Tracking the structural and functional development of a perennial pepperweed (Lepidium latifolium L.) infestation using a multi-year archive of webcam imagery and eddy covariance measurements     

O. Sonnentag  M. Detto  R. Vargas  Y. Ryu  B.R.K. Runkle  M. Kelly  D.D. Baldocchi 《Agricultural and Forest Meteorology》2011,151(7):916-926

The continued spread of invasive weeds is threatening ecosystem health throughout North America. Understanding the relationships between invasive weeds’ key phenological phases and structural and/or functional canopy development is an essential step for making informed decisions regarding their management. We analyzed a three-year image archive obtained from an inexpensive webcam overlooking a perennial pepperweed (Lepidium latifolium L.) infestation in California to explore the ability of red (R)-green (G)-blue (B) color space information to track the structural and functional development of the pepperweed. We characterized structural and functional canopy development through surface roughness length (z_0m; a proxy for canopy height and leaf area index) and canopy photosynthesis (F_A), respectively, both of which we derived from eddy covariance measurements. Here we demonstrate the use of cross-correlation functions to determine the temporal lags between chromatic coordinates and two color indices, all calculated from RGB brightness levels, with z_0m and F_A. We found that these color metrics fail to represent the structural and/or functional state of the canopy. In contrast, relative luminance (CIE Y) appears to be a better indicator for z_0m and especially for F_A. We calculated CIE Y from pepperweed RGB brightness levels in relation to hypothetical horizontal reference RGB brightness levels. We obtained the latter by applying the ratio between horizontally measured and hypothetical incoming solar radiation on a vertical surface to RGB brightness levels of a vertically oriented reference of invariant light-grey color. We conclude that webcam image archives may provide an inexpensive tool for making informed decisions regarding the timing but not for assessing the effectiveness of invasive plant control measures such as mowing.  相似文献   

Effects of different application timings of methane fermentation digested liquid to paddy plots on soil nitrogen and rice yield     

Satoko Watanabe  Kimihito Nakamura  Chan Seok Ryu  Michihisa Iida  Shigeto Kawashima 《Soil Science and Plant Nutrition》2013,59(2):224-237

Treatment of animal and food wastes using a methane fermentation technique is drawing considerable public attention as a suitable option for the utilization of biomass resources. The application of a fermentation byproduct (methane fermentation digested liquid) as an agricultural fertilizer has been investigated. Determining the appropriate timing required for applying digested liquid on a rice (Oryza sativa L.) paddy plot is important. The concentrations of soil nitrogen (N) components and rice yield should be considered because digested liquid contains both inorganic and organic N. This study compares the N transformation and the rice yield and growth at different application times over a period of 3 y. The effects of the timing of basal application on soil N were different and the timing that maximized the rice yield was different in each year. Days before ponding (DBP) affected soil N before mid-summer drainage, and rice growth rates at the panicle formation stage and the ear emergence stage. The effects of DBP disappeared before harvest. The results indicated that sufficient potentially mineralizable N existed regardless of DBP, and the effect of DBP lessened after the mid-summer drainage, which coincides with the period when N uptake is most active.  相似文献   

Formation and properties of hydroxy iron(iii) oligomer-citrate complex     

Shin-Ichiro Wada  Takashi Ryu 《Soil Science and Plant Nutrition》2013,59(3):725-728

Instantaneous neutralization of Fe (III) chloride dissolved in N a citrate by powdery NaHC03 gave stable clear brown sols. The sol particles separated by dialysis and freeze-drying showed a single diffraction peak at 2 nm and a citrate/Fe molar ratio of about 0.2 irrespective of the composition of the starting solutions. This indicates that the product may be a novel phase of Fe (III) citrate.  相似文献   

Seaweeds and Their Natural Products for Preventing Cardiovascular Associated Dysfunction     

Bomi Ryu  Young-Sang Kim  You-Jin Jeon 《Marine drugs》2021,19(9)

Cardiovascular disease (CVD), which involves the onset and exacerbation of various conditions including dyslipidemia, activation of the renin–angiotensin system, vascular endothelial cell damage, and oxidative stress, is a leading cause of high mortality rates and accounts for one-third of deaths worldwide. Accordingly, as dietary changes in daily life are thought to greatly reduce the prevalence of CVD, numerous studies have been conducted to examine the potential use of foods and their bioactive components for preventing and treating CVD. In particular, seaweeds contain unique bioactive metabolites that are not found in terrestrial plants because of the harsh environment in which they survive, leading to in vitro and in vivo studies of their prevention and treatment effects. This review summarizes studies that focused on the beneficial effects of seaweeds and their natural products targeting markers involved in a cascade of mechanisms related to CVD pathogenesis. The purpose of this review is to describe the potential of seaweeds and their natural products for preventing and treating CVD based on in vivo and in vitro studies. This review provides a basis for future research in the field of marine drugs.  相似文献   

Extracellular cyclic adenosine monophosphate‐dependent protein kinase A autoantibody and C‐reactive protein as serum biomarkers for diagnosis of cancer in dogs     

Min‐Ok Ryu  Byung‐Gak Kim  Ul‐Soo Choi  Kwan‐Hyuck Baek  Young‐Ki Song  Qiang Li  Kyoung‐Won Seo  Sandra Ryeom  Hwa‐Young Youn  Dong‐Ha Bhang 《Veterinary and comparative oncology》2019,17(1):99-106

Protein kinase A, a cyclic adenosine monophosphate (AMP)‐dependent enzyme, normally exists within mammalian cells; however, in cancer cells, it can leak out and be found in the serum. Extracellular cyclic AMP‐dependent protein kinase A (ECPKA) has been determined to increase in the serum of cancer‐bearing dogs. However, there have been no reports in the veterinary literature on serum ECPKA autoantibody (ECPKA‐Ab) expression in dogs with cancer. The aim of this study was to evaluate ECPKA‐Ab and C‐reactive protein (CRP) as serum biomarkers for cancer in dogs. ECPKA‐Ab and CRP levels were detected by an enzyme‐linked immunosorbent assay in serum samples from dogs with malignant tumours (n = 167), benign tumours (n = 42), or non‐tumour disease (n = 155) and from healthy control dogs (n = 123). ECPKA‐Ab and CRP levels were significantly higher in the dogs with malignant tumours than in those with benign tumours or non‐tumour diseases, as well as in the healthy controls (P < 0.001, Kruskal‐Wallis test). There was a significant positive correlation between the neoplastic index, which was developed using ECPKA‐Ab and CRP levels, and the presence of cancer in dogs (P < 0.001); the area under the receiver‐operating characteristic curve was estimated to be >0.85 (P < 0.001). In conclusion, ECPKA‐Ab is a potential serum biomarker for a broad spectrum of cancers. Combined measurement of CRP and ECPKA‐Ab levels in serum improves the sensitivity and accuracy of a diagnosis of cancer in dogs.  相似文献   

Generation of RUNX3 knockout pigs using CRISPR/Cas9‐mediated gene targeting          下载免费PDF全文

J‐T Kang  J Ryu  B Cho  E‐J Lee  Y‐J Yun  S Ahn  J Lee  D‐Y Ji  K Lee  K‐W Park 《Reproduction in domestic animals》2016,51(6):970-978

Pigs are an attractive animal model to study the progression of cancer because of their anatomical and physiological similarities to human. However, the use of pig models for cancer research has been limited by availability of genetically engineered pigs which can recapitulate human cancer progression. Utilizing genome editing technologies such as CRISPR/Cas9 system allows us to generate genetically engineered pigs at a higher efficiency. In this study, specific CRISPR/Cas9 systems were used to target RUNX3, a known tumour suppressor gene, to generate a pig model that can induce gastric cancer in human. First, RUNX3 knockout cell lines carrying genetic modification (monoallelic or biallelic) of RUNX3 were generated by introducing engineered CRISPR/Cas9 system specific to RUNX3 into foetal fibroblast cells. Then, the genetically modified foetal fibroblast cells were used as donor cells for somatic cell nuclear transfer, followed by embryo transfer. We successfully obtained four live RUNX3 knockout piglets from two surrogates. The piglets showed the lack of RUNX3 protein in their internal organ system. Our results demonstrate that the CRISPR/Cas9 system is effective in inducing mutations on a specific locus of genome and the RUNX3 knockout pigs can be useful resources for human cancer research and to develop novel cancer therapies.  相似文献   

Muscle Protein Hydrolysates and Amino Acid Composition in Fish     

Bomi Ryu  Kyung-Hoon Shin  Se-Kwon Kim 《Marine drugs》2021,19(7)

Fish muscle, which accounts for 15%–25% of the total protein in fish, is a desirable protein source. Their hydrolysate is in high demand nutritionally as a functional food and thus has high potential added value. The hydrolysate contains physiologically active amino acids and various essential nutrients, the contents of which depend on the source of protein, protease, hydrolysis method, hydrolysis conditions, and degree of hydrolysis. Therefore, it can be utilized for various industrial applications including use in nutraceuticals and pharmaceuticals to help improve the health of humans. This review discusses muscle protein hydrolysates generated from the muscles of various fish species, as well as their amino acid composition, and highlights their functional properties and bioactivity. In addition, the role of the amino acid profile in regulating the biological and physiological activities, nutrition, and bitter taste of hydrolysates is discussed.  相似文献   

Evaluation of enhanced hygroscopicity, bifidogenicity, and anticariogenicity of enzymatically synthesized beta-galactosyl-trehalose oligosaccharides     

Ryu SI  Kim BG  Park MS  Lee YB  Lee SB 《Journal of agricultural and food chemistry》2007,55(10):4184-4188

beta-Galactosyl-trehalose oligosaccharides (beta-GTOs) were enzymatically prepared as a mixture of 6-beta-galactosyl-trehalose (1) and 4-beta-galactosyl-trehalose (2) with a 9:1 ratio (w/w). The beta-GTO mixture showed a highly enhanced hygroscopicity as compared to those of trehalose and other sugars used. At 72 h of incubation under 90% relative humidity and room temperature, it had a large increase in weight due to its moisture absorption, which was five times larger than that of trehalose, 1.9 times larger than that of sucrose, and 1.5 times larger than that of maltotriose. It was very effective in the growth promotion of Bifidobacteria, such as Bifidobacterium longum and Bifidobacterium bifidum, which was better than the growth promotion in the cases of trehalose and galactooligosaccharide. It also showed a highly anticariogenic property; it had only 10% cell proliferation of Streptococcus sobrinus for that of the sucrose control and 60% inhibition of insoluble glucan synthesis. Its effectiveness of inhibition was two and 1.5 times better than that of trehalose and one and two times than xylitol, respectively, against cell growth and glucan synthesis. Conclusively, the functionality of the beta-GTO in terms of hygroscopicity, bifidogenicity, and anticariogenicity was considerably improved as compared to that of trehalose. It is thus suggested that the beta-GTO might be applied as an effective humectant and prebiotic substitute with enhanced noncariogenicity in food applications.  相似文献   

Benzodiazepines inhibit the acetylcholine receptor-operated potassium current (IK.ACh) by different mechanisms in guinea-pig atrial myocytes     

Okada M  Mizuno W  Nakarai R  Matada T  Yamawaki H  Hara Y 《The Journal of veterinary medical science / the Japanese Society of Veterinary Science》2012,74(7):879-884

The anticholinergic effects of 7 benzodiazepines, bromazepam, camazepam, chlordiazepoxide, diazepam, lorazepam, medazepam and triazolam, were compared by examining their inhibitory effects on the acetylcholine receptor-operated potassium current (I(K).(ACh)) in guinea-pig atrial myocytes. All of these benzodiazepines (0.3-300 μM) inhibited carbachol (1 μM)-induced I(K).(ACh) in a concentration-dependent manner. The ascending order of IC(50) values for carbachol-induced I(K).(ACh) was as follows; medazepam, diazepam, camazepam, triazolam, bromazepam, lorazepam and chlordiazepoxide (>300 μM). The compounds, except for bromazepam, also inhibited I(K).(ACh) activated by an intracellular loading of 100 μM guanosine 5'-[γ-thio]triphosphate (GTPγS) in a concentration-dependent manner. The ascending order of IC(50) values for GTPγS-activated I(K).(ACh) was as follows; medazepam, diazepam, camazepam, lorazepam, triazolam chlordiazepoxide (>300 μM) and bromazepam (>300 μM). To clarify the molecular mechanism of the inhibition, IC(50) ratio, the ratio of IC(50) for GTPγS-activated I(K).(ACh) to carbachol-induced I(K).(ACh), was calculated. The IC(50) ratio for camazepam, diazepam, lorazepam, medazepam and triazolam was close to unity, while it for chlordiazepoxide could not be calculated. These compounds would act on the GTP binding protein and/or potassium channel to achieve the anticholinergic effects in atrial myocytes. In contrast, since the IC(50) ratio for bromazepam is presumably much higher than unity judging from the IC(50) values (104.0 ± 30.0 μM for carbachol-induced I(K).(ACh) and >300 μM for GTPγS-activated I(K).(ACh), it would act on the muscarinic receptor. In summary, benzodiazepines had the anticholinergic effects on atrial myocytes through inhibiting I(K).(ACh) by different molecular mechanisms.  相似文献   

Effect of matrigel on the osteogenic potential of canine adipose tissue-derived mesenchymal stem cells     

Kang BJ  Ryu HH  Park SS  Kim Y  Woo HM  Kim WH  Kweon OK 《The Journal of veterinary medical science / the Japanese Society of Veterinary Science》2012,74(7):827-836

Adipose tissue-derived mesenchymal stem cells (Ad-MSCs) are a promising source of cells for bone tissue engineering. Matrigel is a basement membrane extract containing multiple extracellular components. This mixture may promote the osteogenic differentiation of MSCs and provide a more appropriate microenvironment for transplanted cells. Here, we investigated the effect of Matrigel on the osteogenic potential of Ad-MSCs. Canine Ad-MSCs were cultured in 2D and 3D matrices and implanted into subcutaneous pouches of dogs either with or without Matrigel. Culture mineralization, cell adhesion efficiency, cell proliferation, osteoid matrix production and alkaline phosphatase (ALP) and tartrate-resistant acid phosphatase activities were quantified and compared. Ad-MSCs grown in 2D cultures with Matrigel showed higher levels of calcium deposition and ALP activity than those grown in the absence of Matrigel under osteogenic conditions. In 3D cultures, the cells cultivated with Matrigel showed greater attachment, proliferation and osteogenic differentiation than those grown without Matrigel. In vivo, Ad-MSCs implanted with Matrigel showed higher osteogenic potential than those without Matrigel. In conclusion, these data suggest that the use of Matrigel can increase the osteogenic potential of canine Ad-MSCs.  相似文献