The effect of piscidin antimicrobial peptides on the formation of Gram-negative bacterial biofilms     

Benjamin S. Prior  Miles D. Lange  Scott A. Salger  Benjamin J. Reading  Eric Peatman  Benjamin H. Beck 《Journal of fish diseases》2022,45(1):99-105

Fish-derived antimicrobial peptides are an important part of the innate immune system due to their potent antimicrobial properties. Piscidins are a class of antimicrobial peptides first described in hybrid striped bass (Morone chrysops x Morone saxatilis) but have also been identified in many other fish species. Previous work demonstrated the broad antimicrobial activity of piscidins against Gram-negative and Gram-positive bacterial species. This study sought to determine the extent to which class I (striped bass piscidin 1, white bass piscidin 1 and striped bass/white bass piscidin 3) and class II (striped bass piscidin 4 and white bass piscidin 5) piscidins inhibit biofilm formation of different Gram-negative bacteria. In general, the class I and II piscidins demonstrate potent activity against Escherichia coli and Flavobacterium columnare biofilms. The class II piscidins showed more activity against E. coli and F. columnare isolates than did the class I piscidins. The piscidins in general were much less effective against inhibiting Aeromonas hydrophila and A. veronii biofilm growth. Only the class I piscidins showed significant growth inhibition among the Aeromonas spp. examined.  相似文献   

Evidence for long‐term spatial displacement of breeding and pupping harbour seals by shellfish aquaculture over three decades     

Benjamin H. Becker  David T. Press  Sarah G. Allen 《水产资源保护:海洋与淡水生态系统》2011,21(3):247-260

• 1. Shellfish mariculture is increasing worldwide and often occurs adjacent to marine mammal breeding and feeding habitat. To better understand breeding pinniped vulnerability to potential shellfish mariculture disturbance and displacement effects in a US National Park, potential mechanisms were explored that may affect the proportion of harbour seals (Phoca vitulina) selecting high quality haul‐out sites near shellfish aquaculture within a large colony, and overall seal utilization of that colony in relation to other regional colonies.
• 2. Seal haul‐out sites isolated from the mainland (no predator access) had higher pup:adult ratios, indicating they are generally more important for pupping. Short‐term human disturbance did not have a significant effect on spatial use, but rather spatial use was pre‐determined by general sandbar isolation. Using multiple competing hypothesis and an information‐theoretic approach, it was found that within the estuary, after removing effects of El Niño, the proportion of seals (total seals and pups only) hauled out near mariculture sites was 8 ± 2% lower during years of higher oyster harvest. Annual oyster harvest was used as a measure of aquaculture activity that could result in direct disturbance or indirect displacement of harbour seals.
• 3. At the regional scale, oyster harvest, seal counts at a nearby colony, and loss of a major haul‐out site within the estuary, best explained pup and total seal use compared with the region. Regional population size, short‐term human disturbance rate, and other factors were not important. Concurrent with higher oyster harvest, the proportion of regional seals using the estuary declined by 7 ± 2% for seal pups (–65 ± 18 total pups), and 5 ± 2% for total counts ( ? 192 ± 58 total seals). These findings (both within the estuary and at the regional scale) were essentially identical whether modelling oyster harvest as either a continuous or categorical (low/high) variable and when using either frequentist or Bayesian statistical analyses.
• 4. Marine reserves set aside for wildlife may be less effective when the highest quality breeding and pupping sites are adjacent to regular aquaculture activities. These effects may not be detectable until additional natural variation lowers the quality of nearby habitats. Published in 2011. This article is a US Government work and is in the public domain in the USA.

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The importance of gallery forests in the tropical lowlands of Costa Rica for understorey forest birds     

Benjamin S. Seaman  Christian H. Schulze 《Biological conservation》2010,143(2):391-398

Rivers and streams lined by narrow forest strips are common in the lowland countryside of south-western Costa Rica. We studied the importance of these gallery forests for understorey birds, especially forest species. Using mist-nets, we captured 1110 birds belonging to 90 species between June and September 2007 at 16 sites spread equally over four habitat types: forest interior, forest margin, gallery forest connected to closed forest, and isolated gallery forest. Though isolated gallery forests had the greatest number of expected species in total, they supported the lowest number of forest-specialist species, lower even than connected gallery forests. Granivorous birds showed an increase from forest to isolated gallery forest, all other feeding guilds however showed no change. The studied habitats differed from each other in their faunal composition. Assemblages of three species groups categorised by their habitat preferences (forest specialists, forest generalists, non-forest species) showed nested distribution patterns across the four habitats. There was no significant difference in the proportion of birds with brood patches or of recaptures across the studied habitat types, leading to the assumption that birds not only use gallery forests for movement and foraging but also for reproduction. Though of limited conservation value for most forest understorey birds, at least for a small fraction of forest species gallery forests constitute an important secondary habitat. More significantly, they can form corridors or stepping stones that allow movements within the matrix of human-dominated habitats, and represent an important landscape component benefiting total bird species richness in the Costa Rican countryside.  相似文献   

Mechanical Evaluation of the Equine Laryngoplasty     

Benjamin J. Ahern  Eric J. Parente 《Veterinary surgery : VS》2010,39(6):661-666

Objectives: Mechanical evaluation of the equine laryngoplasty. Study Design: Experimental. Animal Population: Cadaveric cricoid (n=36) and arytenoid (46) cartilages. Methods: Arytenoid and cricoid cartilage specimens were embedded for testing. Suture material (2 Ethilon^®, 5 Ethibond^®, or 5 Fiberwire^®) was inserted simulating laryngoplasty procedures. Constructs were evaluated in single or cyclic loading. Single cycle tests recorded load at failure and stiffness. Cyclical tests recorded displacement after 10,000 cycles. ANOVA and t‐tests were used (significance P<.05). Results: The arytenoid Ethibond^® (241.10±47.67 N) constructs were stronger in single cycle than Ethilon^® (133.85±27.89 N) and Fiberwire^® (142.67±32.40 N). The cricoid Ethibond^® (220.39±49.11 N) constructs were stronger than Ethilon^® (171.93±21.19). The stiffness of Ethilon^® constructs was lower in both the arytenoid and cricoid compared with Ethibond^® and Fiberwire^®. The arytenoids failed at a lower load than the cricoids for Ethilon^® and Fiberwire^® but not Ethibond^® constructs. In cyclic testing complete failure of either cartilage did not occur. Arytenoid Ethibond^® constructs (0.43±0.21 mm) had less distraction than Ethilon^® (0.92±0.41 mm) and a trend for less compared with Fiberwire^® (0.83±0.43 mm; P=.0513). Cricoid Ethibond^® constructs (0.45±0.18 mm) had less distraction compared with Ethilon^® (1.04±0.30 mm) and Fiberwire^® (0.97±0.45 mm). Conclusions: Ethibond^® was superior to Ethilon^® and Fiberwire^® constructs in vitro. Clinical Relevance: Abduction loss after laryngoplasty is a common complication. The results of this study suggest that the use of Ethibond^® should minimize abduction loss after surgery relative to the other materials tested.  相似文献   

Assessment of yocoboue wild oil palm (Elaeis guineensis Jacq.) from Côte d'Ivoire     

Claude Bakoumé  Benjamin Adon  Benoît Cochard  Françoise Potier  Tristan Durand-Gasselin  Philippe Amblard 《Euphytica》2001,121(1):59-64

Following a survey involving wild oil palm groves in Côte d’Ivoire as a whole in 1968, 17 parents were chosen at Yocoboué (southernCôte d’Ivoire). Agronomic performance of the 17 parents was assessed through Deli × Yocoboué hybrids in 3 trials grown at La Mé (Côte d’Ivoire), Mondoni and La Dibamba (Cameroon).When compared to the Deli × La Mé progenies used as controls, the Deli × Yocoboué hybrids produced 91% for total bunch weight and86% for oil yields. However, the genetic variability within the Deli × Yocoboué progenies allows to select individual progenies as productive as the Deli × La Mé controls, for breeding purposes. A study of major agronomic traits led to the choice of parent YO 11 T , which combines the largest number of favourable traits. On average, Deli × Yocobouéprogenies have slower vertical growth and are susceptible to Fusarium wilt, except 2 parents (YO 3 T and YO 9 T), which seem to be resistant.  相似文献   

The effect of introgressions of wheat D-genome chromosomes into 'Presto' triticale   总被引：1，自引：0，他引：1  

Hikmet Budak  P. Stephen Baenziger  Brian S. Beecher  Robert A. Graybosch  Benjamin T. Campbell  Marry J. Shipman  Mustafa Erayman  Kent M. Eskridge 《Euphytica》2004,137(2):261-270

Hexaploid triticale (X Triticosecale Wittmack) (2n= 6x= 42, AABBRR) and wheat (Triticum aestivum L.) (2n= 6x= 42, AABBDD) differ in their R and D-genomes. This produces differences in both agronomic and end-use quality characteristics. Our objective was to determine how introgressions of individual chromosomes from the D-genome of wheat affect these characteristics of a winter triticale 'Presto'. We studied the effects of 18 D-genome chromosome substitution lines, 15 sib-lines as controls, and five check cultivars at Lincoln, NE in 1996, using a randomized complete block design with two replications. The experiment was repeated at Lincoln and Mead, NE in 1997 and 1998 with 15 substitution lines that survived the first winter in Lincoln, along with their 12 control sibs and five check cultivars. Few D-genome chromosomes had positive effects. Chromosomes 2D, 4D, and 6D significantly reduced plant height when substituted for 2R, 4B, and 6R, respectively. No grain yield increases were associated with any of the D-genome chromosomes tested, but three substitutions decreased the grain yield. Depending on the allele of the hardness gene present, chromosome 5D increased or decreased kernel hardness when substituted for 5R or 5A, respectively. Introgressions of chromosomes 1D and 6D improved end-use quality characteristics of Presto. These results suggest that apart from beneficial effects of individual loci located on the D-genome chromosomes, no major benefit can be expected from D-genome chromosome substitutions.  相似文献   

Tyrosine cross-links: molecular basis of gluten structure and function     

Tilley KA  Benjamin RE  Bagorogoza KE  Okot-Kotber BM  Prakash O  Kwen H 《Journal of agricultural and food chemistry》2001,49(5):2627-2632

The formation of the large protein structure known as "gluten" during dough-mixing and bread-making processes is extremely complex. It has been established that a specific subset of the proteins comprising gluten, the glutenin subunits, directly affects dough formation and breadmaking quality. Glutenin subunits have no definitive structural differences that can be directly correlated to their ability to form gluten and affect dough formation or breadmaking quality. Many protein structural studies, as well as mixing and baking studies, have postulated that disulfide bonds are present in the gluten structure and contribute to the process of dough formation through the process of disulfide-sulfhydryl exchange. Evidence presented here indicates that tyrosine bonds form in wheat doughs during the processes of mixing and baking, contributing to the structure of the gluten network. The relative contributions of tyrosine bonds and disulfide--sulfhydryl interchange are discussed.  相似文献   

Identification of QTLs for phenolic compounds in oilseed rape (<Emphasis Type="Italic">Brassica napus L.</Emphasis>) by association mapping using SSR markers     

Abbas Rezaeizad  Benjamin Wittkop  Rod Snowdon  Maen Hasan  Valiollah Mohammadi  Abbas Zali  Wolfgang Friedt 《Euphytica》2011,177(3):335-342

Association mapping identifies quantitative trait loci (QTLs) by examining the marker-trait associations that can be attributed to the strength of linkage disequilibrium between markers and functional polymorphisms across a set of diverse germplasm. In this study, association mapping was performed to detect QTL-linked and genome wide SSR markers linked to phenolic compounds of extraction meal in a population of 49 genetically diverse oilseed rape cultivars of dark-seeded, winter-type oilseed rape accessions. Correction for population structure was performed using 559 genome wide SSR markers. Results showed that seed colour is an important contributor to seed meal quality. Totally, 52 SSR markers linked to phenolic compounds were detected, five of them being QTL linked markers. Some of these markers were already mapped on Brassica napus chromosomes that contain known QTL controlling oilseed rape meal quality traits. Our results demonstrate that association mapping is a useful approach to complement and enhance previous QTL information for marker-assisted selection.  相似文献   

Multipotent Drosophila intestinal stem cells specify daughter cell fates by differential notch signaling     

Ohlstein B  Spradling A 《Science (New York, N.Y.)》2007,315(5814):988-992

The adult Drosophila midgut contains multipotent intestinal stem cells (ISCs) scattered along its basement membrane that have been shown by lineage analysis to generate both enterocytes and enteroendocrine cells. ISCs containing high levels of cytoplasmic Delta-rich vesicles activate the canonical Notch pathway and down-regulate Delta within their daughters, a process that programs these daughters to become enterocytes. ISCs that express little vesiculate Delta, or are genetically impaired in Notch signaling, specify their daughters to become enteroendocrine cells. Thus, ISCs control daughter cell fate by modulating Notch signaling over time. Our studies suggest that ISCs actively coordinate cell production with local tissue requirements by this mechanism.  相似文献   

Nanominerals, mineral nanoparticles, and Earth systems   总被引：4，自引：0，他引：4  

Hochella MF  Lower SK  Maurice PA  Penn RL  Sahai N  Sparks DL  Twining BS 《Science (New York, N.Y.)》2008,319(5870):1631-1635

Minerals are more complex than previously thought because of the discovery that their chemical properties vary as a function of particle size when smaller, in at least one dimension, than a few nanometers, to perhaps as much as several tens of nanometers. These variations are most likely due, at least in part, to differences in surface and near-surface atomic structure, as well as crystal shape and surface topography as a function of size in this smallest of size regimes. It has now been established that these variations may make a difference in important geochemical and biogeochemical reactions and kinetics. This recognition is broadening and enriching our view of how minerals influence the hydrosphere, pedosphere, biosphere, and atmosphere.  相似文献