Characterization of Amaranthus cruentus L. seed proteins by 2-DE and LC/MS–MS: Identification and cloning of a novel late embryogenesis-abundant protein     

Enrique Maldonado-Cervantes  José A. Huerta-Ocampo  Gabriela M. Montero-Morán  Alberto Barrera-Pacheco  Eduardo Espitia-Rangel  Ana P. Barba de la Rosa 《Journal of Cereal Science》2014

Amaranth is taking great attention as an important cereal crop that could fulfill food requirements for the growing population, especially in developing countries. However, the protein composition of these seeds is not well known yet. We have used the proteomics tools to characterize amaranth seed proteome. About 400 proteins spots were resolved on two-dimensional gel electrophoresis (2-DE) and protein spots were analyzed by LC-MS/MS (liquid chromatography tandem mass spectrometry). Identified proteins were related to stress and defense responses, metabolic, respiratory, and oxide-reduction processes. One abundant spot was identified as a Late Embryogenesis Abundant (LEA) protein and the gene was cloned and characterized. The AcLEA cDNA contains a 418 bp open reading frame (ORF) encoding a polypeptide of 139 amino acids. Bioinformatics analysis showed that AcLEA belongs to LEAs Group 5. Proteomics is a powerful technique that could be used even in non-sequenced organisms such as amaranth. The obtained information reveals that amaranth seed, beyond the classical seed storage proteins, contains proteins related to protection against stress. The identification of these proteins opens the door to the application of new strategies to improve the quality of amaranth production.  相似文献   

Impacts of tillage and nutrient management on soil porosity trends in dryland agriculture     

Noemí Mateo-Marín  Àngela D. Bosch-Serra  Maria G. Molina  Rosa M. Poch 《European Journal of Soil Science》2022,73(1):e13139

  相似文献   

Fungal diversity in coffee plantation systems and in a tropical montane cloud forest in Veracruz,Mexico     

Rosa María Arias  Gabriela Heredia Abarca 《Agroforestry Systems》2014,88(5):921-933

We compared the abundance, species richness and diversity of saprobic filamentous microfungi in the forest and in coffee plantation systems (with different biophysical structures of the vegetation and agricultural management) and evaluated the degree of similarity in species composition among these sites. Soil washing was used to isolate the saprobic filamentous microfungi. Emerging colonies were quantified and transferred to tubes with culture medium and then mounted on semi-permanent slides for identification under the microscope. From 90 samples and 4,500 inoculated soils particles, 415 species were distinguished. The genera Trichoderma, Penicillium, Fusarium, Chaetomium and Humicola were the most frequent in all study sites. The transformation of the tropical montane cloud forest in coffee plantation had no significant effect on the abundance, species richness and diversity of the saprobic filamentous microfungi. Effects of the biophysical structures of the vegetation and the agricultural management of the sites were only detected at the level of dominant genera (Fusarium, Trichoderma and Penicillium) and on the evenness. The low degree of similarity among the six sites suggests the existence of a high exchange of species.  相似文献   

Mate choice of an endogeic earthworm revealed by microsatellite markers     

Marta Novo  Ana Almodóvar  Rosa M. Fernández  Mónica Gutiérrez  Darío J. Díaz Cosín 《Pedobiologia》2010,53(6):375-379

Endogeic earthworms are difficult study subjects due to the cryptic medium in which they live; thus, only the behaviour of epigeic and anecic earthworms has been studied before. We used microsatellite markers as a tool to elucidate the mate choice processes of Hormogaster elisae, an endogeic earthworm. It was shown to normally mate with two partners, preferably of the same size that are found in close proximity thereby eliminating the need for long-distance dispersion, which could explain the previously observed high genetic differentiation between populations. The genetic analyses of the sperm within each of its four spermathecae showed a uniform distribution with no signs of differential storage of sperm from different partners.  相似文献   

Tracking Anthropogenic Inputs in Barigui River, Brazil Using Biomarkers     

Sandro Froehner  Daniele Botelho Souza  Karina Scurupa Machado  Edson Cordova da Rosa 《Water, air, and soil pollution》2010,210(1-4):33-41

The Barigüi River watershed is located in the metropolitan region of Curitiba, Southern Brazil, passing through several neighboring counties. In recent years, due to growth and disorderly occupation along the river, in addition to lack of sanitation, the Barigüi River suffered a very large inflow of untreated domestic wastewater. Current programs to monitor the watershed use traditional physical–chemical parameters. Here, the presence of some molecular tracers found in domestic effluents was investigated, such as caffeine and coprostanol at some selected sites in Barigüi River. Caffeine is highly soluble in water and its presence in water bodies is due to the disposal of untreated sewage. Caffeine is eliminated in the urine (approximately 0.5% to 10% of the consumption). The samples were collected in three campaigns, two in dry weather and another during a week in the rainy season. The results showed that caffeine concentration ranged between zero and 753.5 μg g^?1. Higher values were found on rainy days. Caffeine showed a positive correlation between BOD and nitrate; it also showed a positive correlation with coprostanol, a fecal biomarker. Finally, caffeine has been shown to be a good parameter to determine the contamination by domestic wastewater.  相似文献   

A Modeling Study of the Impact of a Power Plant on Ground-Level Ozone in Relation to its Location: Southwestern Spain as a Case Study     

Nuria Castell  Enrique Mantilla  Ariel F. Stein  Rosa Salvador  Millán Millán 《Water, air, and soil pollution》2010,209(1-4):61-79

The impact of atmospheric industrial emissions on secondary pollutant formation depends on many factors; one of the most important being the environmental setting in which the industry is located. The environmental setting affects an industry’s impact on ozone levels through both the air mass dispersion (a function of topography and wind patterns) and the emissions of organic volatile compounds (VOC) and nitrogen oxides (NO _x ) in the area. This model-based study shows how the sensitivity of surface ozone changes with the choice of source location. For the analysis, seven points distributed along the Tinto–Guadalquivir Basin (in the Southwestern Iberian Peninsula) were selected. This area is characterized by the close proximity of natural environments and crop fields to cities, roads, and industrial areas with high NO _x emissions. Natural VOC emissions represent more than 60% of the total non-methane volatile organic compounds emitted in the study area. The results reveal that the largest increases in ozone levels are produced when the industry is located both far away from NO _x emission sources and near to biogenic VOC emissions. Furthermore, the highest increases over the hourly and 8-hourly maximums, as well as the highest accumulated daily values, are found in areas characterized by high VOC/NO _x emission ratios and NO _x sensitivity. The study of the recurrent meteorological patterns along with the distribution of chemical indicators of the O₃–NO _x –VOC sensitivity allows the determination of the industry’s geographical impact on ozone levels. This information enables air quality managers to decide the future location of an industry minimizing its impact on smog levels.  相似文献   

Prediction of parental combination for introduction of stay-green associated loci in wheat     

Henrique de Souza Luche  José Antonio Gonzalez da Silva  Rafael Nornberg  Emilio Ghisleni Arenhardt  Vanderlei da Rosa Caetano  Luciano Carlos da Maia  Antonio Costa de Oliveira 《Journal of Crop Science and Biotechnology》2017,20(2):73-80

In wheat, the increase of yield and stability associated traits can be achieved by combining parents containing the stay-green trait and favorable alleles for grain yield. The aim of this work was to analyze the genetic dissimilarity between wheat lines from stay-green and synchronized maturation groups and elite cultivars. Moreover, to propose promising combinations seeking the selection of high-grain yield and high bread-making quality genotypes containing stay-green trait. The experiment was conducted in a randomized block design with three replications in 2003, 2004, and 2005, using sister-lines with the presence and absence of stay-green trait and elite cultivars. Genetic variability exists among wheat strains from the synchronized stay-green maturation group and elite cultivars. Genotypes of maturation group stay-green obtained an average performance superior to the synchronized group. Crosses between stay-green lines and the CEP 29 and BRS 177 cultivars are promising in the selection of genotypes carrying the stay-green trait with high yield and bread-making quality.  相似文献   

Interaction of parasitism and nutrition and their effects on production and clinical parameters in goats.     

H D Blackburn  J L Rocha  E P Figueiredo  M E Berne  L S Vieira  A R Cavalcante  J S Rosa 《Veterinary parasitology》1991,40(1-2):99-112

Weaned wether goats (n = 144) approximately 6 months of age were placed in a 2 x 3 factorial design experiment for 5 months to test the main effects and interaction of two levels of nutrition (growth + maintenance, NUT1; twice growth + maintenance, NUT2) and three levels of Haemonchus contortus burden (0, 500 and 2000 larvae administered every 2 weeks: W0, W500 W2000, respectively) on weight, feed intake, level of infection and packed cell volume (PCV). The rationale for the experimental design was based on the lack of information concerning the interaction between nutritional status and worm burden. Results indicated significant effects of worm burden levels on PCV, faecal egg contents (eggs per gram of feces (EPG)), actual worm numbers, feed intake and efficiency of feed utilization. Nutrition x worm burden interactions were also significant for PCV and EPG. However, the differences detected for PCV and actual worm numbers did not translate into large or consistent differences in body weight. Goats on NUT2, after an initial period, showed little difference in body weight, irrespective of worm burden. Within the NUT1 level, W0 kids weighed more than W500 or W2000 kids throughout the study. Although not statistically significant, this constitutes a trend towards an interaction between nutrition and worm burden. In both nutrition levels, there were no body weight differences between W500 and W2000 until the last 14 days. Feed intake was depressed in the first 3 months of the experiment for infected animals, but was subsequently followed by a compensatory reaction. Lower establishment rates, based on actual worm counts, were observed for the higher infection level, but in both infection levels establishment rates tended to decrease with time. Nutrition was found to be more important to counteract the consequences of a parasitic infection than to counteract the establishment of that same infection.  相似文献   

Initial selection steps in olive breeding programs     

Lorenzo León  Leonardo Velasco  Raúl de la Rosa 《Euphytica》2015,201(3):453-462

  相似文献   

Breeding maize for traditional and organic agriculture     

Pedro Revilla  Jose Ignacio Ruiz de Galarreta  Rosa Ana Malvar  Arsenio Landa  Amando Ordás 《Euphytica》2015,205(1):219-230

  相似文献