鸡FKBP5基因的克隆、生物信息学及组织表达谱分析     

唐贺贺  张真真  张献珍  蒋瑞瑞  李国喜  田亚东  康相涛  韩瑞丽 《中国畜牧兽医》2021,(1)

本研究旨在对鸡FK506结合蛋白5(FK506 binding protein 5,FKBP5)基因进行克隆和生物信息学分析,并检测其在鸡不同组织中的表达量。以鸡脾脏cDNA为模板,通过PCR方法扩增和克隆鸡FKBP5基因完整CDS区序列,并进行同源性比对及系统进化树构建;使用在线软件分析FKBP5蛋白的理化性质、疏水性、跨膜结构、信号肽、二级结构和三级结构;利用实时荧光定量PCR检测其在肢体内外翻畸形(valgus-varus deformity,VVD)组肉鸡和正常组肉鸡组织中的表达量,并绘制组织表达谱。结果显示,鸡FKBP5基因CDS区序列全长1350 bp,编码449个氨基酸;同源性比对和进化树分析表明,鸡FKBP5基因氨基酸序列与鹌鹑、鸭、壁虎、中华鳖、小鼠、人、猪、斑马鱼的同源性分别为98.4%、96.2%、85.8%、87.4%、81.1%、85.2%、86.1%和61.2%,与鹌鹑、鸭的亲缘关系最近,爬行类和哺乳类动物次之,与斑马鱼(鱼类)亲缘关系最远。鸡FKBP5蛋白分子质量为50.43 ku,理论等电点(pI)为5.94,半衰期为30 h,肽链N端为蛋氨酸(Met),不稳定系数为23.80,属于稳定蛋白;跨膜区和信号肽预测结果显示,FKBP5蛋白不属于跨膜蛋白和分泌型蛋白。结构域分析结果表明,该蛋白包括2个FKBP型肽基脯氨酰异构酶(FKBP-type peptidylprolyl isomerases)、3个四肽重复(TPR)序列,主要包含α-螺旋(46.77%)、延伸链(12.47%)和无规则卷曲(40.76%),且该蛋白与HSPA2、PPID、STIP1、HSP90AA1和HSP90AB1等互作蛋白具有很强的相关性。实时荧光定量PCR结果显示,FKBP5基因在鸡各组织中广泛表达,其中在软骨和法氏囊中表达量较高,在发病组肉鸡组织中的表达量均高于正常组肉鸡,且在心脏、腿肌、法氏囊、胸腺、软骨中表达量差异显著(P<0.05),在脾脏中表达量差异极显著(P<0.01)。本试验结果可为肉鸡骨骼疾病及腿部健康选育提供参考。  相似文献   

拷贝数变异在畜禽中的研究进展     

经珍珠  秦盼盼  陈冰洁  侯丹  魏成杰  李通  韩瑞丽  刘小军  田亚东  康相涛  李转见 《中国畜牧兽医》2021,48(7):2512-2522

拷贝数变异（copy number variation,CNV）具有多种形式的变异结构,在品种多样性、生物进化和疾病相关性等研究中起着重要作用,并具有片段长度大、覆盖范围广等特点。随着分子生物学的发展及DNA测序技术的日渐成熟,人们对遗传变异的研究不断向DNA分子水平深入,多态性标记在畜禽育种中已逐渐成为动物育种研究的趋势和主流。由于CNV对基因的调控和表达所造成的影响更为显著,因此,CNV在重要畜禽中的研究越来越多。目前,已检测出大量有关畜禽重要经济性状的基因序列变异,并有许多研究均表明CNV与动物的重要经济特征及疾病的发生有关。笔者主要通过参考国内外相关的研究报道,简述了CNV的相关研究背景、概念、突变机制,归纳总结了CNV对牛、羊、猪、鸡的经济性状、繁殖性状和疾病调控的影响,以期通过对这些重要畜禽的基因组学研究揭示其适应性遗传机理和表型性状差异的遗传基础,开发相应的分子遗传标记,为畜禽的标记辅助选育提供理论基础。  相似文献   

猪圆环病毒2型灭活疫苗中病毒抗原含量实时荧光定量PCR检测方法的建立     

李雪峰  康斌  赵炳武  武玉梅  戴伶俐  董鹏  张建春  张春阳  斯琴高娃 《畜牧与饲料科学》2021,42(1):8-13

依据GenBank公布的猪圆环病毒2型Cap基因序列,在保守区域设计特异性引物和TaqMan探针,优化反应体系,建立评价猪圆环病毒2型灭活疫苗中病毒含量的实时荧光定量PCR检测方法,对方法的特异性、敏感性和重复性进行试验,并验证灭活剂用量和灭活时间对检测结果的影响。结果显示：该方法只对猪圆环病毒2型基因有特异性扩增,其他3种对照病毒基因的扩增结果均为阴性;检测灵敏度达到10^2.0 TCID₅₀/mL,比普通PCR方法高100倍;方法的重复性好,对同一样品进行10次检测,变异系数为2.28%;不同灭活剂用量和灭活时间对结果的影响较小,不会因各厂家使用的灭活剂用量和灭活时间不同,影响疫苗对比实验的公平性。该研究成功建立了一种评价猪圆环病毒2型灭活疫苗中病毒含量的实时荧光定量PCR检测方法,用于猪圆环病毒2型灭活疫苗样品中病毒抗原含量的定量,其结果可以反映不同猪圆环病毒2型灭活疫苗样品中抗原含量差异,为研究猪圆环病毒2型灭活疫苗病毒抗原含量评估方法提供了新的思路。  相似文献   

Isolation and characterization of antimicrobial-resistant Escherichia coli from national horse racetracks and private horse-riding courses in Korea   总被引：1，自引：0，他引：1  

Yeon Soo Chung  Jae Won Song  Dae Ho Kim  Sook Shin  Young Kyung Park  Soo Jin Yang  Suk Kyung Lim  Kun Taek Park  Yong Ho Park 《Journal of veterinary science (Suw?n-si, Korea)》2016,17(2):199-206

Limited information is available regarding horse-associated antimicrobial resistant (AR) Escherichia (E.) coli. This study was designed to evaluate the frequency and characterize the pattern of AR E. coli from healthy horse-associated samples. A total of 143 E. coli (4.6%) were isolated from 3,078 samples collected from three national racetracks and 14 private horse-riding courses in Korea. Thirty of the E. coli isolates (21%) showed antimicrobial resistance to at least one antimicrobial agent, and four of the AR E. coli (13.3%) were defined as multi-drug resistance. Most of the AR E. coli harbored AR genes corresponding to their antimicrobial resistance phenotypes. Four of the AR E. coli carried class 1 integrase gene (intI1), a gene associated with multi-drug resistance. Pulsed-field gel electrophoretic analysis showed no genetic relatedness among AR E. coli isolated from different facilities; however, cross-transmissions between horses or horses and environments were detected in two facilities. Although cross-transmission of AR E. coli in horses and their environments was generally low, our study suggests a risk of transmission of AR bacteria between horses and humans. Further studies are needed to evaluate the risk of possible transmission of horse-associated AR bacteria to human communities through horse riders and horse-care workers.  相似文献   

Molecular cloning,purification and immunogenicity of recombinant Brucella abortus 544 malate dehydrogenase protein     

Alisha Wehdnesday Bernardo Reyes  Hannah Leah Tadeja Simborio  Huynh Tan Hop  Lauren Togonon Arayan  Suk Kim 《Journal of veterinary science (Suw?n-si, Korea)》2016,17(1):119-122

The Brucella mdh gene was successfully cloned and expressed in E. coli. The purified recombinant malate dehydrogenase protein (rMDH) was reactive to Brucella-positive bovine serum in the early stage, but not reactive in the middle or late stage, and was reactive to Brucella-positive mouse serum in the late stage, but not in the early or middle stage of infection. In addition, rMDH did not react with Brucella-negative bovine or mouse sera. These results suggest that rMDH has the potential for use as a specific antigen in serological diagnosis for early detection of bovine brucellosis.  相似文献   

Apparent ileal digestibility of nutrients and amino acids in soybean meal,fish meal,spray‐dried plasma protein and fermented soybean meal to weaned pigs          下载免费PDF全文

Jin Suk Jeong  Jae Won Park  Sang In Lee  In Ho Kim 《Animal Science Journal》2016,87(5):697-702

This study sought to determine whether fermentation could increase apparent ileal digestibility (AID) of dry matter (DM), nitrogen (N), energy (E) and amino acids (AA) in fermented soybean meal (FSBM) greater than that of soybean meal (SBM) in weaned pigs. Four weaned pigs (10.00 ± 0.30 kg) were surgically equipped with T‐cannulas and randomly followed a 4 × 4 Latin square design of treatments (SBM, FSBM, fish meal and spray‐dried plasma protein). Overall, the fermentation process was able to reduce the amount of anti‐nutritional factors (ANF), including trypsin inhibitors, raffinose and stachyose, in the FSBM diet, which were significantly reduced by 39.4, 92.2, and 92.9%, respectively, as compared to the SBM diet. As a consequence of ANF reduction in FSBM, the AID of DM, N and E as well as AA was significantly greater with FSBM than SBM. Taken all together, the fermentation process improved the nutritional quality of SBM, due to ANF reduction, leading to improvement of digestibility of AA. As such, FSBM can be potentially used as a specialized feed ingredient, especially for young animal diets in an attempt to reduce diet costs.  相似文献   

Differential expression of 3beta-hydroxysteroid dehydrogenase mRNA in rat testes exposed to endocrine disruptors     

Kim HH  Kwak DH  Yon JM  Baek IJ  Lee SR  Lee JE  Nahm SS  Jeong JH  Lee BJ  Yun YW  Nam SY 《The Journal of reproduction and development》2007,53(3):465-471

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Expression pattern of sulfated glycoprotein-2 (SGP-2) mRNA in rat testes exposed to endocrine disruptors   总被引：1，自引：0，他引：1  

Yon JM  Kwak DH  Cho YK  Lee SR  Jin Y  Baek IJ  Lee JE  Nahm SS  Choo YK  Lee BJ  Yun YW  Nam SY 《The Journal of reproduction and development》2007,53(5):1007-1013

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水氮调控对苜蓿与无芒雀麦混播草地生长和辐射利用的影响     

汪爱霞  齐广平  银敏华  康燕霞  马彦麟  汪精海  贾琼  唐仲霞  姜渊博 《干旱地区农业研究》2023,(2):168-178

针对我国内陆干旱区人工草地生产管理粗放及气候资源利用不充分等问题,探究合理的牧草种植与水氮供应模式,以充分挖掘区域牧草的生产潜力。采用3 a生(2018年播种)紫花苜蓿(简称‘苜蓿’)和无芒雀麦,分析种植模式(苜蓿与无芒雀麦混播,D1;无芒雀麦单播,D2)、施氮量(低氮量N1:60 kg·hm^-2;高氮量N2:120 kg·hm^-2)和灌水量(以灌水下限占田间持水量θ_f的百分比计,分枝期均充分灌水(75%～85%θ_f),现蕾和初花期轻度亏水W1:65%～75%θ_f、中度亏水W2:55%～65%θ_f、重度亏水W3:45%～55%θ_f,灌水上限均为85%θ_f)对牧草叶面积指数(LAI)、干物质累积量、累积截获光合有效辐射量(CIPAR)、辐射利用效率(RUE)、产量(Y)、耗水量(ET_a)、水分利用效率(WUE)和氮肥偏生产力(PFP_N)的影响。结果表明：(1)牧草LAI和...  相似文献   

不同粒度猫尾草对羔羊体外发酵特性和微生物数量的影响     

王静  孔令莹  徐建风  康静  沈振峰  刘婷 《草业学报》2023,32(3):224-233

通过Rusitec-s体外发酵系统研究不同粒度猫尾草对羔羊体外发酵参数与微生物数量的影响,选取6种不同粒度(1.00、2.36、3.35、4.75、8.00和12.50 mm)的猫尾草作为试验饲粮的纤维来源,按照猫尾草的粒度将试验分为6个处理组,每个处理4个重复,利用Rusitec-s型人工瘤胃模拟装置进行48 h体外发酵,测定养分降解率、发酵参数及发酵液中6种微生物菌群的拷贝数。结果表明：与其他处理组相比,2.36 mm组显著提高了体外中性洗涤纤维降解率(IVNDFD)、丁酸、异丁酸、戊酸、异戊酸摩尔比和溶纤维丁酸弧菌(B. f)数量(P<0.05),且显著降低总产甲烷菌(TMe)数量(P<0.05)。总菌(TB)与氨态氮(NH3-N)浓度、乙酸摩尔比呈正相关(R²=0.84,P=0.038;R²=0.88,P=0.021);B. f数量与丙酸摩尔比呈正相关(R²=0.82,P=0.045),且与pH呈负相关(R²=-0.98,P=0.001);TMe数量与体外粗蛋白质降解率(IVCP...  相似文献