Characterization of an Alginate Lyase,FlAlyA, from Flavobacterium sp. Strain UMI-01 and Its Expression in Escherichia coli     

Akira Inoue  Kohei Takadono  Ryuji Nishiyama  Kenji Tajima  Takanori Kobayashi  Takao Ojima 《Marine drugs》2014,12(8):4693-4712

A major alginate lyase, FlAlyA, was purified from the periplasmic fraction of an alginate-assimilating bacterium, Flavobacterium sp. strain UMI-01. FlAlyA showed a single band of ~30 kDa on SDS-PAGE and exhibited the optimal temperature and pH at 55 °C and pH 7.7, respectively. Analyses for substrate preference and reaction products indicated that FlAlyA was an endolytic poly(mannuronate) lyase (EC 4.2.2.3). A gene fragment encoding the amino-acid sequence of 288 residues for FlAlyA was amplified by inverse PCR. The N-terminal region of 21 residues except for the initiation Met in the deduced sequence was predicted as the signal peptide and the following region of six residues was regarded as propeptide, while the C-terminal region of 260 residues was regarded as the polysaccharide-lyase-family-7-type catalytic domain. The entire coding region for FlAlyA was subjected to the pCold I—Escherichia coli BL21(DE3) expression system and ~eight times higher yield of recombinant FlAlyA (recFlAlyA) than that of native FlAlyA was achieved. The recFlAlyA recovered in the periplasmic fraction of E. coli had lost the signal peptide region along with the N-terminal 3 residues of propeptide region. This suggested that the signal peptide of FlAlyA could function in part in E. coli.  相似文献   

Assessment of criteria for improvement in Theileria orientalis sergenti infection tolerance     

Michiru FUKASAWA  Tadashi KIKUCHI  Shigeru KONASHI  Akira NISHIDA  Toshihiro YAMAGISHI 《Animal Science Journal》2003,74(1):67-72

We examined the relationships between calf productivity, anemia and Theileria orientalis sergenti infection from records of 109 Japanese shorthorn calves during a grazing period and we quantified the relative importance of the T. orientalis sergenti infection‐resistance criteria used. A decrease in average parasitemia (AvePara) and an increase in average packed cell volume (AvePCV) would cause a decrease in the number of drug treatments. An increase in AvePCV would decrease the number of drug treatments more efficiently than a decrease in AvePara. An increase in AvePCV would cause an increase in dairy gain, while a decrease in AvePara would cause a decrease in dairy gain. Therefore, an improvement in the capacity to control anemia development would improve T. orientalis sergenti infection resistance more efficiently than an improvement in the capacity to control parasitemia development.  相似文献   

Solute effects on the interaction between water and ethanol in aged whiskey     

Nose A  Hojo M  Suzuki M  Ueda T 《Journal of agricultural and food chemistry》2004,52(17):5359-5365

The hydrogen-bonding structure of water-ethanol in whiskey was examined on the basis of (1)H NMR chemical shifts of the OH of water and ethanol. Phenolic acids and aldehydes (gallic, vanillic, and syringic acids; vanillin and syringaldehyde) exhibited their structure-making effects regardless of the presence or absence of 0.1 or 0.2 mol dm(-3) acetic acid. The OH-proton chemical shifts were measured for 32 malt whiskey samples of a distillery, aged for 0-23 years in five different types of casks. The OH-proton chemical shift values of the whiskies shifted toward the lower field in proportion to their contents of total phenols. It can be concluded that the strength of the hydrogen bonding in aged whiskies is directly predominated by acidic and phenolic components gained in oak wood casks and not dependent on just the aging time.  相似文献   

Importance of rubberwood in wood export of Malaysia and Thailand     

Akira Shigematsu  Nobuya Mizoue  Tsuyoshi Kajisa  Shigejiro Yoshida 《New Forests》2011,41(2):179-189

We examined the contribution of rubberwood to the timber export markets of Malaysia and Thailand. In Malaysia, rubberwood has grown from 26% of total exported wood products in 1998 to 35% in 2007. A high proportion of furniture products (80%) is rubberwood, whereas the contribution of rubberwood to other wooden products is less than 20%. Only 10% of sawn timber and logs is rubberwood. In Thailand, rubberwood contributes to around 60% of total exported wood products, arising from a high share of not only furniture products (70%) but also other wood products (around 50%) and sawn timber and logs, which have increased in share from 40% in 1998 to 79% in 2007. We conclude that the high proportion of rubberwood products in the wood export markets of these two countries is a result of: (1) scarcity of raw wood materials because of strict controls on the logging of natural forests; and (2) governmental support to rubberwood production, including financial support to rubber planters and technical assistance to downstream timber processors.  相似文献   

Estimation of rubberwood production in Cambodia     

Akira Shigematsu  Nobuya Mizoue  Kumiko Ide  Kakada Khun  Muthavy Pheng  Shigejiro Yoshida  Katsuhisa Kohroki  Noriko Sato 《New Forests》2011,42(2):149-162

We estimated the production of rubberwood from 1996 to 2011 in Cambodia. We employed data from interview surveys with three rubberwood processing companies and statistics from estate rubber plantations and wood retailing companies. The result was that the end use of rubberwood in Cambodia was the sawntimber products, being exported to Vietnam and China. The yield rate from rubberwood stumpage into sawn timber was between 11.6 and 14.9%, closely matching the rates of Malaysia and Thailand. The average production of rubberwood roundwood from 1996 to 2011 was 254,697 m³/year, of which sawn timber as well as residuals in secondary processing was 84,559 and 170,138 m³/year, respectively. Although the timber production of Cambodia has declined sharply due to the strict restriction of natural forest logging, rubberwood could explain more than 60% of the domestic industrial roundwood production from 2000. We suggest the necessity of monitoring the expansion of rubber plantations in new rubber producing countries and linking the rubberwood production with the regional wood resource management.  相似文献   

Kinetic Parameters of Gross N Mineralization of Peat Soils as Related to the Composition of Soil Organic Matter   总被引：1，自引：0，他引：1  

Bentio Heru Purwanto  Akira Watanabe  Jong Foh Shoon  Ken-ichi Kakuda  Ho Ando 《Soil Science and Plant Nutrition》2005,51(1):109-115

Peat land has been considered as an alternative type of land for agricultural development especially in the tropics. In the present study, the N-supplying capacity, one of the most important soil properties in terms of crop production, of peat soils was examined. Ten peat soil samples were collected from Indonesia, Malaysia, and Japan. Gross N mineralization in the soil samples was estimated using a zero-order model, and kinetic parameters of mineralization were determined using a simple type model. Soil organic matter composition was investigated using ¹³C CPMAS NMR. Mineralization potential ( N ₀), apparent activation energy ( E _a), and mineralization rate constant ( k ) ranged between 571–2,445 mg kg⁻¹, 281–8,181 J mol⁻¹, and 0.009–0.020 d⁻¹, respectively. Although none of the parameters showed a significant correlation with the soil C/N ratio, a negative correlation was observed between the k value and the ratio of the proportion of alkyl C in total C to that of O -alkyl C estimated by ¹³C CPMAS NMR. The latter suggested that the k values were higher in the peat soils relatively rich in readily decomposable organic matter including carbohydrates.  相似文献   

Displacement above the hypocenter of the 2011 Tohoku-Oki earthquake   总被引：3，自引：0，他引：3  

Sato M  Ishikawa T  Ujihara N  Yoshida S  Fujita M  Mochizuki M  Asada A 《Science (New York, N.Y.)》2011,332(6036):1395

The moment magnitude (M(w)) = 9.0 2011 Tohoku-Oki mega-thrust earthquake occurred off the coast of northeastern Japan. Combining Global Positioning System (GPS) and acoustic data, we detected very large sea-floor movements associated with this event directly above the focal region. An area with more than 20 meters of horizontal displacement, that is, four times larger than those detected on land, stretches several tens of kilometers long along the trench; the largest amount reaches about 24 meters toward east-southeast just above the hypocenter. Furthermore, nearly 3 meters of vertical uplift occurred, contrary to observed terrestrial subsidence.  相似文献   

The crystal structure of a sodium galactose transporter reveals mechanistic insights into Na+/sugar symport     

Faham S  Watanabe A  Besserer GM  Cascio D  Specht A  Hirayama BA  Wright EM  Abramson J 《Science (New York, N.Y.)》2008,321(5890):810-814

Membrane transporters that use energy stored in sodium gradients to drive nutrients into cells constitute a major class of proteins. We report the crystal structure of a member of the solute sodium symporters (SSS), the Vibrio parahaemolyticus sodium/galactose symporter (vSGLT). The approximately 3.0 angstrom structure contains 14 transmembrane (TM) helices in an inward-facing conformation with a core structure of inverted repeats of 5 TM helices (TM2 to TM6 and TM7 to TM11). Galactose is bound in the center of the core, occluded from the outside solutions by hydrophobic residues. Surprisingly, the architecture of the core is similar to that of the leucine transporter (LeuT) from a different gene family. Modeling the outward-facing conformation based on the LeuT structure, in conjunction with biophysical data, provides insight into structural rearrangements for active transport.  相似文献   

Teleportation of nonclassical wave packets of light     

Lee N  Benichi H  Takeno Y  Takeda S  Webb J  Huntington E  Furusawa A 《Science (New York, N.Y.)》2011,332(6027):330-333

We report on the experimental quantum teleportation of strongly nonclassical wave packets of light. To perform this full quantum operation while preserving and retrieving the fragile nonclassicality of the input state, we have developed a broadband, zero-dispersion teleportation apparatus that works in conjunction with time-resolved state preparation equipment. Our approach brings within experimental reach a whole new set of hybrid protocols involving discrete- and continuous-variable techniques in quantum information processing for optical sciences.  相似文献   

Molecular mapping for seedling cold tolerance QTLs in rice     

ZhanQingcai SaidoKoji KatoAkira 《农业科学与技术》2003,4(1):8-15

The quantitative trait loci(QTLs)for cold tolerance relative characters were identified with microsatellite markers.Ten QTLs located on chromosome1,3,4,5,6,8,9,11(two)and 12were detected for seedling height at different low temperature.Only 2 of these were detected at the same locus at four environments.1 was significant at three environments.6 were significant at two environments and 1 was significant at one environment.Seven QTLs located on chromosome 1(two),2(two),5,6,8were found for ow temperature chlorosis resistance and five QTLs located on chromosome 3,4,7,8,11resistant to chilling injury.The amount of variation explained by indivdual QTL ranged from 4.85%to 49.34%,There was no linkage relationship among the three characters.which indicates seediling cold tolerance is a complex character and is controlled by different QTLs.  相似文献