Horse mackerel and tilapia surimi were subjected to six different heat and pressure treatments in order to compare gelation characteristics of easy- and difficult-setting gels, that is, temperature dependence, by observing rheological properties and microscopic molecular mobility. The stress–relaxation and proton spin–spin relaxation time (¹H T ₂) of water were measured for all treated gels. Horse mackerel gel demonstrated higher elasticity, large distribution of the stress–relaxation process, and smaller water ¹H T ₂ than tilapia in both heat and pressure treatments. The water ¹H T ₂ was steeply increased in the pressure treatment at around 294 MPa for both fishes. In contrast, the ¹H T ₂ rarely changed in the heat treatment in spite of the considerable change in rheological properties. From the experimental results, it is considered that the gelation of horse mackerel (easy setting) surimi is induced by highly unfolding and re-aggregation of protein, which contributes to the formation of a strong network structure compared with tilapia in both heat and pressure treatments, and that pressure treatments hardly improve the gel strength of tilapia (difficult setting) surimi. The water ¹H T ₂ measurement was used effectively in order to study gelation characteristics of easy- and difficult-setting fish through observing its molecular dynamics.  相似文献   

Rheological properties and structural changes in steamed and boiled abalone meat   总被引：1，自引：0，他引：1  

Xin  GAO  Yuri  TASHIRO  Hiroo  OGAWA 《Fisheries Science》2002,68(3):499-508

ABSTRACT: Changes in tissue structures, rheological properties, and water content of abalone meat were studied in relation to boiling and steaming time. The adductor muscle of abalone Haliotis discus, which was removed directly from the shell, was boiled or steamed for 1 h, 2 h, and 3 h. When observed under a light microscope and by scanning electron microscopy, structural changes in the myofibrils were greatest in the boiled abalone meat compared with the steamed meat. When heating time was increased from 1 h to 3 h, the instantaneous modulus E ₀ of boiled abalone meat decreased gradually with increased heating time, whereas the E ₀ of steamed abalone meat was reduced when heated for 2 h. When heated for 1 h, the relaxation time of steamed abalone meat was much longer than that of boiled meat. There were no significant changes in the relaxation time of abalone meat among the different boiling times, but the relaxation time of steamed abalone meat was reduced gradually with increasing heating times. The study's results confirmed that the difference in rheological properties between the boiled and steamed meats was due mainly to the denaturation level of myofibrils when heated for 1 h, as well as due to the changes in water and solid content and the manner in which the inner water was exchanged after heating time was increased from 1 h to 3 h.  相似文献   

Cold pre-treatment is effective for 1-MCP efficacy in ‘Tsugaru’ apple fruit     

Miho Tatsuki  Hiroko HayamaHirohito Yoshioka  Yuri Nakamura 《Postharvest Biology and Technology》2011,62(3):282-287

1-Methylcyclopropene (1-MCP) treatment maintains apple fruit quality during storage, but its efficacy is dependent on a number of conditions. ‘Tsugaru’ apples are a major early season cultivar in Japan, but because ‘Tsugaru’ fruit produce abundant ethylene, they have a short shelf-life, and efficacy of 1-MCP is not as high with ‘Tsugaru’ as with other cultivars. To improve 1-MCP efficacy, ‘Tsugaru’ fruit were pre-cooled at −1 °C or −3 °C for 24 h before 1-MCP treatment. Ethylene production decreased with the cold treatment, resulting in better storage after 1-MCP treatment. Although ethylene production was low at the end of 24 h of the cold pre-treatment, expression of ACS1, the ethylene receptor genes ERS1, ETR1(a), ETR1b, ETR2 and ETR5, and the cell wall degradation-related gene PG1 all increased with a 24 h cold treatment. It is assumed that these elevated gene expression levels were not caused by ethylene, but more directly by cold stimulus. Thus, a short period of cold stimulus suppresses ethylene production, but induces expression of some genes. 1-MCP treatment was more effective with some initial fruit chilling.  相似文献   

Culture and climate change: Japanese cherry blossom festivals and stakeholders’ knowledge and attitudes about global climate change   总被引：1，自引：0，他引：1  

Ryo Sakurai  Susan K. Jacobson  Hiromi Kobori  Richard Primack  Kohei Oka  Naoya Komatsu  Ryo Machida 《Biological conservation》2011,(1):654-658

Most global climate change models predict serious ecological and social problems. In Japan, biologists have found climate change is affecting species and ecosystems, including the earlier flowering time of cherry trees which are an important cultural symbol in Japan. Cherry blossom festivals are also important to local economies. This study explored the perceptions of Japanese residents regarding climate change impacts on culturally significant events such as flower timing of cherry trees. We conducted interviews of stakeholders of three cherry blossom festivals, including sixteen organizers of festivals and 26 managers of festival-dependent businesses, to understand their awareness, attitudes and behaviors toward global climate change and impacts on cherry blossom festivals. Most organizers of the festival in Kakunodate were concerned about global warming and its impact on cherry blossom times while organizers of festivals in Nakano and Komoro felt it was unimportant if flower timing affected the festival schedule. Most (92%) managers of festival-dependent businesses mentioned that global warming is occurring and affecting the flower timing of cherry trees, but there were diverse perceptions of global warming impacts on their business. Managers more dependent on income from cherry blossom festivals indicated greater concern for the effects of climate change.  相似文献   

Cor triatriatum sinister with incomplete atrioventricular septal defect in a cat     

Nakao S  Tanaka R  Hamabe L  Suzuki S  Hsu HC  Fukushima R  Machida N 《Journal of Feline Medicine and Surgery》2011,13(6):463-466

An 11-month-old, 3 kg, female domestic shorthair cat was referred to evaluate cardiac structure and function. Echocardiography revealed the membrane dividing the left atrium into two chambers, a large defect in the lower part of the atrial septum, and turbulent blood flow from the distal left atrium into the right atrium. These findings suggested cor triatriatum sinister (CTS) with incomplete atrioventricular septal defect (AVSD). The cat was treated with medications for management of congestive heart failure. In the end, she died from right-sided heart failure 17 months after the initial presentation. At necropsy, a fibromuscular membrane with a round orifice in the left atrium and an ostium primum defect were confirmed, and the definitive diagnosis of CTS with incomplete AVSD was made. To our knowledge, this study presents the first case report of CTS with incomplete AVSD in a cat.  相似文献   

Responses of fruit growth,quality, and productivity to crop load in apple cv. Ultra Red Gala/MM111     

J.A. Yuri  J. González Talice  J. Verdugo  A. del Pozo 《Scientia Horticulturae》2011

The effects of three crop load densities (4, 6 and 8 fruit per cm² of the cross-section of each tree branch, BCSA) on fruit growth, yield, fruit quality and vegetative growth were studied in apples (Malus × domestica Borkh) Ultrared Gala/MM111, from the fourth leaf (2006–2007 season) to the sixth (2008–2009 season). The maximum fruit growth rate was reached between 90 and 108 days after full bloom (DAFB), with values above 2.6 g day⁻¹. Accumulated yields to the sixth leaf reached 181, 157 and 123 Mg ha⁻¹ in the high, medium and low crop loads, respectively. Mean fruit weight decreased with increasing fruit crop load but the yields of fruit weight over 194 g were similar in all crop loads; the highest crop load exceeded the lowest crop load by 18.8 and 27.5 Mg ha⁻¹ of fruit weight of more than 172 and 154 g, respectively. The yields of harvested fruit exceeding 75% with red coloring did not show major differences, while fruit classified as 50–75% with red coloring were less common in the low crop load. No major differences were found at the end of the study in vegetative growth in the different seasons, nor in plant size. The reduction in mean fruit weight and in the percentage of fruit with good coloring was compensated by the increase in yields, thus not resulting in an effective reduction in the quality of the harvested fruit. The level of plant development reached with a semi-vigorous rootstock and high fruit loads allowed obtaining high fruit yield earlier and of good quality.  相似文献