Principal component analysis applied to Fourier transform infrared spectroscopy for the design of calibration sets for glycerol prediction models in wine and for the detection and classification of outlier samples   总被引：1，自引：0，他引：1  

Nieuwoudt HH  Prior BA  Pretorius IS  Manley M  Bauer FF 《Journal of agricultural and food chemistry》2004,52(12):3726-3735

Principal component analysis (PCA) was used to identify the main sources of variation in the Fourier transform infrared (FT-IR) spectra of 329 wines of various styles. The FT-IR spectra were gathered using a specialized WineScan instrument. The main sources of variation included the reducing sugar and alcohol content of the samples, as well as the stage of fermentation and the maturation period of the wines. The implications of the variation between the different wine styles for the design of calibration models with accurate predictive abilities were investigated using glycerol calibration in wine as a model system. PCA enabled the identification and interpretation of samples that were poorly predicted by the calibration models, as well as the detection of individual samples in the sample set that had atypical spectra (i.e., outlier samples). The Soft Independent Modeling of Class Analogy (SIMCA) approach was used to establish a model for the classification of the outlier samples. A glycerol calibration for wine was developed (reducing sugar content < 30 g/L, alcohol > 8% v/v) with satisfactory predictive ability (SEP = 0.40 g/L). The RPD value (ratio of the standard deviation of the data to the standard error of prediction) was 5.6, indicating that the calibration is suitable for quantification purposes. A calibration for glycerol in special late harvest and noble late harvest wines (RS 31-147 g/L, alcohol > 11.6% v/v) with a prediction error SECV = 0.65 g/L, was also established. This study yielded an analytical strategy that combined the careful design of calibration sets with measures that facilitated the early detection and interpretation of poorly predicted samples and outlier samples in a sample set. The strategy provided a powerful means of quality control, which is necessary for the generation of accurate prediction data and therefore for the successful implementation of FT-IR in the routine analytical laboratory.  相似文献   

Molecular characterization of encephalomyocarditis virus strains isolated from an African elephant and rats in a French zoo     

Aurore Romey  Benjamin Lamglait  Yannick Blanchard  Fabrice Touzain  Helene Quenault  Anthony Relmy  Stephan Zientara  Sandra Blaise-Boisseau  Labib Bakkali-Kassimi 《Journal of veterinary diagnostic investigation》2021,33(2):313

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Geographical distribution of salmonella infected pig,cattle and sheep herds in Sweden 1993-2010     

Susanna Sternberg Lewerin  Lars Skog  Jenny Fr?ssling  Helene Wahlstr?m 《Acta veterinaria Scandinavica》2011,53(1):51

Background

The Swedish salmonella control programme covers the entire production chain, from feed to food. All salmonella serotypes are notifiable. On average, less than 20 cases of salmonella in food-producing animals are reported every year. In some situations, the cases would be expected to cluster geographically. The aim of this study was to illustrate the geographic distribution of the salmonella cases detected in pigs, cattle and sheep.

Methods

Data on all herds with pigs, cattle and sheep found to be infected with salmonella during the time period from 1993 to 2010 were obtained from the Swedish Board of Agriculture. Using the ArcGIS software, various maps were produced of infected herds, stratified on animal species as well as salmonella serotype. Based on ocular inspection of all maps, some were collapsed and some used separately. Data were also examined for temporal trends.

Results

No geographical clustering was observed for ovine or porcine cases. Cattle herds infected with Salmonella Dublin were mainly located in the southeast region and cattle herds infected with Salmonella Typhimurium in the most southern part of the country. Some seasonal variation was seen in cattle, but available data was not sufficient for further analyses.

Conclusions

Analyses of data on salmonella infected herds revealed some spatial and temporal patterns for salmonella in cattle. However, despite using 18 years'' of data, the number of infected herds was too low for any useful statistical analyses.  相似文献   

Normal color variations of the canine ocular fundus,a retrospective study in Swedish dogs     

Marie IKS Granar  Bo R Nilsson  Helene L Hamberg-Nystr?m 《Acta veterinaria Scandinavica》2011,53(1):13

Background

A retrospective study was made to demonstrate normal variations of the color and size of the tapetal area and color of the nontapetal area in the ocular fundus in dogs, correlating them to breed, age and coat color.

Methods

The study was based on protocols of five hundred and thirty-nine adult dogs describing eye examinations made during the years 1997-2001. The dogs were examined using an indirect ophthalmoscope in order to find heritable eye diseases. The following characteristics were recorded: breed; age; coat color; color and size of the tapetal area and color of the nontapetal area. Normal color variations in the fundus were studied and categorized with regard to breed, age and coat color. Chi-square analysis was used comparing distributions between factors. Differences between mean values were analysed with Student''s t-test or one-way-ANOVA. A logistic regression analysis was performed on the color of the tapetal area with the color of the coat and breed.

Results

Twenty breeds were represented. The mean age was 42.8 months. The most common colors of the tapetal area were yellow-green and orange, and the most common colors of the nontapetal area were dark brown and black. The analysis revealed that coat-color and breed concomitantly did not significantly influence tapetal color. Brown coated dogs often had a striped red and brown nontapetal area. The color of the tapetal area influenced the color of the nontapetal area. Smaller-sized breeds (such as Papillon) had a smaller tapetal area. A tapetal area was completely absent in 1.9%. The age did not influence the color of the tapetal area.

Conclusions

Color of the tapetal area was influenced by both coat color and breed, but neither of these was statistically more influential than the other. The color of the tapetal area influenced the color of the nontapetal area. The size of the tapetal area correlated to breed and to body size.  相似文献   

Effects of hyperbaric oxygen treatment on horses with experimentally induced endotoxemia     

Baumwart CA  Doherty TJ  Schumacher J  Willis RS  Adair HS  Rohrbach BW 《American journal of veterinary research》2011,72(9):1266-1275

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Leukocyte and platelet changes following low-dose lipopolysaccharide administration in five dogs     

Flatland B  Fry MM  LeBlanc CJ  Rohrbach BW 《Research in veterinary science》2011,90(1):89-94

Effects of low-dose LPS (0.1 μg/kg IV) on leukocyte and platelet parameters measured using an Advia 120 hematology analyzer were investigated. Five dogs received a saline sham treatment prior to LPS, and blood was collected before and 3, 6, and 24 h post-treatment. LPS-treated dogs had mild neutrophil toxic change and increased neutrophil bands at 3 and 6 h. Compared to saline-treated controls, total leukocyte, neutrophil, and monocyte counts of LPS-treated dogs were significantly decreased at 3 h and increased at 24 h. Compared to baseline, total leukocyte counts of LPS-treated dogs were significantly decreased at 3 h and increased at 24 h. Mean platelet volume was significantly increased and mean platelet component concentration was decreased at 3 h compared to baseline. Platelet count was significantly decreased at 3 and 6 h; plateletcrit did not change significantly. High dosage is not required in order to detect LPS-mediated hematologic effects in dogs. Low-dose LPS administration causes significant changes in leukocyte and platelet indices in dogs without causing severe clinical signs or death.  相似文献   

Optimization of a solid-phase extraction method using centrifugation for the determination of 16 polycyclic aromatic hydrocarbons in water     

Kouzayha A  Al Iskandarani M  Mokh S  Rabaa AR  Budzinski H  Jaber F 《Journal of agricultural and food chemistry》2011,59(14):7592-7600

A fast and reliable method for the determination of polycyclic aromatic hydrocarbons (PAHs) in water samples by solid-phase extraction (SPE) using centrifugation has been developed and optimized. A silica-based C18 cartridge was used; parameters affecting the extraction procedure such as type and volume of the elution solvent, breakthrough volume of the percolated water sample, drying of the sorbent, and evaporation of the elute have been studied. The innovation of this work was the examination of the use of a centrifugation technique in both the drying and elution steps. When combined with centrifugation, the volume of the elution solvent was reduced to 1 mL and the time for sorbent drying decreased also to 10 min under vacuum. Under optimal conditions, recoveries for the 16 U.S. EPA PAHs were between 70 and 85% and the relative standard deviation varied between 1 and 14%. Surrogate standard recoveries were similarly between 61 and 94% with a relative standard deviation between 2 and 15%. The simplicity of the described method, use of less of organic solvent, short procedure time, and good recoveries demonstrate the advantages of this environmentally friendly approach for routine analysis of numerous samples.  相似文献   

Medicine. The need for a global HIV vaccine enterprise     

Klausner RD  Fauci AS  Corey L  Nabel GJ  Gayle H  Berkley S  Haynes BF  Baltimore D  Collins C  Douglas RG  Esparza J  Francis DP  Ganguly NK  Gerberding JL  Johnston MI  Kazatchkine MD  McMichael AJ  Makgoba MW  Pantaleo G  Piot P  Shao Y  Tramont E  Varmus H  Wasserheit JN 《Science (New York, N.Y.)》2003,300(5628):2036-2039

A new collaborative model of research is needed to increase resources, to prioritize the R (ii) to increase the pace, reduce the overlap, and more systematically explore the elements of and delivery systems for vaccines; (iii) to use common standards for the prompt comparative testing of vaccine candidates; (iv) to expand resources for manufacturing vaccine candidates to speed their use in human trials; and (v) to increase the capacity for international clinical trials and to focus this effort toward quickly measuring the effectiveness of vaccine protection as prototype vaccine candidates are identified.  相似文献   

Effect of morphine and flunixin meglumine on isoflurane minimum alveolar concentration in goats     

Doherty TJ  Will WA  Rohrbach BW  Geiser DR 《Veterinary anaesthesia and analgesia》2004,31(2):97-101

OBJECTIVE: To determine the effect of morphine and flunixin meglumine on isoflurane (ISO) minimum alveolar concentration (MAC) in goats. STUDY DESIGN: Prospective, randomized experimental study. ANIMALS: Five adult, wether goats from 1 to 3 years in age, and weighing 24-65 kg. METHODS: Anesthesia was induced using ISO, which was delivered via a mask. Goats were intubated and ventilated to maintain an end-tidal carbon dioxide concentration between 25 and 30 mm Hg (3.3-4 kPa). End-tidal ISO concentration was measured using an infrared analyzer. The baseline ISO MAC that prevented purposeful movement in response to clamping a claw was determined. Following baseline MAC determination, each goat received one of the following four treatments intravenously (IV): morphine (2 mg kg(-1)), flunixin (1.5 mg kg(-1)), flunixin (1.5 mg kg(-1)) plus morphine (2 mg kg(-1)) or saline, and the MAC was re-determined. Goats were studied at weekly intervals, and each goat received each treatment in a randomized fashion. RESULTS: The baseline ISO MAC for the control treatment was 1.43%. Morphine reduced the MAC by 29.7%. Flunixin did not significantly decrease the MAC nor did it potentiate the effect of morphine on MAC. The quality of recovery was good in all cases. CONCLUSIONS: Morphine (2 mg kg(-1), IV) significantly reduced the ISO MAC in goats and did not adversely affect the quality of recovery. CLINICAL RELEVANCE: The use of morphine, at the dose studied, in association with ISO anesthesia, will allow a clinically significant reduction in the concentration of ISO required to maintain general anesthesia in goats.  相似文献   

Effect of caudal epidural xylazine on intraoperative distress and post-operative pain in Holstein heifers     

Chevalier HM  Provost PJ  Karas AZ 《Veterinary anaesthesia and analgesia》2004,31(1):1-10

Objective To compare the effects of caudal epidural xylazine versus saline on tolerance of paravertebral nerve block and flank surgery and on post‐operative pain in heifers used for a veterinary student training laboratory. Study design Randomized controlled prospective study. Animals Fourteen one‐year‐old, nongravid, healthy Holstein heifers, weighing 360 ± 5 kg. Methods Xylazine (0.05 mg kg^?1) or 0.9% saline (5 mL) was injected using a caudal epidural technique to seven heifers undergoing a flank surgery. Nerve block of the right paravertebral fossa was performed using equal parts of lidocaine 2% and bupivacaine 0.5%. Heart and respiratory rates, rectal temperature, rumination frequency, and appetite were recorded before and at 4, 8, and 24 hours after surgery. Scores were recorded for: tolerance of local anesthesia injections (pre‐operatively), sedation, ataxia and distress (intraoperatively, every 30 minutes), and pain (4, 8, and 24 hours post‐operatively). Results The animals reaction to local anesthetic injection was judged to be less in the xylazine group by both an experienced observer (p < 0.001) and student surgeons (p < 0.01). The xylazine group required less local anesthetic (82.9 ± 13.8 mL) versus the saline group (108.4 ± 19.6 mL, p = 0.035). Intraoperatively, xylazine heifers were more sedated at all times (p‐values from <0.001 to 0.017), were more ataxic for the first 1.5 hours (p‐values from <0.001 to 0.026), and lower in distress at all times (p‐values from <0.001 to 0.007). No difference in post‐operative pain or physiologic variables was found, except immediately post‐operatively, rectal temperature was higher in the xylazine group (39.5 ± 0.3 °C) than in the saline group (38.6 ± 0.2 °C, p < 0.001). Conclusion and clinical relevance Compared with epidural saline, caudal epidural xylazine reduced distress of anesthetic injection and surgical manipulation in heifers and an improvement in animal well‐being was apparent. This effect may have been as a result of sedation. Pre‐operative epidural xylazine did not appear to improve post‐surgical analgesia in our study.  相似文献