SNOMED representation of explanatory knowledge in veterinary clinical pathology     

Zimmerman KL  Wilcke JR  Robertson JL  Feldman BF  Kaur T  Rees LR  Spackman KA 《Veterinary clinical pathology / American Society for Veterinary Clinical Pathology》2005,34(1):7-16

BACKGROUND: The Systematized Nomenclature of Medicine (SNOMED) is an established standard nomenclature for the expression of human and veterinary medical concepts. Nomenclature standards ease sharing of medical information, create common points of understanding, and improve data aggregation and analysis. OBJECTIVES: The objective of this study was to determine whether SNOMED adequately represented concepts relevant to veterinary clinical pathology. METHODS: Concepts were isolated from 3 different types of clinical pathology documents: 1) a textbook (Textbook), 2) the Results sections of industry pathology reports (Findings), and Discussion sections from industry pathology reports (Discussion). Concepts were matched (mapped) by 2 reviewers to semantically-equivalent SNOMED concepts. A quality score of 3 (good match), 2 (problem match), or 1 (no match) was recorded along with the SNOMED hierarchical location of each mapped concept. Results were analyzed using Cohen's Kappa statistic to assess reviewer agreement and chi-square tests to evaluate association between document type and quality score. RESULTS: The percentage of good matches was 48.3% for the Textbook, 45.4% for Findings, and 47.5% for Discussion documents, with no significant difference among documents. Of remaining concepts, 40% were partially expressed by SNOMED and 14% did not match. Mean reviewer agreement on quality score assignments was 76.8%. CONCLUSIONS: Although SNOMED representation of veterinary clinical pathology content was limited, missing and problem concepts were confined to a relatively small area of terminology. This limitation should be addressed in revisions of SNOMED to optimize SNOMED for veterinary clinical pathology applications.  相似文献   

Observations on an outbreak of anthrax in pigs in north Wales.     

D R Williams  G B Rees  M E Rogers 《The Veterinary record》1992,131(16):363-366

Nineteen pigs in a 500 sow herd died from anthrax over a period of 95 days. This paper describes some of the problems encountered and how they were dealt with, including the risks to public health, the disposal of slurry and the cleansing and disinfection of the premises after the herd was slaughtered.  相似文献   

Canine vector-borne disease pathogens in dogs from south-east Queensland and north-east Northern Territory     

Hii SF  Kopp SR  Thompson MF  O'Leary CA  Rees RL  Traub RJ 《Australian veterinary journal》2012,90(4):130-135

Objectives To determine the prevalence of canine vector‐borne diseases (CVBD: Babesia spp., Anaplasma spp., Ehrlichia spp., haemotropic mycoplasmas and Hepatozoon) in Australian dogs; namely, dogs from pounds in south‐east Queensland and an indigenous Aboriginal community in the north‐east of the Northern Territory. Design and procedure Blood samples were collected from 100 pound dogs and 130 Aboriginal community dogs and screened for the CVBD pathogens using polymerase chain reaction (PCR). All positive PCR products were sequenced for species confirmation. Results In total, 3 pound dogs and 64 Aboriginal community dogs were infected with at least one CVBD pathogen. Overall, B. vogeli was detected in 13 dogs, A. platys in 49, M. haemocanis in 23, Candidatus Mycoplasma haematoparvum in 3 and C. M. haemobos in 1 dog. Co‐infections were detected in 22 Aboriginal community dogs. Conclusions This study found B. vogeli, A. platys and haemotropic mycoplasma infections to be common in dogs in subtropical and tropical areas of Australia. This study also reports for the first time the prevalence and genetic characterisation of haemotropic mycoplasmas in dogs in Australia.  相似文献   

Targeting the detection of chronic wasting disease using the hunter harvest during early phases of an outbreak in Saskatchewan, Canada     

Rees EE  Merrill EH  Bollinger TK  Hwang YT  Pybus MJ  Coltman DW 《Preventive veterinary medicine》2012,104(1-2):149-159

Chronic wasting disease (CWD) is a fatal disease of North American cervids that was first detected in a wild, hunter-shot deer in Saskatchewan along the border with Alberta in Canada in 2000. Spatially explicit models for assessing factors affecting disease detection are needed to guide surveillance and control programs. Spatio-temporal patterns in CWD prevalence can be complicated by variation in individual infection probability and sampling biases. We assessed hunter harvest data of mule deer (Odocoileus hemionus) and white-tailed deer (Odocoileus virginianus) during the early phases of an outbreak in Saskatchewan (i.e., 2002-2007) for targeting the detection of CWD by defining (1) where to look, and (2) how much effort to use. First, we accounted for known demographic heterogeneities in infection to model the probability, P(E), that a harvested deer was infected with CWD given characteristics of the harvest location. Second, in areas where infected deer were harvested we modelled the probability, P(D), of the hunter harvest re-detecting CWD within sample units of varying size (9-54 km(2)) given the demographics of harvested deer and time since first detection in the study area. Heterogeneities in host infection were consistent with those reported elsewhere: mule deer 3.7 times >white-tailed deer, males 1.8 times>females, and quadratically related to age in both sexes. P(E) increased with number of years since the first detection in our study area (2002) and proximity to known disease sources, and also varied with distance to the South Saskatchewan River and small creek drainages, terrain ruggedness, and extent of agriculture lands within a 3 km radius of the harvest. The majority (75%) of new CWD-positive deer from our sample were found within 20 km of infected deer harvested in the previous year, while approximately 10% were greater than 40 km. P(D) modelled at 18 km(2) was best supported, but for all scales, P(D) depended on the number of harvested deer and time since the first infected deer was harvested. Within an 18 km(2) sampling unit, there was an 80% probability of detecting a CWD-positive deer with 16 harvested deer five years after the initial infected harvest. Identifying where and how much to sample to detect CWD can improve targeted surveillance programs early in the outbreak of the disease when based on hunter harvest.  相似文献   

Canine and feline atopic dermatitis: A review of the diagnostic options     

DACVDChristine A. Rees 《Clinical Techniques in Small Animal Practice》2001,16(4):230-232

Atopic dermatitis is an inherited pruritic skin disease in dogs and cats. This pruritic skin condition is due to the animal having an allergic reaction to environmental allergens. The environmental allergens that an individual dog or cat is allergic to are specific for that individual animal. Management options for affected dogs and cats include identification of the offending environmental allergens and subsequent avoidance of that allergen, or allergen-specific immunotherapy. Several diagnostic tests are available to veterinarians to try to identify these allergens. The pros and cons of each of these diagnostic tests will be addressed.  相似文献   

Two cases of abnormal genital tracts in cattle and adiscussion of their origins     

H.G. Rees D.V.M. M.R.C.V.S. N.D.A.  D.P. Boshier M.Sc Ph.D. 《New Zealand veterinary journal》2013,61(1-2):20-23

Equivalent doses of sodium selenate and sodium selenite were equally effective in preventing selenium deficiency in ewes on a diet containing a very low level of selenium.

There was a wide variation between animals in blood-level response to a single dose of selenium, and in the time for which it would satisfy ewe requirement. When ewes were fed a hay ration containing a very low level of selenium, a single dose equivalent to 5 mg selenium would give protection for at least 6 months when injected subcutaneously compared with 4 months when administered orally.

There was no significant difference in the response to subcutaneous injection of sodium selenate solution with needles of different sizes. There was no difference in effect between administration of 1 ml into the sheep's mouth or of 10 ml of a 1 in 10 dilution directly down the animal's throat.  相似文献   

High vegetative compatibility diversity of Cryphonectria parasitica infecting sweet chestnut (Castanea sativa) in Britain indicates multiple pathogen introductions     

A. Pérez-Sierra  P. Romón-Ochoa  C. Gorton  A. Lewis  H. Rees  S. Van Der Linde  J. Webber 《Plant pathology》2019,68(4):727-737

Chestnut blight, caused by Cryphonectria parasitica, was identified in Devon, UK, in December 2016. Intensive surveys detected the disease at further sites in Devon (seven), Berkshire (one), Dorset (one), Derbyshire (four) and a cluster of eight sites in southeast London. Over 570 survey samples were tested, and 227 were positive for C. parasitica by isolation and real-time PCR. A total of 227 isolates were tested for mating type, and 197 screened for vegetative compatibility group (VCG) and compared with VCGs known from mainland Europe. The same isolates were also screened for the presence of Cryphonectria hypovirus 1 (CHV-1). Eleven VCGs were identified within the UK population. Five corresponded to already known European VCGs but six were unique. The European VCGs mainly came from the Devon, Dorset, Berkshire and Derbyshire disease outbreaks, whilst unique VCGs were almost exclusively from the southeast London cluster. Both mating types were detected, but only one mating type was present at each site, with the exception of a single Devon site. Perithecia of C. parasitica were never observed at any site. CHV-1 was found in seven isolates from three different locations and was always subtype-I, which has limited hypovirulence. Therefore, although CHV-1 is associated with C. parasitica at some outbreaks, it probably has limited impact on virulence. The diversity of VCGs and their distribution at outbreak sites, together with findings of CHV-1, suggests C. parasitica has been introduced to the UK multiple times over at least two decades through international plant trade.  相似文献   

Foodfish Production Strategies Using 13‐cm and 19‐cm Hybrid Catfish, ♀Ictalurus punctatus ×  ♂Ictalurus furcatus     

Patrick Rees  Carole Engle  Nilima Renukdas 《Journal of the World Aquaculture Society》2014,45(4):412-420

Most hybrid catfish, ♀Ictalurus punctatus × ♂Ictalurus furcatus, producers stock 18‐ to 19‐cm fingerlings in single‐batch production. While stocking smaller fingerlings would be less expensive, the economic trade‐offs of using smaller fingerlings is unknown. Two sizes of hybrid catfish fingerlings (13‐cm and 19‐cm) were stocked in single‐size treatments at 9884 head/ha and a multi‐size treatment with each size stocked at 9884 head/ha (total 19,768 head/ha). In the 13‐cm and 19‐cm single‐size treatments, 87 and 98%, respectively, reached market size in one season. In the multi‐size treatment, 77% of all fish stocked reached market size, demonstrating that more than half of the 13‐cm fish reached market size in this treatment. Gross, net, and marketable yields were significantly greater in the multi‐size treatment when compared to the 13‐cm or 19‐cm single‐size treatments, but were not significantly different between the two single‐size treatments. The 19‐cm single‐size treatment resulted in greater break‐even prices and economic risk than the other two treatments. This study demonstrated that 13‐cm hybrid catfish fingerlings can be raised economically in both single‐ and multi‐size production systems in the southern USA.  相似文献   

Plasma glucose concentration is maintained during TSE infection of cattle and sheep     

Horton RA  Allison GG  Jayasena D  Stevens PR  Clifford D  Everest S  Jackman R  Moorby JM 《Veterinary research communications》2008,32(2):193-199

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Effect of scrapie incubation on the concentrations of plasma amino acids and L-lactate in infected lambs     

Allison GG  Stevens PR  Heasman L  Davis AM  Jackman R  Moorby JM 《Veterinary research communications》2008,32(8):591-597

Three groups of two weeks old growing lambs differing in PrP genotype were orally inoculated with scrapie and maintained under defined conditions until disease endpoint. Plasma concentrations of free alanine and serine, but not L-lactate increased during the final 6 months of the disease. At the same time, plasma concentrations of several essential and non-essential free amino acids decreased linearly, indicating reduced feed intake and are consistent with, but occurring before establishment, of cachexia. These observations are consistent with those reported previously from studies on cattle infected with BSE and with the hypothesis that scrapie may effect peripheral tissue metabolism.  相似文献